Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0268
         (716 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0479 - 10775382-10775656,10776513-10777535,10777725-107784...    31   0.91 
01_06_1179 - 35161229-35162368                                         28   8.5  

>02_02_0479 -
           10775382-10775656,10776513-10777535,10777725-10778461,
           10779008-10779155,10779331-10779856
          Length = 902

 Score = 31.1 bits (67), Expect = 0.91
 Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
 Frame = -2

Query: 292 VTPIGPFDWMPVPCRLVXP-NAGAXPVYGLSCHGTRTVSFW 173
           V P  P  W P P  +V P NAG  PV  +  HG   V+ W
Sbjct: 855 VLPSVPKAWCPKPLMVVAPANAGTYPV-AIFLHGCNMVNSW 894


>01_06_1179 - 35161229-35162368
          Length = 379

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = -3

Query: 354 KDRRYNRRTSLELLVLRSGSSLHPSARLTGCQ 259
           K RR +RR S++L    SGSS+  S   TGC+
Sbjct: 111 KSRRRHRRRSVKLAPSVSGSSVLSSPVSTGCR 142


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,272,660
Number of Sequences: 37544
Number of extensions: 287257
Number of successful extensions: 559
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 548
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 558
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1862792824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)