Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0269
         (579 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    25   0.35 
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    24   1.1  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    24   1.1  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    22   3.3  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   4.3  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    22   4.3  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   7.6  

>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 25.4 bits (53), Expect = 0.35
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = +2

Query: 467 AASIPTSTATQLPXHRPTLPWXSQPNAANXHP 562
           AASI  + AT LP H P  P     + A  HP
Sbjct: 147 AASIFHAAATSLPLHYPPPPPVYTHHYARYHP 178


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 6/15 (40%), Positives = 13/15 (86%)
 Frame = +1

Query: 58  YFYWLGFVHSTYAHK 102
           YF++L ++++TY+ K
Sbjct: 87  YFFYLSYIYTTYSRK 101


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 6/15 (40%), Positives = 13/15 (86%)
 Frame = +1

Query: 58  YFYWLGFVHSTYAHK 102
           YF++L ++++TY+ K
Sbjct: 43  YFFYLSYIYTTYSRK 57


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 260 KASVARDIGVPESTLRGWCKN 322
           +  VA  I +PES ++ W KN
Sbjct: 99  REEVALKINLPESRVQVWFKN 119


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +2

Query: 479 PTSTATQLPXHR 514
           PT T T LP HR
Sbjct: 370 PTKTRTNLPTHR 381


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 260 KASVARDIGVPESTLRGWCKN 322
           +  VA  I +PES ++ W KN
Sbjct: 157 REEVAVKINLPESRVQVWFKN 177


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 91  YAHKSDNDCPV*NCK 135
           Y H++ NDC V  C+
Sbjct: 64  YCHENINDCKVNPCE 78


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,980
Number of Sequences: 336
Number of extensions: 2163
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14412858
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)