Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0259
(767 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 36 0.005
SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyce... 35 0.011
SPBC577.07 |ubp10||ubiquitin C-terminal hydrolase Ubp10|Schizosa... 34 0.026
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 33 0.059
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 32 0.10
SPBC23G7.08c |rga7||GTPase activating protein Rga7|Schizosacchar... 31 0.14
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 31 0.18
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 30 0.42
SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pom... 29 0.73
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 29 0.97
SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 29 0.97
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 29 0.97
SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces pomb... 28 1.3
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 28 1.7
SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|... 27 2.2
SPBC800.09 |sum2||G2/M transition checkpoint protein Sum2|Schizo... 27 2.2
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 3.9
SPAC25B8.07c |||hypoxia induced family protein|Schizosaccharomyc... 27 3.9
SPBC9B6.03 |||zinc finger protein|Schizosaccharomyces pombe|chr ... 27 3.9
SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein Sap49|Schizo... 27 3.9
SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces... 26 5.2
SPAC17A5.10 |||conserved fungal protein|Schizosaccharomyces pomb... 26 6.8
SPCC1620.12c |||GTPase activating protein |Schizosaccharomyces p... 26 6.8
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 26 6.8
SPBC19C7.05 |||cell wall organization protein |Schizosaccharomyc... 25 9.0
SPCC1672.06c |asp1|vip1|inositol hexakisphosphate kinase/inosito... 25 9.0
SPBP35G2.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr... 25 9.0
SPCC794.11c |||ENTH domain protein Ent3|Schizosaccharomyces pomb... 25 9.0
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 36.3 bits (80), Expect = 0.005
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +3
Query: 207 PPQPSPYGYTAQAPSPPPTTGTACRTPPPASSGGTSLPTETGALPHTDTTPHDSRP 374
PP P+ T + SP P+T T+C T G S T +P T T+ + P
Sbjct: 316 PPPPASTSSTGTSSSPLPSTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTPP 371
Score = 33.5 bits (73), Expect = 0.034
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +3
Query: 216 PSPYGYTAQAPSPPPTTGTACRTPPPASSGGTSLPTETGALPHTDTT 356
P+ T P+ PPT+ ++ TPPP +S +S T + LP T T+
Sbjct: 293 PTGNSTTPVTPTVPPTSTSSTSTPPPPAS-TSSTGTSSSPLPSTSTS 338
Score = 33.1 bits (72), Expect = 0.045
Identities = 18/57 (31%), Positives = 24/57 (42%)
Frame = +3
Query: 204 VPPQPSPYGYTAQAPSPPPTTGTACRTPPPASSGGTSLPTETGALPHTDTTPHDSRP 374
