Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0256
(654 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 257 5e-69
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 140 9e-34
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 134 6e-32
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 133 1e-31
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 125 4e-29
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 111 5e-25
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 105 3e-23
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 103 1e-22
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 102 3e-22
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 98 6e-21
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 4e-20
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 94 1e-19
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 94 1e-19
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 87 1e-17
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 86 2e-17
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 80 2e-15
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 76 2e-14
SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 71 6e-13
SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 71 6e-13
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 70 2e-12
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 68 8e-12
SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 1e-11
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 64 9e-11
SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6) 62 5e-10
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 58 5e-09
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 56 3e-08
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 54 1e-07
SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 50 2e-06
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069) 49 3e-06
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 5e-06
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 42 4e-04
SB_53656| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.022
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 35 0.067
SB_43466| Best HMM Match : DEAD (HMM E-Value=1.8) 34 0.12
SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.35
SB_51385| Best HMM Match : DEAD (HMM E-Value=0.00031) 32 0.47
SB_34740| Best HMM Match : DEAD (HMM E-Value=0.00031) 32 0.47
SB_55048| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27) 30 1.4
SB_50927| Best HMM Match : DEAD (HMM E-Value=3.2e-06) 29 2.5
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_33247| Best HMM Match : Ammonium_transp (HMM E-Value=0) 29 4.4
SB_55399| Best HMM Match : C1_4 (HMM E-Value=4.8) 29 4.4
SB_24613| Best HMM Match : Ctr (HMM E-Value=0.73) 28 7.6
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 257 bits (630), Expect = 5e-69
Identities = 121/170 (71%), Positives = 139/170 (81%)
Frame = +2
Query: 11 YILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPK 190
+ILP IVHI +QP L DGPIVLVL PTRELAQQ+Q+VA G+ +R+TCI+GGAPK
