Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0260
(661 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 274 4e-74
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 274 4e-74
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 274 4e-74
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 274 4e-74
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 161 4e-40
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 159 2e-39
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 91 8e-19
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 82 3e-16
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 47 1e-05
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 46 2e-05
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 46 2e-05
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 42 5e-04
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 40 0.001
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 40 0.002
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 38 0.006
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 31 0.51
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 31 0.51
At5g13650.2 68418.m01585 elongation factor family protein contai... 30 1.2
At5g13650.1 68418.m01584 elongation factor family protein contai... 30 1.2
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 30 1.6
At5g44785.2 68418.m05490 expressed protein contains Pfam PF05329... 29 3.6
At5g44785.1 68418.m05489 expressed protein contains Pfam PF05329... 29 3.6
At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein s... 28 4.8
At5g51710.1 68418.m06413 K+ efflux antiporter, putative (KEA5) M... 28 6.3
At1g76530.1 68414.m08906 auxin efflux carrier family protein con... 28 6.3
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 274 bits (671), Expect = 4e-74
Identities = 131/155 (84%), Positives = 138/155 (89%)
Frame = +2
Query: 44 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 223
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 224 DKLKAERXRRFTIDIALWKFETSKYYVTIIDAPXHRDFIKNMITGTSQADCAVLIVAAGT 403
DKLKAER R TIDIALWKFET+KYY T+IDAP HRDFIKNMITGTSQADCAVLI+ + T
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 404 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKM 508
G FEAGISK+GQTREHALLAFTLGVKQ+I NKM
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKM 155
Score = 74.5 bits (175), Expect = 6e-14
Identities = 31/48 (64%), Positives = 40/48 (83%)
Frame = +1
Query: 508 DSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE 651
D+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E
Sbjct: 156 DATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIE 203
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 274 bits (671), Expect = 4e-74
Identities = 131/155 (84%), Positives = 138/155 (89%)
Frame = +2
Query: 44 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 223
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 224 DKLKAERXRRFTIDIALWKFETSKYYVTIIDAPXHRDFIKNMITGTSQADCAVLIVAAGT 403
DKLKAER R TIDIALWKFET+KYY T+IDAP HRDFIKNMITGTSQADCAVLI+ + T
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 404 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKM 508
G FEAGISK+GQTREHALLAFTLGVKQ+I NKM
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKM 155
Score = 74.5 bits (175), Expect = 6e-14
Identities = 31/48 (64%), Positives = 40/48 (83%)
Frame = +1
Query: 508 DSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE 651
D+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E
Sbjct: 156 DATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIE 203
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 274 bits (671), Expect = 4e-74
Identities = 131/155 (84%), Positives = 138/155 (89%)
Frame = +2
Query: 44 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 223
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 224 DKLKAERXRRFTIDIALWKFETSKYYVTIIDAPXHRDFIKNMITGTSQADCAVLIVAAGT 403
DKLKAER R TIDIALWKFET+KYY T+IDAP HRDFIKNMITGTSQADCAVLI+ + T
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 404 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKM 508
G FEAGISK+GQTREHALLAFTLGVKQ+I NKM
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKM 155
Score = 74.5 bits (175), Expect = 6e-14
Identities = 31/48 (64%), Positives = 40/48 (83%)
Frame = +1
Query: 508 DSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE 651