+P P+ T SP PTT T+C T G S T +P T T+ + P
Sbjct: 261 IPIPPTSTSSTDTNSSPLPTTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTPP 317
Score = 32.3 bits (70), Expect = 0.078
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = +3
Query: 204 VPPQPSPYGYTAQAPSPPPTTGTACRTPPPASSGG-TSLPTE-TGALPHTDTT 356
+P P+ T SP PTT T+C T +GG +SL T T +P T T+
Sbjct: 205 IPIPPTSTSSTDTNSSPLPTTSTSCTTSTSIPTGGSSSLSTPITPTVPPTSTS 257
Score = 31.5 bits (68), Expect = 0.14
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = +3
Query: 204 VPPQPSPYGYTAQAPSPPPTTGTACRTPP--PASSGGTSLPTE-TGALPHTDTT 356
+P P+ T +P PTT T+C T P + G +SL T T +P T T+
Sbjct: 148 IPIPPTSTSSTDTNSNPLPTTSTSCTTSTSIPPTGGSSSLSTPITPTVPPTSTS 201
Score = 29.9 bits (64), Expect = 0.42
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = +3
Query: 234 TAQAPSPPPTTGTACRTPP--PASSGGTSLPTE-TGALPHTDTT 356
T + SP P+T T+C T P + G +SL T T +P T T+
Sbjct: 101 TGSSSSPLPSTSTSCTTSTSIPPTGGSSSLSTPITPTVPPTSTS 144
Score = 29.9 bits (64), Expect = 0.42
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 9/68 (13%)
Frame = +3
Query: 216 PSPYGYTAQAPSPPPTTGTACRTPPP---ASSGGTS----LPTETGALPHTDTTP--HDS 368
P+ T P+ PPT+ ++ TPPP SS GTS L T T T P + +
Sbjct: 347 PTGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLLSTSTSCTTSTSIPPTGNST 406
Query: 369 RP*HPECP 392
P P P
Sbjct: 407 TPVTPTVP 414
Score = 29.5 bits (63), Expect = 0.55
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +3
Query: 207 PPQPSPYGYTAQAPSPPPTTGTACRTPPPASSGGTSLPTETGALPHTDTT 356
PP P+ T + SP +T T+C T G S T +P T ++
Sbjct: 370 PPPPASTSSTGTSSSPLLSTSTSCTTSTSIPPTGNSTTPVTPTVPPTSSS 419
Score = 27.9 bits (59), Expect = 1.7
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 6/54 (11%)
Frame = +3
Query: 210 PQPSPYGYTAQAPSPPPTTGTAC-RTP-----PPASSGGTSLPTETGALPHTDT 353
P PS + S PPT G++ TP PP S+ TS+P + TDT
Sbjct: 107 PLPSTSTSCTTSTSIPPTGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDT 160
>SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1666
Score = 35.1 bits (77), Expect = 0.011
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +2
Query: 2 IELAWRHNIMDFAMPYLIQTVRELTTKVEKLEEADAKRXPRVRRDSE 142
+E++WR + D+A PY I E+ +KV LE+ D K V+ + E
Sbjct: 1578 MEISWRKGLQDYAYPYFINFQCEMFSKVLNLEK-DLKDRQAVKSEEE 1623
>SPBC577.07 |ubp10||ubiquitin C-terminal hydrolase
Ubp10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 502
Score = 33.9 bits (74), Expect = 0.026
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
Frame = +2
Query: 542 MFAVGTFAKQNYYIERNT-----HLADLALEPFLQNE-IYVNISIATRYKLIYXIIY 694
+F + F K NY+ ERN L D + PF+ + I N I+T+Y L+ II+
Sbjct: 391 IFHIKRFMKNNYFTERNQTIVTFPLDDFDMSPFIDDSFIQSNPKISTKYNLVANIIH 447
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 32.7 bits (71), Expect = 0.059
Identities = 24/81 (29%), Positives = 27/81 (33%), Gaps = 4/81 (4%)