Sbjct: 113 FILPGIVHINHQPLLQPGDGPIVLVLCPTRELAQQVQEVAYSVGKHCKLRSTCIYGGAPK 172
Query: 191 GPQGRCLERGVEIVIATPGRTLDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIE 370
GPQ R LERGVEI IATPGR +D LE TNLRRCTYLVLDEADRMLDMGFEPQIR II+
Sbjct: 173 GPQIRELERGVEICIATPGRLIDMLESRKTNLRRCTYLVLDEADRMLDMGFEPQIRTIID 232
Query: 371 QIRPDRQVLMWSATWPREVQNLAEEFLHDYIQINIGSLELSANHNISRLL 520
QIRPDRQ LMWSATWP+EVQ LA +FL DY+ I +GSL L+ANH I +++
Sbjct: 233 QIRPDRQTLMWSATWPKEVQGLAHDFLSDYVHITVGSLGLTANHKILQIV 282
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +1
Query: 508 LQIVDVXEEWEKNDKXXXXXXXXXXXXXXXXXXFAETKRRVDDICK 645
LQIVDV E+ EK F ETKRR D++ +
Sbjct: 279 LQIVDVCEDHEKEHNVGSFIGGIVILSSLQTLIFTETKRRADELTR 324
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 140 bits (339), Expect = 9e-34
Identities = 72/159 (45%), Positives = 101/159 (63%)
Frame = +2
Query: 8 AYILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAP 187
A++ PA+VHI++QP L DGPIVL+ APTREL QQI A FG++ ++ +FGG
Sbjct: 570 AFLWPALVHIMDQPELQVGDGPIVLICAPTRELCQQIYTEARRFGKAYNIHVVAVFGGGN 629
Query: 188 KGPQGRCLERGVEIVIATPGRTLDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKII 367
K Q + L+ G EIV+ATPGR +D ++ + TNL R TYLV DEADRM DMGF
Sbjct: 630 KYEQSKALQEGAEIVVATPGRLIDHVKAKATNLHRVTYLVFDEADRMFDMGF-------- 681
Query: 368 EQIRPDRQVLMWSATWPREVQNLAEEFLHDYIQINIGSL 484
L++SAT+ ++V++L + L D +++ IG L
Sbjct: 682 --------ALLFSATFKKKVEHLCRDILVDPVRVVIGEL 712
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 134 bits (324), Expect = 6e-32
Identities = 74/168 (44%), Positives = 102/168 (60%), Gaps = 11/168 (6%)
Frame = +2
Query: 8 AYILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAP 187
+Y P + P ++ I +V+ PTRELA QI + +F + ++R C++GG
Sbjct: 124 SYEKPTPIQAQAIPVIMSGRDMIAIVMTPTRELAIQIHRECKKFCKPNNLRCVCVYGGTG 183
Query: 188 KGPQGRCLERGVEIVIATPGRTLDFL---EKETTNLRRCTYLVLDEADRMLDMGFEPQIR 358
Q L+RG EI++ TPGR +D L TN +RCTYLVLDEADRM DMGFEPQI
Sbjct: 184 ISEQIAELKRGAEIIVCTPGRMIDMLTANNGRVTNCQRCTYLVLDEADRMFDMGFEPQIT 243
Query: 359 K--------IIEQIRPDRQVLMWSATWPREVQNLAEEFLHDYIQINIG 478
K II+ IRPDRQ +M+SAT+PR+++ LA + L I+I +G
Sbjct: 244 KIRYPKVMRIIDCIRPDRQTVMFSATFPRQMEALARKILDKPIEIQVG 291
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 133 bits (322), Expect = 1e-31
Identities = 68/165 (41%), Positives = 100/165 (60%), Gaps = 8/165 (4%)
Frame = +2
Query: 8 AYILPAIVHIIN----QPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIF 175
A++LP + ++N P + +APTRELA QI A +F +R +
Sbjct: 764 AFLLPVMTSMMNAGLTSSSFSETQTPQAMCIAPTRELANQIYLEARKFAHGTMLRPVVCY 823
Query: 176 GGAPKGPQGRCLERGVEIVIATPGRTLDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQI 355
GG Q R L+ G +++ TPGR DF+EK +L+ +L+LDEADRMLDMGFEP I
Sbjct: 824 GGVSVSHQLRQLQSGCNLLVGTPGRLTDFIEKGKVSLKGLQFLILDEADRMLDMGFEPAI 883
Query: 356 RKIIEQI----RPDRQVLMWSATWPREVQNLAEEFLHDYIQINIG 478
R+I+E + + +RQ LM+SAT+P E+Q LA +FL+DY+ + +G
Sbjct: 884 RRIVESMGMPDKSERQTLMFSATFPEEIQRLAGDFLNDYLFLTVG 928
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 125 bits (301), Expect = 4e-29
Identities = 68/162 (41%), Positives = 95/162 (58%), Gaps = 5/162 (3%)
