Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0262
         (758 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q16ZY3 Cluster: Putative uncharacterized protein; n=1; ...    34   4.4  
UniRef50_A0C382 Cluster: Chromosome undetermined scaffold_146, w...    33   7.7  

>UniRef50_Q16ZY3 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 929

 Score = 33.9 bits (74), Expect = 4.4
 Identities = 26/96 (27%), Positives = 34/96 (35%), Gaps = 1/96 (1%)
 Frame = -1

Query: 494 TETYNKINPSS*CC-GV*AAAPXXXXXXXXXXRGI*CHQSRERPLPXDSALCKFL*TSFL 318
           T T   + PSS CC G     P              C     +  P     C    T+  
Sbjct: 671 TTTVANLGPSSSCCSGCKPIEPQTNGGATSSALAARCLHHAPKATPKVLCKCGLPLTAAP 730

Query: 317 VYAVSLHSSAPGTRYSHCIRCAARTHYNHNRNSRTR 210
             + S  S+AP +   HC RCAA        NS+T+
Sbjct: 731 TASSSSSSAAPSSAPQHCPRCAAAISAAELENSKTK 766


>UniRef50_A0C382 Cluster: Chromosome undetermined scaffold_146,
           whole genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_146,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 198

 Score = 33.1 bits (72), Expect = 7.7
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = +2

Query: 635 KKSCIVNFLLDNIIHNLVLKLRFIMCYLSVLVTKSCHVFSK 757
           K  C ++  + NI  N ++ + +I+ YL  +VTKSC   +K
Sbjct: 154 KHMCFLSMTIKNIPINTIIMIYYIIVYLLGMVTKSCRNLNK 194


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 619,119,901
Number of Sequences: 1657284
Number of extensions: 10380067
Number of successful extensions: 22306
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 21759
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22292
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62969581935
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)