Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0260
(661 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 294 8e-81
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 293 1e-80
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 293 1e-80
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 166 2e-42
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 159 4e-40
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 97 2e-21
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 48 1e-06
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 42 6e-05
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 42 6e-05
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 40 4e-04
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 38 0.001
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 31 0.11
SPAC22F8.08 |||COPII vesicle coat protein |Schizosaccharomyces p... 29 0.78
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 27 1.8
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 27 3.2
SPBC24C6.08c |||vesicle coat protein|Schizosaccharomyces pombe|c... 25 7.3
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 25 7.3
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 25 7.3
SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces pomb... 25 7.3
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 25 9.7
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 294 bits (721), Expect = 8e-81
Identities = 138/155 (89%), Positives = 144/155 (92%)
Frame = +2
Query: 44 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 223
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 224 DKLKAERXRRFTIDIALWKFETSKYYVTIIDAPXHRDFIKNMITGTSQADCAVLIVAAGT 403
DKLKAER R TIDIALWKFET KY VT+IDAP HRDFIKNMITGTSQADCAVLI+ GT
Sbjct: 61 DKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAVLIIGGGT 120
Query: 404 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKM 508
GEFEAGISK+GQTREHALLA+TLGVKQLIV VNKM
Sbjct: 121 GEFEAGISKDGQTREHALLAYTLGVKQLIVAVNKM 155
Score = 67.3 bits (157), Expect = 2e-12
Identities = 27/43 (62%), Positives = 36/43 (83%)
Frame = +1
Query: 526 YSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEP 654
+S+ RFEEI KE S++IKK+G+NP V FVP+SG+ GDNM+EP
Sbjct: 160 WSQARFEEIVKETSNFIKKVGFNPKTVPFVPVSGFQGDNMIEP 202
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 293 bits (720), Expect = 1e-80
Identities = 137/155 (88%), Positives = 144/155 (92%)
Frame = +2
Query: 44 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 223
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 224 DKLKAERXRRFTIDIALWKFETSKYYVTIIDAPXHRDFIKNMITGTSQADCAVLIVAAGT 403
DKLKAER R TIDIALWKFET KY VT+IDAP HRDFIKNMITGTSQADCA+LI+ GT
Sbjct: 61 DKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGT 120
Query: 404 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKM 508
GEFEAGISK+GQTREHALLA+TLGVKQLIV VNKM
Sbjct: 121 GEFEAGISKDGQTREHALLAYTLGVKQLIVAVNKM 155
Score = 67.3 bits (157), Expect = 2e-12
Identities = 27/43 (62%), Positives = 36/43 (83%)
Frame = +1
Query: 526 YSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEP 654
+S+ RFEEI KE S++IKK+G+NP V FVP+SG+ GDNM+EP
Sbjct: 160 WSQARFEEIVKETSNFIKKVGFNPKTVPFVPVSGFQGDNMIEP 202
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 293 bits (720), Expect = 1e-80