Frame = +2
Query: 8 AYILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAP 187
AY+LP + +I Q P+ L +APTRELA+QI A +F ++ +GG
Sbjct: 532 AYMLPVLTSLIKQGLNAPPRSPLALCVAPTRELAKQIYIEARKFSDHTPIKVCVCYGGVS 591
Query: 188 KGPQGRCLERGVEIVIATPGRTLDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKII 367
Q LERG ++ TPGR DF+ +E L +L+LDEADRMLD+GF P I K+I
Sbjct: 592 VPYQASQLERGCHFLVGTPGRLQDFVSREKIYLGSIQHLILDEADRMLDLGFGPDIHKLI 651
Query: 368 EQ----IRPDRQVLMWSATWPREVQNLAEEFLH-DYIQINIG 478
E+ + RQ LM+SAT+P E+Q+LA FL DY+ + +G
Sbjct: 652 EESNMTAKESRQTLMFSATFPDEIQHLAGSFLKPDYLFLAVG 693
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 111 bits (267), Expect = 5e-25
Identities = 58/127 (45%), Positives = 87/127 (68%), Gaps = 4/127 (3%)
Frame = +2
Query: 158 RNTCIFGGAPKGPQGRCLERGVEIVIATPGRTLDFLEKETTNLRRCTYLVLDEADRMLDM 337
R ++GGA G Q R L+R +++ATPGR +D +++ L +LVLDEADRMLDM
Sbjct: 955 RPCVVYGGADIGSQLRELDRNCHLLVATPGRLVDMMDRGRVGLDSIRFLVLDEADRMLDM 1014
Query: 338 GFEPQIRKIIEQ-IRPD---RQVLMWSATWPREVQNLAEEFLHDYIQINIGSLELSANHN 505
GFEPQIR+I++Q P RQ LM+SAT+P+E+Q LA +FL +YI + +G + S + N
Sbjct: 1015 GFEPQIRRIVDQDSMPKTGIRQTLMFSATFPKEIQMLARDFLENYIFLAVGKVG-STSEN 1073
Query: 506 ISRLLMF 526
I++ +++
Sbjct: 1074 ITQKVVW 1080
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 105 bits (252), Expect = 3e-23
Identities = 55/138 (39%), Positives = 77/138 (55%)
Frame = +2
Query: 80 LVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGRTLD 259
LVLAPTRELAQQIQ+V G +HV+ GG LE GV +V+ TPGR D
Sbjct: 163 LVLAPTRELAQQIQKVVLALGDYMHVKCHACIGGTNVREDRMKLEEGVHVVVGTPGRVFD 222
Query: 260 FLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPREVQNLA 439
+ + N R VLDEAD ML GF+ QI + ++ QV++ SAT P +V +
Sbjct: 223 MINRGVLNTRDIKLFVLDEADEMLSRGFKDQIYDVFTRLPTSVQVVLLSATMPTDVLEVT 282
Query: 440 EEFLHDYIQINIGSLELS 493
+F+ D ++I + E++
Sbjct: 283 NKFMRDVVRILVKREEVT 300
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 103 bits (248), Expect = 1e-22
Identities = 61/157 (38%), Positives = 96/157 (61%), Gaps = 8/157 (5%)
Frame = +2
Query: 5 LAYILPAIVHIINQPRLLRDDG--PIVLVLAPTRELAQQIQQVANEFGQ-SIHVRNTCIF 175
L++ LP +V + +L + G P VLV+APTRELA+Q V NEF ++ CI+
Sbjct: 125 LSFALP-LVEKLQDGKLSQKRGRAPKVLVMAPTRELAKQ---VGNEFENLKSNLEVYCIY 180
Query: 176 GGAPKGPQGRCLERGVEIVIATPGRTLDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQI 355
GG P PQ + G+++++ TPGR LDF+ + T +L + ++VLDE DRMLDMGF +
Sbjct: 181 GGMPYEPQENAINSGLDVLVGTPGRILDFMRQGTLDLSKLKHVVLDEVDRMLDMGFAESV 240
Query: 356 RKII----EQIRPDR-QVLMWSATWPREVQNLAEEFL 451
+++ + R D+ Q L++SAT P N A++++
Sbjct: 241 EEVLAASYAEDREDKPQTLLFSATLPPWAVNTAKKYM 277
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 102 bits (244), Expect = 3e-22
Identities = 57/141 (40%), Positives = 77/141 (54%)
Frame = +2
Query: 71 PIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGR 250
P LVL+PTRELA QIQ+V G + V+ GG G R L+ G IV TPGR
Sbjct: 66 PQALVLSPTRELANQIQKVVLALGDYMSVQCHACIGGTNIGEDIRKLDYGQHIVSGTPGR 125
Query: 251 TLDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPREVQ 430