D+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E
Sbjct: 156 DATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIE 203
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 274 bits (671), Expect = 4e-74
Identities = 131/155 (84%), Positives = 138/155 (89%)
Frame = +2
Query: 44 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 223
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 224 DKLKAERXRRFTIDIALWKFETSKYYVTIIDAPXHRDFIKNMITGTSQADCAVLIVAAGT 403
DKLKAER R TIDIALWKFET+KYY T+IDAP HRDFIKNMITGTSQADCAVLI+ + T
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 404 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKM 508
G FEAGISK+GQTREHALLAFTLGVKQ+I NKM
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKM 155
Score = 74.5 bits (175), Expect = 6e-14
Identities = 31/48 (64%), Positives = 40/48 (83%)
Frame = +1
Query: 508 DSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE 651
D+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E
Sbjct: 156 DATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIE 203
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 161 bits (391), Expect = 4e-40
Identities = 71/151 (47%), Positives = 105/151 (69%), Gaps = 1/151 (0%)
Frame = +2
Query: 59 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 238
+ +N+ ++GHVDSGKST +G L++ G I ++ + K+EKEA+ GKGSF YAW LD+
Sbjct: 238 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKQMHKYEKEAKLQGKGSFAYAWALDESAE 297
Query: 239 ERXRRFTIDIALWKFETSKYYVTIIDAPXHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 418
ER R T+ +A+ F + +++V ++D+P H+DF+ NMI G +QAD A+L++ A G FEA
Sbjct: 298 ERERGITMTVAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAILVIDASVGAFEA 357
Query: 419 GISK-NGQTREHALLAFTLGVKQLIVGVNKM 508
G GQTREHA + GV+Q+IV +NKM
Sbjct: 358 GFDNLKGQTREHARVLRGFGVEQVIVAINKM 388
Score = 33.1 bits (72), Expect = 0.17
Identities = 11/41 (26%), Positives = 26/41 (63%)
Frame = +1
Query: 526 YSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNML 648
YS+ RF+ IK+ V S+++ + +++ ++P+S N++
Sbjct: 393 YSKERFDLIKQHVGSFLQSCRFKDSSLTWIPLSAMENQNLV 433
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 159 bits (386), Expect = 2e-39
Identities = 73/152 (48%), Positives = 105/152 (69%)
Frame = +2
Query: 53 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 232
+K H+N+V IGHVD+GKST G +++ G +D R I+K+EKEA++ + S+ A+++D
Sbjct: 98 KKRHLNVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRESWYMAYIMDTN 157
Query: 233 KAERXRRFTIDIALWKFETSKYYVTIIDAPXHRDFIKNMITGTSQADCAVLIVAAGTGEF 412
+ ER + T+++ FET TI+DAP H+ ++ NMI+G SQAD VL+++A GEF
Sbjct: 158 EEERLKGKTVEVGRAHFETESTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEF 217
Query: 413 EAGISKNGQTREHALLAFTLGVKQLIVGVNKM 508
E G + GQTREH LA TLGV +LIV VNKM
Sbjct: 218 ETGYERGGQTREHVQLAKTLGVSKLIVVVNKM 249
Score = 37.9 bits (84), Expect = 0.006
Identities = 20/51 (39%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Frame = +1
Query: 496 SKQNDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAA-VAFVPISGWHGDNM 645
+K +D T +S+ R++EI++++ ++K GYN V F+PISG G NM
Sbjct: 247 NKMDDPTVN-WSKERYDEIEQKMVPFLKASGYNTKKDVVFLPISGLMGKNM 296
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 90.6 bits (215), Expect = 8e-19
Identities = 54/155 (34%), Positives = 79/155 (50%)
Frame = +2
Query: 41 KMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 220
K ++K H+NI IGHVD GK+T T L I +K+++
Sbjct: 72 KFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDE--------------- 116
Query: 221 LDKLKAERXRRFTIDIALWKFETSKYYVTIIDAPXHRDFIKNMITGTSQADCAVLIVAAG 400
+D ER R TI+ A ++ET + +D P H D++KNMITG +Q D A+L+V+
Sbjct: 117 IDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGA 176
Query: 401 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNK 505
G QT+EH LLA +GV ++V +NK
Sbjct: 177 DGPMP-------QTKEHILLAKQVGVPDMVVFLNK 204
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 82.2 bits (194), Expect = 3e-16
Identities = 53/153 (34%), Positives = 76/153 (49%)
Frame = +2
Query: 50 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 229
+ K H+N+ IGHVD GK+T T + K E GK +DK
Sbjct: 63 RNKPHVNVGTIGHVDHGKTTLTAAIT---------------KVLAEEGKAKAIAFDEIDK 107
Query: 230 LKAERXRRFTIDIALWKFETSKYYVTIIDAPXHRDFIKNMITGTSQADCAVLIVAAGTGE 409
E+ R TI A ++ET+K + +D P H D++KNMITG +Q D +L+V+ G
Sbjct: 108 APEEKKRGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGP 167
Query: 410 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKM 508
