Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0262
         (758 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81083-4|CAB03102.1|  645|Caenorhabditis elegans Hypothetical pr...    28   6.3  
Z93387-5|CAB54299.3|  134|Caenorhabditis elegans Hypothetical pr...    28   8.3  

>Z81083-4|CAB03102.1|  645|Caenorhabditis elegans Hypothetical
           protein F44F1.5 protein.
          Length = 645

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = -1

Query: 320 LVYAVSLHSSAPGTRYSHCIRCAARTHYNHNRNSRT 213
           L+   S+HS    TR  HC  C +  +  +  NS T
Sbjct: 263 LIPKYSVHSKVLDTRVIHCFNCLSEKNEQYTYNSAT 298


>Z93387-5|CAB54299.3|  134|Caenorhabditis elegans Hypothetical
           protein T02E9.5 protein.
          Length = 134

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = +3

Query: 345 ECTIRRQRPFPGLVASYAPXEGQIACSTQWSGCSD 449
           + T+R +  F G +A YAP  G I CS Q++ C D
Sbjct: 25  DATVRDKTEFCGTMAQYAP-TGDIYCS-QFAMCCD 57


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,385,443
Number of Sequences: 27780
Number of extensions: 250788
Number of successful extensions: 547
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 547
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)