D + + R LVLDEAD ML+ GF+ QI + + P QV++ SAT P E+
Sbjct: 126 VFDMIRRRNLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLLSATLPHEIL 185
Query: 431 NLAEEFLHDYIQINIGSLELS 493
+ +F+ D I+I + EL+
Sbjct: 186 EMTSKFMTDPIRILVKRDELT 206
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 97.9 bits (233), Expect = 6e-21
Identities = 69/183 (37%), Positives = 99/183 (54%), Gaps = 9/183 (4%)
Frame = +2
Query: 5 LAYILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGA 184
LA+++P I+ + + + DG LV++PTRELA Q +V + G + I GG
Sbjct: 102 LAFLIP-IIETLWRQKWTSMDGLGALVISPTRELAYQTFEVLVKIGNKHDLSAGLIIGGK 160
Query: 185 P-KGPQGRCLERGVEIVIATPGRTLDFLEKETTNLRRCT---YLVLDEADRMLDMGFEPQ 352
K Q R ++ IV+ TPGR L ++ ET N CT LVLDEADR+LDMGF P
Sbjct: 161 DLKNEQKRIMK--TNIVVCTPGRLLQHMD-ETPNFD-CTSLQILVLDEADRILDMGFAPT 216
Query: 353 IRKIIEQIRPDRQVLMWSATWPREVQNLAEEFLHDYIQINIGS-----LELSANHNISRL 517
+ IIE + +RQ L++SAT R V++LA L Y+ + NH S++
Sbjct: 217 LNAIIENLPSERQTLLYSATQTRSVKDLARLSLQSYVVCELPDKLNFLFSFIRNHLKSKI 276
Query: 518 LMF 526
L+F
Sbjct: 277 LVF 279
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 95.1 bits (226), Expect = 4e-20
Identities = 52/147 (35%), Positives = 92/147 (62%), Gaps = 1/147 (0%)
Frame = +2
Query: 5 LAYILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGA 184
LA+++P +V ++ + + +G V++++PTREL+ Q VA + + + I GG
Sbjct: 624 LAFLVP-VVELLYKLQFKTRNGTGVIIISPTRELSLQTYGVARDLLKHHNFTYGIIMGGV 682
Query: 185 PKGPQGRCLERGVEIVIATPGRTLDFLEKETTNL-RRCTYLVLDEADRMLDMGFEPQIRK 361
+ + L++GV ++IATPGR LD L+ L + LV+DEADR+L++GFE ++R+
Sbjct: 683 NRKAEAERLQKGVNLLIATPGRLLDHLQNTQGFLYKNLQCLVIDEADRILEIGFEEEMRQ 742
Query: 362 IIEQIRPDRQVLMWSATWPREVQNLAE 442
II + RQ +++SAT + V++LA+
Sbjct: 743 IIRILPSKRQTVLFSATQTKNVEDLAK 769
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 93.9 bits (223), Expect = 1e-19
Identities = 54/163 (33%), Positives = 93/163 (57%), Gaps = 7/163 (4%)
Frame = +2
Query: 80 LVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAP-KGPQGRCLERG------VEIVIA 238
LVL PTRELA Q Q+ E G+ + + GG K R + V +++A
Sbjct: 119 LVLVPTRELALQTSQICIELGKHMGAQVMVTTGGTSLKDDILRLYNKDIFVHVVVHVIVA 178
Query: 239 TPGRTLDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWP 418
TPGR LD ++K+ ++ +C LV+DEAD++L M F+ + +II+ + +RQ+L++SAT+P
Sbjct: 179 TPGRVLDLMKKKLADMSKCQMLVMDEADKLLSMDFKKMLEQIIKHLPENRQILLFSATFP 238
Query: 419 REVQNLAEEFLHDYIQINIGSLELSANHNISRLLMFXRNGRRM 547
V++ E+ L +IN+ EL+ H +++ F +++
Sbjct: 239 ISVRDFKEKHLRKPYEINLMD-ELTL-HGVTQYYAFVEEKQKV 279
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 93.9 bits (223), Expect = 1e-19
Identities = 54/163 (33%), Positives = 93/163 (57%), Gaps = 7/163 (4%)
Frame = +2
Query: 80 LVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAP-KGPQGRCLERG------VEIVIA 238
LVL PTRELA Q Q+ E G+ + + GG K R + V +++A
Sbjct: 119 LVLVPTRELALQTSQICIELGKHMGAQVMVTTGGTSLKDDILRLYNKDIFVHVVVHVIVA 178
Query: 239 TPGRTLDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWP 418
TPGR LD ++K+ ++ +C LV+DEAD++L M F+ + +II+ + +RQ+L++SAT+P
Sbjct: 179 TPGRVLDLMKKKLADMSKCQMLVMDEADKLLSMDFKKMLEQIIKHLPENRQILLFSATFP 238