Identities = 137/155 (88%), Positives = 144/155 (92%)
Frame = +2
Query: 44 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 223
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 224 DKLKAERXRRFTIDIALWKFETSKYYVTIIDAPXHRDFIKNMITGTSQADCAVLIVAAGT 403
DKLKAER R TIDIALWKFET KY VT+IDAP HRDFIKNMITGTSQADCA+LI+ GT
Sbjct: 61 DKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGT 120
Query: 404 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKM 508
GEFEAGISK+GQTREHALLA+TLGVKQLIV VNKM
Sbjct: 121 GEFEAGISKDGQTREHALLAYTLGVKQLIVAVNKM 155
Score = 67.3 bits (157), Expect = 2e-12
Identities = 27/43 (62%), Positives = 36/43 (83%)
Frame = +1
Query: 526 YSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEP 654
+S+ RFEEI KE S++IKK+G+NP V FVP+SG+ GDNM+EP
Sbjct: 160 WSQARFEEIVKETSNFIKKVGFNPKTVPFVPVSGFQGDNMIEP 202
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 166 bits (404), Expect = 2e-42
Identities = 75/151 (49%), Positives = 105/151 (69%)
Frame = +2
Query: 56 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 235
K H+NIV IGHVD+GKST G++++ G +DKRT+EK E+EA+E GK S+ +W LD
Sbjct: 236 KEHVNIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTS 295
Query: 236 AERXRRFTIDIALWKFETSKYYVTIIDAPXHRDFIKNMITGTSQADCAVLIVAAGTGEFE 415
ER + T+++ FET +++DAP H+ ++ NMI G SQAD VL+++A GEFE
Sbjct: 296 EEREKGKTVEVGRAYFETEHRRFSLLDAPGHKGYVTNMINGASQADIGVLVISARRGEFE 355
Query: 416 AGISKNGQTREHALLAFTLGVKQLIVGVNKM 508
AG + GQTREHA+LA T G+ L+V +NKM
Sbjct: 356 AGFERGGQTREHAVLARTQGINHLVVVINKM 386
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 159 bits (385), Expect = 4e-40
Identities = 75/151 (49%), Positives = 99/151 (65%)
Frame = +2
Query: 56 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 235
K +++VV GHVDSGKST G ++++ G I+ R+++K EA GKGSF YAW+LD +
Sbjct: 175 KPVVHLVVTGHVDSGKSTMLGRIMFELGEINSRSMQKLHNEAANSGKGSFSYAWLLDTTE 234
Query: 236 AERXRRFTIDIALWKFETSKYYVTIIDAPXHRDFIKNMITGTSQADCAVLIVAAGTGEFE 415
ER R T+D+A FE+ K I DAP HRDFI MI G S AD AVL+V + FE
Sbjct: 235 EERARGVTMDVASTTFESDKKIYEIGDAPGHRDFISGMIAGASSADFAVLVVDSSQNNFE 294
Query: 416 AGISKNGQTREHALLAFTLGVKQLIVGVNKM 508
G +NGQTREHA L LG+ +++V VNK+
Sbjct: 295 RGFLENGQTREHAYLLRALGISEIVVSVNKL 325
Score = 41.1 bits (92), Expect = 1e-04
Identities = 20/43 (46%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Frame = +1
Query: 526 YSEPRFEEIKKEVSSY-IKKIGYNPAAVAFVPISGWHGDNMLE 651
+SE RF+EIK VS + IK +G+ + V FVPIS G N+++
Sbjct: 330 WSEDRFQEIKNIVSDFLIKMVGFKTSNVHFVPISAISGTNLIQ 372
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 97.1 bits (231), Expect = 2e-21
Identities = 59/153 (38%), Positives = 85/153 (55%)
Frame = +2
Query: 50 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 229
++K H+NI IGHVD GK+T T I KC ++G+ SF +DK
Sbjct: 49 RKKPHVNIGTIGHVDHGKTTLTA-AITKC--------------LSDLGQASFMDYSQIDK 93
Query: 230 LKAERXRRFTIDIALWKFETSKYYVTIIDAPXHRDFIKNMITGTSQADCAVLIVAAGTGE 409
E+ R TI A ++ET+ + +D P H D+IKNMITG + D A+++V+A G+
Sbjct: 94 APEEKARGITISSAHVEYETANRHYAHVDCPGHADYIKNMITGAATMDGAIIVVSATDGQ 153
Query: 410 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKM 508
QTREH LLA +GVKQ++V +NK+
Sbjct: 154 MP-------QTREHLLLARQVGVKQIVVYINKV 179
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 48.0 bits (109), Expect = 1e-06
Identities = 34/113 (30%), Positives = 49/113 (43%)
Frame = +2
