Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0257
         (746 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78542-5|CAB01748.1|  915|Caenorhabditis elegans Hypothetical pr...    29   3.5  
AL132904-17|CAC35850.1|  240|Caenorhabditis elegans Hypothetical...    29   4.6  

>Z78542-5|CAB01748.1|  915|Caenorhabditis elegans Hypothetical
           protein F20D1.6 protein.
          Length = 915

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 13/25 (52%), Positives = 20/25 (80%)
 Frame = -3

Query: 570 YMFKQKVGASLSAAHSDVINRMTTR 496
           Y+FK+ +GAS+SA H +V  RM++R
Sbjct: 215 YLFKEHLGASISAFHEEV--RMSSR 237


>AL132904-17|CAC35850.1|  240|Caenorhabditis elegans Hypothetical
           protein Y111B2A.21 protein.
          Length = 240

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 18/40 (45%), Positives = 21/40 (52%)
 Frame = -1

Query: 647 GVRDQELAQRPSPTRPTSTRWAADWTTCSNRRWAHR*ARR 528
           G R + +  +PSP RPT  R A  WTT   RR A    RR
Sbjct: 65  GPRSEPVDVKPSPKRPTK-RSAETWTTA--RRQARNGLRR 101


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,959,696
Number of Sequences: 27780
Number of extensions: 252034
Number of successful extensions: 577
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 577
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)