Frame = +3
Query: 144 PTMIIEPQLMLTAGPSMPYVVPPQPS----PYGYTAQAPSPPPTTGTACRTPPPASSGGT 311
P PQ+ P P VPP PS P G AP PP +A P P
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAG-PPSAPPPPLPASSAPSVPNPGDRSAL 1752
Query: 312 SLPTETGALPHTDTTPHDSRP 374
TG T S+P
Sbjct: 1753 LQQIHTGTRLKKTVTTDKSKP 1773
Score = 29.5 bits (63), Expect = 0.55
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +3
Query: 171 MLTAGP-SMPYVVPPQPSPYGYTAQAPSPPPTTGTACRTPPPASSGGTSLP 320
M A P S P V P +P +A P PPP + + PP +G S P
Sbjct: 1681 MAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAP 1731
Score = 25.8 bits (54), Expect = 6.8
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = +3
Query: 195 PYVVPPQPSPYGYTAQAPSPPPTTGTACRTPPPASSGGTSLP 320
P VVPP P A AP P G P P+S+ P
Sbjct: 1444 PQVVPPAP----MHAVAPVQPKAPGMVTNAPAPSSAPAPPAP 1481
Score = 25.4 bits (53), Expect = 9.0
Identities = 21/74 (28%), Positives = 28/74 (37%), Gaps = 5/74 (6%)
Frame = +3
Query: 192 MPYVVPPQPSPYGYTAQAPSPP----PTTGTACRTPPPASSGGTSLPTETGALP-HTDTT 356
+P VP P P + A PP P T + T PP+ S +P+ P H
Sbjct: 1485 LPPAVPNVPVPSMIPSVAQQPPSSVAPATAPS-STLPPSQSSFAHVPSPAPPAPQHPSAA 1543
Query: 357 PHDSRP*HPECPYR 398
S P P+R
Sbjct: 1544 ALSSAPADNSMPHR 1557
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.9 bits (69), Expect = 0.10
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Frame = +3
Query: 192 MPYVVPPQPSPYGYTAQAPSPPPTTGTACRTPPPASSG---GTSLPTETGALPHTDTTP 359
+P V PP +P T A PP TA P PA S S P + PH++ +P
Sbjct: 1207 VPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTPRSSVPSPHSNASP 1265
Score = 30.7 bits (66), Expect = 0.24
Identities = 17/70 (24%), Positives = 27/70 (38%), Gaps = 1/70 (1%)
Frame = +3
Query: 135 IAXPTMIIEPQLMLTAGPSMPYVVPPQPSPYGYTAQAPSPPPTTGTACRTPP-PASSGGT 311
+ P+ P + + P +P P P + +PPP + P PA SG
Sbjct: 1024 VPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAP 1083
Query: 312 SLPTETGALP 341
+P +G P
Sbjct: 1084 PVPAPSGIPP 1093
Score = 29.9 bits (64), Expect = 0.42
Identities = 24/83 (28%), Positives = 33/83 (39%), Gaps = 5/83 (6%)
Frame = +3
Query: 108 PSEXRECGEIAXPTMIIEPQLMLTAGPSMPYVVPPQPSPYGYTAQAPSP----PPTTGTA 275
P G + P + P + + P+ P PP P+P G P P PP +
Sbjct: 1051 PVPKSSSGAPSAPPPVPAPSSEIPSIPA-PSGAPPVPAPSGIPP-VPKPSVAAPPVPKPS 1108
Query: 276 CRTPP-PASSGGTSLPTETGALP 341
PP PA SG +P + A P
Sbjct: 1109 VAVPPVPAPSGAPPVPKPSVAAP 1131
Score = 29.1 bits (62), Expect = 0.73
Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
Frame = +3
Query: 135 IAXPTMIIEPQLMLTAGPSMPYVVPPQPSPYGYTAQAPSP---PPTTGTACRTPP-PASS 302
+A P + +P + + P+ P PP P P P P PP + PP PA S
Sbjct: 1099 VAAPP-VPKPSVAVPPVPA-PSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPS 1156
Query: 303 GGTSLPTETGALP 341
G +P + A P
Sbjct: 1157 GAPPVPKPSVAAP 1169
Score = 27.9 bits (59), Expect = 1.7
Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +3