Query: 419 REVQNLAEEFLHDYIQINIGSLELSANHNISRLLMFXRNGRRM 547
V++ E+ L +IN+ EL+ H +++ F +++
Sbjct: 239 ISVRDFKEKHLRKPYEINLMD-ELTL-HGVTQYYAFVEEKQKV 279
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 87.0 bits (206), Expect = 1e-17
Identities = 64/183 (34%), Positives = 87/183 (47%), Gaps = 25/183 (13%)
Frame = +2
Query: 5 LAYILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEF-------------GQ 145
LAY LP + + + D P+ L+L PTREL QQ+ +E Q
Sbjct: 124 LAYSLPLCMLLRTKAPSNPGDTPVALILTPTRELMQQVFMNVSEMLDVIRCPGNPGPSNQ 183
Query: 146 SI---------HVRNTCIFGGAPKGPQGRCLERGVEIVIATPGRTLDFLEKETTNLRRCT 298
S+ + + GG P Q L G ++V+ATPGR LD L + T
Sbjct: 184 SVIYDTQQFTARYKAVAVCGGVPVSTQTIALREGADVVVATPGRLLD--------LYKIT 235
Query: 299 YLVLDEADRMLDMGFEPQIRKII---EQIRPDRQVLMWSATWPREVQNLAEEFLHDYIQI 469
YLV+DE DRML MG E Q+RKI+ RQ L+WSAT P ++ LA + + I I
Sbjct: 236 YLVMDEPDRMLGMGMEEQLRKIVGLATGTSRARQTLLWSATLPESLERLARSAVLNPITI 295
Query: 470 NIG 478
+G
Sbjct: 296 QVG 298
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 86.2 bits (204), Expect = 2e-17
Identities = 51/136 (37%), Positives = 73/136 (53%), Gaps = 1/136 (0%)
Frame = +2
Query: 8 AYILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAP 187
A+ LP + + + P G +VL PTRELA QI G+ I ++ I GG
Sbjct: 60 AFALPILQKLCDDPY-----GIFAVVLTPTRELAFQIADQFKVLGRPIGLKEAVIVGGLD 114
Query: 188 KGPQGRCLERGVEIVIATPGRTLDFLEK-ETTNLRRCTYLVLDEADRMLDMGFEPQIRKI 364
Q L +VIATPGR D ++ +T NL++ +LVLDEADR+LD F ++ I
Sbjct: 115 MMKQALSLANKPHVVIATPGRLADHIKSTDTLNLKKIQFLVLDEADRLLDPSFGDDLKVI 174
Query: 365 IEQIRPDRQVLMWSAT 412
+ + RQ L++SAT
Sbjct: 175 FDAVPEKRQTLLFSAT 190
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 79.8 bits (188), Expect = 2e-15
Identities = 47/116 (40%), Positives = 65/116 (56%), Gaps = 1/116 (0%)
Frame = +2
Query: 8 AYILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAP 187
A+ LP + +++ P+ L L+L PTRELA QI + G I V+ I GG
Sbjct: 17 AFALPILQALLDNPQRL-----FALILTPTRELAFQISEQCEALGSGIGVKCAVIVGGID 71
Query: 188 KGPQGRCLERGVEIVIATPGRTLDFLEK-ETTNLRRCTYLVLDEADRMLDMGFEPQ 352
Q L + I+IATPGR +D LE + +LR YLV+DEADR+L+M FE +
Sbjct: 72 MMSQALMLAKKPHIIIATPGRLIDHLENTKGFSLRTLKYLVMDEADRILNMDFEKE 127
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 76.2 bits (179), Expect = 2e-14
Identities = 33/93 (35%), Positives = 60/93 (64%)
Frame = +2
Query: 212 ERGVEIVIATPGRTLDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQ 391
E GV++++ATPGR ++ + ++ +L V+DE D ML +GFE Q+++I+E++ RQ
Sbjct: 253 EMGVQVIVATPGRMVEIISRQAVDLTHVIGCVVDEVDTMLQLGFEQQVQQILERLSNRRQ 312
Query: 392 VLMWSATWPREVQNLAEEFLHDYIQINIGSLEL 490
+++SAT P ++ +A L+ + I+ GS L
Sbjct: 313 TMLFSATIPPSIEAMASRLLNAPVFISAGSPSL 345
>SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 445
Score = 71.3 bits (167), Expect = 6e-13
Identities = 34/82 (41%), Positives = 54/82 (65%)
Frame = +2
Query: 281 NLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPREVQNLAEEFLHDY 460
N+ YLVLDEADRM+DMGFE +R I + RQ L++SAT P+++QN A+ L
Sbjct: 13 NVSPYRYLVLDEADRMIDMGFEEDVRTIFSYFKSQRQTLLFSATMPKKIQNFAKSALVKP 72
Query: 461 IQINIGSLELSANHNISRLLMF 526
+ +N+G +A+ ++ ++L+F