Query: 68 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERX 247
N+ +I H+D+GK+T T ++Y G F + G V+D L AER
Sbjct: 30 NVGIIAHIDAGKTTLTEKMLYYGG---------FTSHFGNVDTGDT----VMDYLPAERQ 76
Query: 248 RRFTIDIALWKFETSKYYVTIIDAPXHRDFIKNMITGTSQADCAVLIVAAGTG 406
R TI+ A F + +ID P H DF + + D AV I+ G
Sbjct: 77 RGITINSAAISFTWRNQRINLIDTPGHADFTFEVERSVAVLDGAVAIIDGSAG 129
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 42.3 bits (95), Expect = 6e-05
Identities = 37/119 (31%), Positives = 54/119 (45%), Gaps = 3/119 (2%)
Frame = +2
Query: 44 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGID--KRTIEKF-EKEAQEMGKGSFKYA 214
MGK N+ VI HVD GKST T L+ K G I K +F + A E +G +
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTRADEQERGVTIKS 72
Query: 215 WVLDKLKAERXRRFTIDIALWKFETSKYYVTIIDAPXHRDFIKNMITGTSQADCAVLIV 391
+ L AE D+ + + + V +ID+P H DF + D A+++V
Sbjct: 73 TAI-SLFAEMTDDDMKDMK-EPADGTDFLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 42.3 bits (95), Expect = 6e-05
Identities = 37/119 (31%), Positives = 54/119 (45%), Gaps = 3/119 (2%)
Frame = +2
Query: 44 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGID--KRTIEKF-EKEAQEMGKGSFKYA 214
MGK N+ VI HVD GKST T L+ K G I K +F + A E +G +
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTRADEQERGVTIKS 72
Query: 215 WVLDKLKAERXRRFTIDIALWKFETSKYYVTIIDAPXHRDFIKNMITGTSQADCAVLIV 391
+ L AE D+ + + + V +ID+P H DF + D A+++V
Sbjct: 73 TAI-SLFAEMTDDDMKDMK-EPADGTDFLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 39.5 bits (88), Expect = 4e-04
Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 4/117 (3%)
Frame = +2
Query: 68 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERX 247
N VI H+D GKST + ++ G I++ + F LDKL+ ER
Sbjct: 60 NWAVIAHIDHGKSTLSDCILKLTGVINEHNF-----------RNQF-----LDKLEVERR 103
Query: 248 RRFTIDIA----LWKFETSKYYVTIIDAPXHRDFIKNMITGTSQADCAVLIVAAGTG 406
R T+ ++ + Y + +ID P H DF ++ + + +L+V A G
Sbjct: 104 RGITVKAQTCSMIYYYHGQSYLLNLIDTPGHVDFRAEVMHSLAACEGCILLVDASQG 160
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 38.3 bits (85), Expect = 0.001
Identities = 42/147 (28%), Positives = 63/147 (42%), Gaps = 19/147 (12%)
Frame = +2
Query: 68 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERX 247
NI + H+DSGK+T T ++Y G I K+ E+ +G +D ++ ER
Sbjct: 61 NIGISAHIDSGKTTFTERVLYYTGRI---------KDIHEV-RGKDNVGAKMDFMELERE 110
Query: 248 RRFTIDIAL----WK---------------FETSKYYVTIIDAPXHRDFIKNMITGTSQA 370
+ TI A W+ FE S Y + IID P H DF +
Sbjct: 111 KGITIQSAATHCTWERTVDQIEANEKQKTDFEKS-YNINIIDTPGHIDFTIEVERALRVL 169
Query: 371 DCAVLIVAAGTGEFEAGISKNGQTREH 451
D AVL++ A +G I+ + Q R +
Sbjct: 170 DGAVLVLCAVSGVQSQTITVDRQMRRY 196
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 31.5 bits (68), Expect = 0.11
Identities = 29/116 (25%), Positives = 47/116 (40%), Gaps = 3/116 (2%)
Frame = +2
Query: 68 NIVVIGHVDSGKSTTTGHLIYKCGGIDKR---TIEKFEKEAQEMGKGSFKYAWVLDKLKA 238
N ++ HVD GK+T L+ G I + T+ + E+ +G + K A
Sbjct: 21 NFTLLAHVDHGKTTLADSLLASNGIISSKLAGTVRFLDFREDEITRG------ITMKSSA 74
Query: 239 ERXRRFTIDIALWKFETSKYYVTIIDAPXHRDFIKNMITGTSQADCAVLIVAAGTG 406
I K Y + +ID+P H DF + + + D A ++V A G
Sbjct: 75 ISLFFKVISQNDEKRVEKDYLINLIDSPGHVDFSSEVSSASRLCDGAFVLVDAVEG 130
>SPAC22F8.08 |||COPII vesicle coat protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 926
Score = 28.7 bits (61), Expect = 0.78
Identities = 27/79 (34%), Positives = 37/79 (46%)