Query: 174 LTAGPSMPYV-VPPQPSPYGYTAQAPSPPPTTGTACRTPPPASSGGTSLPTETGALPHTD 350
++ P+ P VPP P +++AP P + A P P+++ +PT T +P +
Sbjct: 1000 VSTSPAAPLARVPPVPK---LSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSS 1056
Query: 351 TTPHDSRP 374
+ + P
Sbjct: 1057 SGAPSAPP 1064
Score = 27.1 bits (57), Expect = 3.0
Identities = 23/72 (31%), Positives = 29/72 (40%), Gaps = 3/72 (4%)
Frame = +3
Query: 135 IAXPTMIIEPQLMLTAGPSMPYVVPPQ---PSPYGYTAQAPSPPPTTGTACRTPPPASSG 305
+ P+ I P AG +P V PP P P P PPP+T TP S+G
Sbjct: 1171 VPAPSSGIPPVPKPAAG--VPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTP---SAG 1225
Query: 306 GTSLPTETGALP 341
+P T P
Sbjct: 1226 LPPVPVPTAKAP 1237
>SPBC23G7.08c |rga7||GTPase activating protein
Rga7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 31.5 bits (68), Expect = 0.14
Identities = 22/70 (31%), Positives = 26/70 (37%)
Frame = +3
Query: 138 AXPTMIIEPQLMLTAGPSMPYVVPPQPSPYGYTAQAPSPPPTTGTACRTPPPASSGGTSL 317
A T II+P G S PP TA PSP T A T P S +
Sbjct: 328 ASKTKIIQPPSSYGTGSSAGKTNPPVNPTIKVTAAIPSPLQNTNPAPSTFPNPSVASPAF 387
Query: 318 PTETGALPHT 347
P + + P T
Sbjct: 388 PNSSTSNPST 397
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 31.1 bits (67), Expect = 0.18
Identities = 27/118 (22%), Positives = 46/118 (38%)
Frame = +3
Query: 96 KKQTPSEXRECGEIAXPTMIIEPQLMLTAGPSMPYVVPPQPSPYGYTAQAPSPPPTTGTA 275
KKQ E R+ + ++I + + G + PQ +P P+P PT
Sbjct: 688 KKQAVKELRKL-QAKIDSIIADSMSPMGTGAVNSPAIKPQVTP-----APPTPAPTPAVK 741
Query: 276 CRTPPPASSGGTSLPTETGALPHTDTTPHDSRP*HPECPYRLHKNFSLDKKI*IMLLS 449
PPP S L H +++ + PE P + +++ D ++ LLS
Sbjct: 742 HHPPPPPVRSSISPSMPPAPLTHANSSTPMNYVSQPESPPQSYESIQNDNELLQELLS 799
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.9 bits (64), Expect = 0.42
Identities = 20/65 (30%), Positives = 25/65 (38%), Gaps = 3/65 (4%)
Frame = +3
Query: 186 PSMPYVVPPQPSP-YGYTAQAPSPPPTTGTACRTP--PPASSGGTSLPTETGALPHTDTT 356
PS+P PP+ P A P PPP+ GT P PP S+ +
Sbjct: 234 PSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLP 293
Query: 357 PHDSR 371
P SR
Sbjct: 294 PPSSR 298
Score = 28.7 bits (61), Expect = 0.97
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +3
Query: 210 PQPSPYGYTAQAPSPPPTTGTACRTPPPASS 302
P P P G +A P PP + + R PPP SS
Sbjct: 352 PLP-PQGRSAPPPPPPRSAPSTGRQPPPLSS 381
Score = 27.5 bits (58), Expect = 2.2
Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Frame = +3
Query: 207 PPQPSPYGYTAQAPSPPPTTGTACRTPPPASSGGTSLPTETG-ALPHTDTTPHDSRP*HP 383
PP P P + PPP + + + PPA ++P + ALP S P P
Sbjct: 361 PPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPP--PAIPGRSAPALPPLGNASRTSTPPVP 418
Query: 384 ECP 392
P
Sbjct: 419 TPP 421
Score = 27.5 bits (58), Expect = 2.2
Identities = 19/60 (31%), Positives = 23/60 (38%)
Frame = +3
Query: 162 PQLMLTAGPSMPYVVPPQPSPYGYTAQAPSPPPTTGTACRTPPPASSGGTSLPTETGALP 341