Sbjct: 73 VTVNVGRAG-AASLDVIQVLIF 93
>SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 212
Score = 71.3 bits (167), Expect = 6e-13
Identities = 34/82 (41%), Positives = 54/82 (65%)
Frame = +2
Query: 281 NLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPREVQNLAEEFLHDY 460
N+ YLVLDEADRM+DMGFE +R I + RQ L++SAT P+++QN A+ L
Sbjct: 13 NVSPYRYLVLDEADRMIDMGFEEDVRTIFSYFKSQRQTLLFSATMPKKIQNFAKSALVKP 72
Query: 461 IQINIGSLELSANHNISRLLMF 526
+ +N+G +A+ ++ ++L+F
Sbjct: 73 VTVNVGRAG-AASLDVIQVLIF 93
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 69.7 bits (163), Expect = 2e-12
Identities = 54/160 (33%), Positives = 87/160 (54%), Gaps = 5/160 (3%)
Frame = +2
Query: 71 PIVLVLAPTRELAQQIQQVANEFGQSI-HVR-NTCIFGGA-PKGPQGRCLERGVEIVIAT 241
P V+ L+PT ELA+Q +VA G+ H++ N + G P+G +C + I+I T
Sbjct: 174 PQVICLSPTYELARQTGKVAEAMGKHCPHIKINYAVRGNQFPRGQ--KCTDH---IIIGT 228
Query: 242 PGRTLDFLEKETT-NLRRCTYLVLDEADRMLDM-GFEPQIRKIIEQIRPDRQVLMWSATW 415
PG LD++ K R+ + VLDEAD M+ + G + Q +I + + D QVL++SAT+
Sbjct: 229 PGTLLDWIRKSKCFEPRKVSVFVLDEADIMIALQGHQDQSIRIHKSLHKDCQVLLFSATY 288
Query: 416 PREVQNLAEEFLHDYIQINIGSLELSANHNISRLLMFXRN 535
+V AE + + I I + E S + NI + + +N
Sbjct: 289 DEDVMKFAETVVPNPIIIRLRREEESLD-NIKQYYVVCKN 327
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 67.7 bits (158), Expect = 8e-12
Identities = 35/134 (26%), Positives = 70/134 (52%), Gaps = 2/134 (1%)
Frame = +2
Query: 77 VLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGRTL 256
+++L PTRE+A Q++ V G +F G + + + I + TPGR
Sbjct: 84 IIILTPTREIAVQVKDVICAIGCHYDGLACKVFIGGISLEEDKKALKSCHIAVGTPGRVK 143
Query: 257 DFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPREVQNL 436
+E++ +LDEAD++LD F+ QI I + ++Q++ +SAT+P + N
Sbjct: 144 YLIEQKYLKTESVRMFILDEADKLLDESFQQQINWIFSALPENKQMMAFSATYPEVLANH 203
Query: 437 AEEFLHD--YIQIN 472
++++ + ++++N
Sbjct: 204 LKKYMTEPTFVRLN 217
>SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 66.9 bits (156), Expect = 1e-11
Identities = 27/53 (50%), Positives = 42/53 (79%)
Frame = +2
Query: 335 MGFEPQIRKIIEQIRPDRQVLMWSATWPREVQNLAEEFLHDYIQINIGSLELS 493
MGFEP+I+KI+ IRPDRQ +M SATWP VQ +A++++ D +++ +G L+L+
Sbjct: 1 MGFEPEIKKILLDIRPDRQTVMTSATWPPGVQRMADQYMTDPVRVFVGCLDLN 53
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 64.1 bits (149), Expect = 9e-11
Identities = 41/129 (31%), Positives = 63/129 (48%), Gaps = 5/129 (3%)
Frame = +2
Query: 5 LAYILPAIVHIINQPR-----LLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTC 169
LAY+ P +VH + + L R P ++ P RELA QI + A R+
Sbjct: 430 LAYLAP-LVHRLREDEERHGILARLKRPRACIVVPARELATQILKTAKSLCHHARFRSVG 488
Query: 170 IFGGAPKGPQGRCLERGVEIVIATPGRTLDFLEKETTNLRRCTYLVLDEADRMLDMGFEP 349
+ GG + LE V++++ATPG L + +K+ T+LV+DEAD M D F+
Sbjct: 489 LIGGRKQKWMRDDLESPVDLLVATPGTLLKYRQKDRLFFSDLTHLVIDEADTMFDASFKS 548
Query: 350 QIRKIIEQI 376
+I+ I
Sbjct: 549 LTMEILHTI 557
>SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6)
Length = 127
Score = 61.7 bits (143), Expect = 5e-10
Identities = 28/58 (48%), Positives = 44/58 (75%)
Frame = +2