QT+EH LLA +GV L+ +NK+
Sbjct: 168 MP-------QTKEHILLARQVGVPSLVCFLNKV 193
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 46.8 bits (106), Expect = 1e-05
Identities = 34/113 (30%), Positives = 51/113 (45%)
Frame = +2
Query: 68 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERX 247
NI ++ HVD GK+T HLI GG + GK F +D L E+
Sbjct: 11 NICILAHVDHGKTTLADHLIASSGG--------GVLHPRLAGKLRF-----MDYLDEEQR 57
Query: 248 RRFTIDIALWKFETSKYYVTIIDAPXHRDFIKNMITGTSQADCAVLIVAAGTG 406
R T+ + + Y + +ID+P H DF + T +D A+++V A G
Sbjct: 58 RAITMKSSSISLKYKDYSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEG 110
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 46.4 bits (105), Expect = 2e-05
Identities = 37/128 (28%), Positives = 57/128 (44%)
Frame = +2
Query: 68 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERX 247
NI + H+DSGK+T T +++ G I E E ++ G G+ +D + ER
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRIH----EIHEVRGRD-GVGA-----KMDSMDLERE 116
Query: 248 RRFTIDIALWKFETSKYYVTIIDAPXHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 427
+ TI A Y V IID P H DF + D A+L++ + G I+
Sbjct: 117 KGITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSIT 176
Query: 428 KNGQTREH 451
+ Q R +
Sbjct: 177 VDRQMRRY 184
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 46.4 bits (105), Expect = 2e-05
Identities = 37/128 (28%), Positives = 57/128 (44%)
Frame = +2
Query: 68 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERX 247
NI + H+DSGK+T T +++ G I E E ++ G G+ +D + ER
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRIH----EIHEVRGRD-GVGA-----KMDSMDLERE 116
Query: 248 RRFTIDIALWKFETSKYYVTIIDAPXHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 427
+ TI A Y V IID P H DF + D A+L++ + G I+
Sbjct: 117 KGITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSIT 176
Query: 428 KNGQTREH 451
+ Q R +
Sbjct: 177 VDRQMRRY 184
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 41.5 bits (93), Expect = 5e-04
Identities = 31/117 (26%), Positives = 52/117 (44%)
Frame = +2
Query: 56 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 235
K + NI ++ H+D+GK+TTT ++Y G + E+ +G+ W ++
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTGR---------NYKIGEVHEGTATMDW----ME 140
Query: 236 AERXRRFTIDIALWKFETSKYYVTIIDAPXHRDFIKNMITGTSQADCAVLIVAAGTG 406
E+ R TI A K+ + IID P H DF + D A+ + + G
Sbjct: 141 QEQERGITITSAATTTFWDKHRINIIDTPGHVDFTLEVERALRVLDGAICLFDSVAG 197
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 39.9 bits (89), Expect = 0.001
Identities = 28/113 (24%), Positives = 52/113 (46%)
Frame = +2
Query: 68 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERX 247
N +I H+D GKST L+ G + R +++ + ++ + + KL+A R
Sbjct: 88 NFSIIAHIDHGKSTLADKLLQVTGTVQNRDMKEQFLDNMDLE----RERGITIKLQAARM 143
Query: 248 RRFTIDIALWKFETSKYYVTIIDAPXHRDFIKNMITGTSQADCAVLIVAAGTG 406
R + +E + + + +ID P H DF + + + A+L+V A G
Sbjct: 144 R--------YVYEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG 188
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 39.5 bits (88), Expect = 0.002
Identities = 41/132 (31%), Positives = 52/132 (39%), Gaps = 7/132 (5%)
Frame = +2
Query: 32 D*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKY 211
D K EK N +I H+D GKST L+ G I K G G +Y
Sbjct: 57 DLTKFPSEKIR-NFSIIAHIDHGKSTLADRLMELTGTIKK-------------GHGQPQY 102
Query: 212 AWVLDKLKAERXRRFTIDIALWKFET-------SKYYVTIIDAPXHRDFIKNMITGTSQA 370
LDKL+ ER A +E S Y + +ID P H DF + S
Sbjct: 103 ---LDKLQRERGITVKAQTATMFYENKVEDQEASGYLLNLIDTPGHVDFSYEVSRSLSAC 159
Query: 371 DCAVLIVAAGTG 406
A+L+V A G
Sbjct: 160 QGALLVVDAAQG 171
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 37.9 bits (84), Expect = 0.006
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 6/114 (5%)
Frame = +2
Query: 68 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRT---IEKFEKEAQEMGKG-SFKYAWV--LDK 229
N+ VI HVD GKST T L+ G I + + + A E +G + K + +
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYE 80
Query: 230 LKAERXRRFTIDIALWKFETSKYYVTIIDAPXHRDFIKNMITGTSQADCAVLIV 391
+ E + FT + ++Y + +ID+P H DF + D A+++V
Sbjct: 81 MTDESLKSFT-----GARDGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 31.5 bits (68), Expect = 0.51
Identities = 26/113 (23%), Positives = 47/113 (41%)
Frame = +2
Query: 68 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERX 247
N+ ++GH+ GK+ L+ + + F + ++ K + V ++ +
Sbjct: 140 NVALVGHLQHGKTVFMDMLVEQT-----HHMSTFNAKNEKHMK--YTDTRVDEQERNISI 192