P L +A PS+P P P P +A P P A PPA+ P A P
Sbjct: 429 PSLPPSAPPSLPMGAPAAP-PLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 27.5 bits (58), Expect = 2.2
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +3
Query: 162 PQLMLTAGPSMPYVVPPQPSPYGYTAQAPSPPPTTGTACRTPPPASSGGTSLPTETGA-L 338
P L + A P+ P + P P A P+ PP A PPPA + + P + A L
Sbjct: 437 PSLPMGA-PAAPPLPPSAPIAPPLPAGMPAAPPLP-PAAPAPPPAPAPAPAAPVASIAEL 494
Query: 339 PHTD 350
P D
Sbjct: 495 PQQD 498
Score = 27.1 bits (57), Expect = 3.0
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +3
Query: 183 GPSMPYVVPPQPSPYGYTAQAPSPPPTTGTACRTPPPASSGGT 311
G S + PP P P A + PP +A PPP S+ T
Sbjct: 330 GSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPST 372
Score = 26.2 bits (55), Expect = 5.2
Identities = 18/69 (26%), Positives = 25/69 (36%), Gaps = 2/69 (2%)
Frame = +3
Query: 207 PPQPSPYGYTAQAP--SPPPTTGTACRTPPPASSGGTSLPTETGALPHTDTTPHDSRP*H 380
PP P P T +P SPP P S+ LP + + + RP
Sbjct: 254 PPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPP 313
Query: 381 PECPYRLHK 407
P P R ++
Sbjct: 314 PPPPSRRNR 322
Score = 26.2 bits (55), Expect = 5.2
Identities = 16/38 (42%), Positives = 17/38 (44%)
Frame = +3
Query: 207 PPQPSPYGYTAQAPSPPPTTGTACRTPPPASSGGTSLP 320
PP P P AP+ PP G A RT P SLP
Sbjct: 388 PPAPPPAIPGRSAPALPP-LGNASRTSTPPVPTPPSLP 424
Score = 25.8 bits (54), Expect = 6.8
Identities = 18/72 (25%), Positives = 24/72 (33%)
Frame = +3
Query: 177 TAGPSMPYVVPPQPSPYGYTAQAPSPPPTTGTACRTPPPASSGGTSLPTETGALPHTDTT 356
T+ P +P PP P + PS PP+ PP P +P
Sbjct: 412 TSTPPVP--TPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPL 469
Query: 357 PHDSRP*HPECP 392
P + P P P
Sbjct: 470 P-PAAPAPPPAP 480
>SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 204
Score = 29.1 bits (62), Expect = 0.73
Identities = 20/76 (26%), Positives = 30/76 (39%)
Frame = +3
Query: 168 LMLTAGPSMPYVVPPQPSPYGYTAQAPSPPPTTGTACRTPPPASSGGTSLPTETGALPHT 347
L + PS+ + PP P Y+ A P + P PA + S GA P
Sbjct: 45 LTIPPPPSVDHSAPPSGPPPSYSNSAAPATPAASASSAAPAPAPA--ASQNRAYGAAPQ- 101
Query: 348 DTTPHDSRP*HPECPY 395
P+ + +P+ PY
Sbjct: 102 ---PYPPQGGYPQQPY 114
Score = 28.7 bits (61), Expect = 0.97
Identities = 14/50 (28%), Positives = 22/50 (44%)
Frame = +3
Query: 186 PSMPYVVPPQPSPYGYTAQAPSPPPTTGTACRTPPPASSGGTSLPTETGA 335
P +PP PS ++A PPP+ + PA+S ++ P A
Sbjct: 41 PVRGLTIPPPPS-VDHSAPPSGPPPSYSNSAAPATPAASASSAAPAPAPA 89
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 28.7 bits (61), Expect = 0.97
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 249 SPPPTTGTACRTPPPASSGGTSLPTETGALPHTDTTPHDSRP 374
S PP T P ASS T P T + +T+T+P + P
Sbjct: 208 SNPPHTEEPVAAKPEASSTATKGPRPTTSASNTNTSPANGAP 249
>SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 262
Score = 28.7 bits (61), Expect = 0.97
Identities = 21/69 (30%), Positives = 28/69 (40%), Gaps = 2/69 (2%)