Frame = +2
Query: 389 VAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMIPLNHHTVSPDLRKSRRKYP 568
VA GT E GI NG E+A+ A +I V++ P++H + KSRR+YP
Sbjct: 47 VAEGTAE---GIVSNG---EYAVGAMGAAPTNIIGSVDQQPPVSHTS-----HKSRRQYP 95
Query: 569 HTSRRLATTQLLSLSCPFL 625
L T S + P L
Sbjct: 96 AEVFELTNTLAASPAPPSL 114
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 27.5 bits (58), Expect = 1.8
Identities = 35/165 (21%), Positives = 62/165 (37%), Gaps = 8/165 (4%)
Frame = +2
Query: 38 PKMGKEKTHINIVVIGHVDSGKSTTTG-----HLIYKCGGIDKRTIEKFEKEAQEMGKGS 202
P + + INI IGHV GKST H + +++ K ++ K S
Sbjct: 15 PAIISRQATINIGTIGHVAHGKSTVVKAISGVHTVRFKNELERNITIKLGYANAKIYKCS 74
Query: 203 FKYA---WVLDKLKAERXRRFTIDIALWKFETSKYYVTIIDAPXHRDFIKNMITGTSQAD 373
+ + + +I ++ V+ +D P H + M+ G + D
Sbjct: 75 NEECPRPGCYRSYSSNKEDHPPCEICNSPMNLVRH-VSFVDCPGHDILMATMLNGAAVMD 133
Query: 374 CAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKM 508
A+L++A QT EH + +K +I+ NK+
Sbjct: 134 AALLLIAGNES------CPQPQTSEHLAAIEIMQLKHIIILQNKV 172
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 26.6 bits (56), Expect = 3.2
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 308 IIDAPXHRDFIKNMITGTSQADCAVLIV 391
IID P H F GTS + A+L++
Sbjct: 553 IIDTPGHESFTNLRSRGTSLCNIAILVI 580
>SPBC24C6.08c |||vesicle coat protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 367
Score = 25.4 bits (53), Expect = 7.3
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +2
Query: 527 TVSPDLRKSRRKYPHTSRRLATTQLLSLSC 616
+ +PD+ ++PHT +R +T + L + C
Sbjct: 145 STNPDVLYMSSQHPHTQQRYSTLKRLMVRC 174
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 25.4 bits (53), Expect = 7.3
Identities = 22/110 (20%), Positives = 44/110 (40%), Gaps = 2/110 (1%)
Frame = +2
Query: 68 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYA--WVLDKLKAE 241
+ +V GH+ GKS L+Y + + + S +Y L++ +
Sbjct: 142 SFIVAGHLHHGKSALLDLLVYYT-----------HPDTKPPKRRSLRYTDTHYLERERVM 190
Query: 242 RXRRFTIDIALWKFETSKYYVTIIDAPXHRDFIKNMITGTSQADCAVLIV 391
+ + +A+ + + ID P H DF+ + + +D VL+V
Sbjct: 191 SIKSTPLTLAVSDMKGKTFAFQCIDTPGHVDFVDEVAAPMAISDGVVLVV 240
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 25.4 bits (53), Expect = 7.3
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Frame = +2
Query: 146 DKRTIEKFE--KEAQEMGKGS-FKYAWVLDKLKAERXRRFTIDI 268
+K +E E K GK S ++AWV K A+ R+F IDI
Sbjct: 563 EKNDLEAIEAAKNFHVNGKPSPTRFAWVNGKFWAQWLRKFDIDI 606
>SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 662
Score = 25.4 bits (53), Expect = 7.3
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = -3
Query: 230 VCPIPKHI*RILYPFPGPPSRTSRWYVCQYHHICRSSDQWWWT 102
V +PK I I++ F P S S C+Y S D W T
Sbjct: 31 VLNLPKEILIIIFSFLDPRSLLSAQCTCKYWKKLLSDDLSWRT 73
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 25.0 bits (52), Expect = 9.7
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -3
Query: 185 PGPPSRTSRWYVCQYHHIC 129
P PP +T + Y QY+ +C
Sbjct: 8 PAPPKKTLQLYTPQYYGLC 26
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,695,864
Number of Sequences: 5004
Number of extensions: 54883
Number of successful extensions: 198
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 194
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 299817502
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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