Query: 248 RRFTIDIALWKFETSKYYVTIIDAPXHRDFIKNMITGTSQADCAVLIVAAGTG 406
+ + + L + Y I+D P H +F M AD AVLIV A G
Sbjct: 193 KAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 31.5 bits (68), Expect = 0.51
Identities = 26/113 (23%), Positives = 47/113 (41%)
Frame = +2
Query: 68 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERX 247
N+ ++GH+ GK+ L+ + + F + ++ K + V ++ +
Sbjct: 140 NVALVGHLQHGKTVFMDMLVEQT-----HHMSTFNAKNEKHMK--YTDTRVDEQERNISI 192
Query: 248 RRFTIDIALWKFETSKYYVTIIDAPXHRDFIKNMITGTSQADCAVLIVAAGTG 406
+ + + L + Y I+D P H +F M AD AVLIV A G
Sbjct: 193 KAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At5g13650.2 68418.m01585 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 676
Score = 30.3 bits (65), Expect = 1.2
Identities = 29/113 (25%), Positives = 45/113 (39%)
Frame = +2
Query: 68 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERX 247
NI ++ HVD GK+T ++ + K ++ Q M + ++D ER
Sbjct: 85 NIAIVAHVDHGKTTLVDSMLRQA---------KVFRDNQVMQER------IMDSNDLERE 129
Query: 248 RRFTIDIALWKFETSKYYVTIIDAPXHRDFIKNMITGTSQADCAVLIVAAGTG 406
R TI V IID P H DF + + D +L+V + G
Sbjct: 130 RGITILSKNTSITYKNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEG 182
>At5g13650.1 68418.m01584 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 675
Score = 30.3 bits (65), Expect = 1.2
Identities = 29/113 (25%), Positives = 45/113 (39%)
Frame = +2
Query: 68 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERX 247
NI ++ HVD GK+T ++ + K ++ Q M + ++D ER
Sbjct: 84 NIAIVAHVDHGKTTLVDSMLRQA---------KVFRDNQVMQER------IMDSNDLERE 128
Query: 248 RRFTIDIALWKFETSKYYVTIIDAPXHRDFIKNMITGTSQADCAVLIVAAGTG 406
R TI V IID P H DF + + D +L+V + G
Sbjct: 129 RGITILSKNTSITYKNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEG 181
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 302 VTIIDAPXHRDFIKNMITGTSQADCAVLIVAAGTG 406
+T +D P H F + G + D VL+VAA G
Sbjct: 270 ITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDG 304
>At5g44785.2 68418.m05490 expressed protein contains Pfam PF05329:
Protein of unknown function (DUF731)
Length = 442
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +1
Query: 505 NDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPIS 624
N +TE + P+ E K E+S++I IG+ V F P S
Sbjct: 61 NVATEKESTPPKKIEYKPEISNWINLIGFVEQPVQFGPCS 100
>At5g44785.1 68418.m05489 expressed protein contains Pfam PF05329:
Protein of unknown function (DUF731)
Length = 440
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +1
Query: 505 NDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPIS 624
N +TE + P+ E K E+S++I IG+ V F P S
Sbjct: 61 NVATEKESTPPKKIEYKPEISNWINLIGFVEQPVQFGPCS 100
>At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein
similar to 1,4-alpha-glucan branching enzyme [Solanum
tuberosum] GI:1621012, 1,4-alpha-glucan branching enzyme
(EC 2.4.1.18) from [Homo sapiens] SP|Q04446, {Solanum
tuberosum} SP|P30924; contains Pfam profiles: PF00128
Alpha amylase catalytic domain, PF02922 Isoamylase
N-terminal domain
Length = 777
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +1
Query: 529 SEPR---FEEIKKEVSSYIKKIGYNPAAVAFVP 618
SEP+ FEE K+V ++K+ GYN + VP
Sbjct: 257 SEPKVSTFEEFTKKVLPHVKRAGYNAIQLIGVP 289
>At5g51710.1 68418.m06413 K+ efflux antiporter, putative (KEA5)
Monovalent cation:proton antiporter family 2 (CPA2
family) member, PMID:11500563; related to
glutathione-regulated potassium-efflux system protein
[Escherichia coli] GP|606284|gb|AAA58147
Length = 568
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 535 PRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNM 645
PRF ++ ++SS ++ Y AAVAF +S W D +
Sbjct: 354 PRFLKLMIQLSSQTNEL-YQLAAVAFCLLSAWCSDKL 389
>At1g76530.1 68414.m08906 auxin efflux carrier family protein
contains auxin efflux carrier domain, Pfam:PF03547
Length = 415
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Frame = +1
Query: 457 ARFHPRCQTAHRRSKQNDSTEPPYSEPRFEEIKKEVSSYIKKIG----YNPAAVAFV 615
+ + C+ SK+ + E + R+EE+K+ V S KK+ + PA +A +
Sbjct: 201 SNYDDSCKVQLISSKEEEKEEDNHQVGRWEEVKQRVVSLSKKVNLGSIFAPATIAAI 257
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,332,290
Number of Sequences: 28952
Number of extensions: 292772
Number of successful extensions: 965
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 956
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1383534864
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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