Frame = +3
Query: 159 EPQLMLTAGPSMPYVVPPQPSPYGYTAQAPSPPPTTGTACRTPPPA--SSGGTSLPTETG 332
EP L PS+P +PS Q P PP + PPP SS G+ T
Sbjct: 111 EPALPSRGTPSLPSRPGSRPSVLNQE-QVPPPPVRPNVMSQMPPPPSYSSSGSYSQTYQS 169
Query: 333 ALPHTDTTP 359
+T ++P
Sbjct: 170 NANYTASSP 178
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 28.7 bits (61), Expect = 0.97
Identities = 16/51 (31%), Positives = 20/51 (39%)
Frame = +3
Query: 168 LMLTAGPSMPYVVPPQPSPYGYTAQAPSPPPTTGTACRTPPPASSGGTSLP 320
L+ + P P V+ P P+P P P P G PPP G P
Sbjct: 728 LLKSPPPPPPAVIVPTPAPA--PIPVPPPAPIMGGPPPPPPPPGVAGAGPP 776
Score = 28.7 bits (61), Expect = 0.97
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = +3
Query: 162 PQLMLTAGPSMPYVVPPQPSPYGYTAQAPSPPPTTGTACRTPPP 293
P +++ P VPP P+P P PPP G A PPP
Sbjct: 737 PAVIVPTPAPAPIPVPP-PAPI--MGGPPPPPPPPGVAGAGPPP 777
Score = 28.7 bits (61), Expect = 0.97
Identities = 21/60 (35%), Positives = 23/60 (38%)
Frame = +3
Query: 135 IAXPTMIIEPQLMLTAGPSMPYVVPPQPSPYGYTAQAPSPPPTTGTACRTPPPASSGGTS 314
+ PT P + P M PP P P G P PPP PPPA S G S
Sbjct: 739 VIVPTPAPAPIPVPPPAPIMGGPPPPPPPP-GVAGAGPPPPP-------PPPPAVSAGGS 790
>SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 741
Score = 28.3 bits (60), Expect = 1.3
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +3
Query: 249 SPPPTTGTACRTPPPASSGGTSLPTETGALPHTDTTPHDSRP 374
+P T T P + G S+ E A +TTP DSRP
Sbjct: 251 NPDSNTSTPTTRSEPLAGEGASIDAEN-ASSRQETTPSDSRP 291
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 27.9 bits (59), Expect = 1.7
Identities = 22/87 (25%), Positives = 33/87 (37%), Gaps = 7/87 (8%)
Frame = +3
Query: 108 PSEXRECGEIAXPTMIIEPQLMLTAG--PSMPYVVPPQPSPYGYTAQAPSPPPT-----T 266
P+ + PT+ + L+ P +P V P Q P PPP +
Sbjct: 1024 PTASQRASAYEPPTVSVPSPSALSPSVTPQLPPVSSRLPPVSATRPQIPQPPPVSTALPS 1083
Query: 267 GTACRTPPPASSGGTSLPTETGALPHT 347
+A PP A+S G S + + P T
Sbjct: 1084 SSAVSRPPIATSAGRSSTAASTSAPLT 1110
Score = 25.4 bits (53), Expect = 9.0
Identities = 28/90 (31%), Positives = 33/90 (36%), Gaps = 16/90 (17%)
Frame = +3
Query: 171 MLTAGPSMPYVVPP-------QPSPYGYTAQA---PSPPPT-----TGTACRTPPPASSG 305
M A PSM V P QP+ T+ P PPPT + A +PPP G
Sbjct: 873 MRRAAPSMAPVRSPFPGASSAQPAAMSRTSSVSTLPPPPPTASMTASAPAIASPPPPKVG 932
Query: 306 GT-SLPTETGALPHTDTTPHDSRP*HPECP 392
T PT +G P P P P
Sbjct: 933 ETYHPPTASGTRVPPVQQPSHPNPYTPVAP 962
>SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 743
Score = 27.5 bits (58), Expect = 2.2
Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Frame = +3
Query: 177 TAGPSMPYVVPPQPSPYGYTAQAPSPPPTTGTAC--RTPPPASSGGTSLPTETGALPHTD 350
T S P V + P + AP+P PT T + A+S G +L GA H
Sbjct: 597 TPNASSPLDVRSKQKPSSANSNAPTPAPTVNTTNPESSTNEATSVGPALEPSQGANVHKS 656
Query: 351 TTPHDSR 371
+ D++
Sbjct: 657 DSELDNQ 663
>SPBC800.09 |sum2||G2/M transition checkpoint protein
Sum2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 27.5 bits (58), Expect = 2.2
Identities = 21/76 (27%), Positives = 28/76 (36%), Gaps = 6/76 (7%)
Frame = +3
Query: 207 PPQPSPYG--YTAQAPSPPP----TTGTACRTPPPASSGGTSLPTETGALPHTDTTPHDS 368
P QP+PYG Y P+ P A PP GT L T A+P+
Sbjct: 117 PVQPNPYGAPYQQAPPAGAPYYMYPNAPAQFVPPGGLPLGTPLDASTPAVPYYGAPDQQQ 176
Query: 369 RP*HPECPYRLHKNFS 416
PE + + F+
Sbjct: 177 MGQRPEFAQNVSQGFA 192
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 26.6 bits (56), Expect = 3.9
Identities = 18/77 (23%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Frame = +3
Query: 180 AGPSMPYVVPPQPSPYGYTAQAPSPPPTTGTACRTPPPASSGGTSLPTETGALPHT-DTT 356
+ PS+P VPP P + +P T + + P + ++ +E+ P+ +
Sbjct: 186 SAPSLPSAVPPMPPKVPPPPLSQAPVANTSSRPSSFAPPAGHAPNVTSESPKFPNRGPSI 245
Query: 357 PHDSRP*HPECPYRLHK 407
P S P P Y L +
Sbjct: 246 PSASVPPVPPSSYVLQQ 262
Score = 26.2 bits (55), Expect = 5.2
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +3
Query: 183 GPSMPYVVPPQPSPYGYTAQAPSPPPTTGTACRT-PPPASSGGTSLPTETGALPHTDTTP 359
G S PP +P T Q+ PPT+ + PPP+ + +P++ +P + P
Sbjct: 116 GKSSASAAPPS-APAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPP 174
Score = 25.8 bits (54), Expect = 6.8
Identities = 14/52 (26%), Positives = 21/52 (40%)
Frame = +3
Query: 186 PSMPYVVPPQPSPYGYTAQAPSPPPTTGTACRTPPPASSGGTSLPTETGALP 341
P P PP PS + PP ++PP A S +++P +P
Sbjct: 151 PPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVP 202
>SPAC25B8.07c |||hypoxia induced family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 113
Score = 26.6 bits (56), Expect = 3.9
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 542 MFAVGTFAKQNYYIERNTHL 601
+ VGTF YYI R HL
Sbjct: 46 LMTVGTFLASGYYIRRENHL 65
>SPBC9B6.03 |||zinc finger protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 293
Score = 26.6 bits (56), Expect = 3.9
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +3
Query: 165 QLMLTAGPSMPYVVPPQPSPYGYTAQAPSPPPTTGTACRTPPPASSGGTSLPTETGALP- 341
+L + +G S PY +PS Y +AP+ T GT + P SS S P G+LP
Sbjct: 15 RLNIYSGAS-PYTQRVRPS-YELI-EAPTRQATNGTGSVSGSPNSS-SNSTPANQGSLPS 70
Query: 342 HTDTTPHDS 368
HT+ + S
Sbjct: 71 HTNPQLYSS 79
>SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein
Sap49|Schizosaccharomyces pombe|chr 1|||Manual
Length = 335
Score = 26.6 bits (56), Expect = 3.9
Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
Frame = +3
Query: 138 AXPTMIIEPQLMLTAG---PSMPYVVPPQPSPYGYTAQAPSPPPTTGTACRTPPPASS 302
A P + I L TA P MP +P P G PPP G +P PA++
Sbjct: 250 AVPPLSIPNVLPFTAAQHFPGMP-AMPMMNVPMGPGGAPLVPPPPPGMVMASPSPAAA 306
>SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 637
Score = 26.2 bits (55), Expect = 5.2
Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Frame = +3
Query: 189 SMPYVVPPQPSPYGYTAQAPSPPPTTGTACR--TPPPASSGGTSLPTETGALPHTDTTP 359
SM P S YG A PS P + G+ + T PP + +T + +++P
Sbjct: 118 SMDMPFDPLASDYGNAANFPSVPSSLGSNHQFITTPPVNGSNEPTSAQTNHIITANSSP 176
>SPAC17A5.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 224
Score = 25.8 bits (54), Expect = 6.8
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +3
Query: 177 TAGPSMPYVVPPQPSPYGYTAQAPSP--PPTTGTACRTPPPASSGGTSLP 320
++G Y P P P T+Q P+ P T +PPP+S+ T+ P
Sbjct: 60 SSGSGNAYSQAPYP-PARPTSQRPNSWQPGNASTMYASPPPSSNYNTAKP 108
>SPCC1620.12c |||GTPase activating protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 595
Score = 25.8 bits (54), Expect = 6.8
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3
Query: 120 RECGEIAXPTMIIEPQLMLTAGPSMPYVVPPQPSPYGYTAQAPSPPPTT 266
++C + + P I+ L + P Y +PP PS A + SPPP T
Sbjct: 113 QQCEKESIPVSNID-WLQWASVPLFAYDLPPDPS--NPNATSSSPPPLT 158
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 25.8 bits (54), Expect = 6.8
Identities = 12/34 (35%), Positives = 14/34 (41%)
Frame = +3
Query: 195 PYVVPPQPSPYGYTAQAPSPPPTTGTACRTPPPA 296
P V PQP+ T +P A PPPA
Sbjct: 367 PPPVMPQPAAAAVTTPVAAPVAAAAAAVPVPPPA 400
>SPBC19C7.05 |||cell wall organization protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 150
Score = 25.4 bits (53), Expect = 9.0
Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Frame = +3
Query: 210 PQPSPYGYTAQAPSPPPTTGTACRTP-PPASSGGTSLPTETGALPHTDTTPHDSRP*HPE 386
P +P YTA+ P + P PP S PTE +P +T+ P +PE
Sbjct: 75 PLTAPPPYTAE---PEARYNSTIHNPMPPMSQAYRPPPTEPPTVPAYETSSEFPPPAYPE 131
>SPCC1672.06c |asp1|vip1|inositol hexakisphosphate kinase/inositol
pyrophosphate synthase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 920
Score = 25.4 bits (53), Expect = 9.0
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +3
Query: 285 PPPASSGGTSLPTETGALPHTDTTP 359
PPP S L + G L H D TP
Sbjct: 378 PPPRESEAWRLKSLVGVLRHADRTP 402
>SPBP35G2.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1060
Score = 25.4 bits (53), Expect = 9.0
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +3
Query: 183 GPSMPYVVPPQPSPYGYTAQAPSPPPTTGTACRTPPPASSGGTSLPTETGA 335
GP++ Y PP +GY PPTT +A +SS LPT A
Sbjct: 264 GPTLGYNTPP----FGY-------PPTTSSALPNASGSSSSFFGLPTAVSA 303
>SPCC794.11c |||ENTH domain protein Ent3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 476
Score = 25.4 bits (53), Expect = 9.0
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -2
Query: 268 PVVGGGEGACAVYPYGDGWGGTTYG 194
P G G+ YGDG G T YG
Sbjct: 188 PSFGSSRGSYRTRVYGDGGGFTDYG 212
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,838,261
Number of Sequences: 5004
Number of extensions: 57302
Number of successful extensions: 338
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 296
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 369323696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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