Query: 302 LVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPREVQNLAEEFLHDYIQINI 475
LVLDEADRMLDMGF IR+++ ++ RQ L++SAT+ +++ LAE+ LH+ ++I +
Sbjct: 7 LVLDEADRMLDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEV 64
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 58.4 bits (135), Expect = 5e-09
Identities = 46/152 (30%), Positives = 79/152 (51%), Gaps = 4/152 (2%)
Frame = +2
Query: 8 AYILPAIVHIINQPRLLRDD----GPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIF 175
A+ +P +V I+ P++ RD+ GP L+LAPTRELAQQI++ +FG+ + +R +
Sbjct: 154 AFAIPLLVWIMGLPKIERDNDADQGPYALILAPTRELAQQIEEEILKFGRPLGIRTVSVI 213
Query: 176 GGAPKGPQGRCLERGVEIVIATPGRTLDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQI 355
GGA R ++ G E + + L+ L +N++ + D + MG +
Sbjct: 214 GGA-----DRMIDMGFEPEVQ---KILEHL--PVSNVKPDSEDSEDPEHLLTHMGKDKY- 262
Query: 356 RKIIEQIRPDRQVLMWSATWPREVQNLAEEFL 451
RQ +M++AT P +V+ LA+ +L
Sbjct: 263 ----------RQTVMFTATMPPQVERLAKNYL 284
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 56.0 bits (129), Expect = 3e-08
Identities = 43/156 (27%), Positives = 76/156 (48%), Gaps = 7/156 (4%)
Frame = +2
Query: 80 LVLAPTRELAQQIQQVANEFGQSIHVR-NTCIFGGAPKGPQGRCLERGVEIVIATPGRTL 256
+V++PTRELAQQI + + R + A G + +I++ TP R +
Sbjct: 209 VVVSPTRELAQQIYREFCHLAKGCAFRIHVLTKANASTNTFGAKSSKRFDILVTTPNRLV 268
Query: 257 DFLEKET--TNLRRCTYLVLDEADRMLDM---GFEPQIRKIIEQI-RPDRQVLMWSATWP 418
L +E L +L+LDEAD++ + GF QI I + +PD ++SAT
Sbjct: 269 HLLTQEPPGIELHNVEWLILDEADKLFEEGKDGFREQIATIYQACNKPDIHRGLFSATLS 328
Query: 419 REVQNLAEEFLHDYIQINIGSLELSANHNISRLLMF 526
++ A L +++++ +G + SA + + L+F
Sbjct: 329 NGIEEWAGLHLDNHVRVTVG-IRNSATATVDQELLF 363
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 54.0 bits (124), Expect = 1e-07
Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Frame = +2
Query: 65 DGPI-VLVLAPTRELAQQIQQVANEFGQSI-HVRNTCIFGGAPKGPQGRCLERGV-EIVI 235
DG + VLV+ TRELA QI + F + + +++ FGG + L+ IV+
Sbjct: 113 DGQVSVLVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFGGINIKKDQQTLKTNCPHIVV 172
Query: 236 ATPGRTLDFLEKETTNLRRCTYLVLDEADRMLD 334
TPGR L ++T NL+ + +LDE D+ML+
Sbjct: 173 GTPGRILALTREKTLNLKHAKHFILDECDKMLE 205
>SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 54.0 bits (124), Expect = 1e-07
Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Frame = +2
Query: 65 DGPI-VLVLAPTRELAQQIQQVANEFGQSI-HVRNTCIFGGAPKGPQGRCLERGV-EIVI 235
DG + VLV+ TRELA QI + F + + +++ FGG + L+ IV+
Sbjct: 113 DGQVSVLVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFGGINIKKDQQTLKTNCPHIVV 172
Query: 236 ATPGRTLDFLEKETTNLRRCTYLVLDEADRMLD 334
TPGR L ++T NL+ + +LDE D+ML+
Sbjct: 173 GTPGRILALTREKTLNLKHAKHFILDECDKMLE 205
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 50.0 bits (114), Expect = 2e-06
Identities = 38/123 (30%), Positives = 66/123 (53%), Gaps = 5/123 (4%)
Frame = +2
Query: 5 LAYILPAIVHIINQPRLLRD----DGPIVLVLAPTRELAQQIQQVANEFGQSIH-VRNTC 169
LAY+LP I+H I + + ++ +GP+VL+L + ++ V + ++ R
Sbjct: 239 LAYLLP-IIHQITESSVYQELPLANGPLVLILCTNWQNTARVYGVCEDLIRNRRRTRVQM 297
Query: 170 IFGGAPKGPQGRCLERGVEIVIATPGRTLDFLEKETTNLRRCTYLVLDEADRMLDMGFEP 349
IFGG + + L G E+++ATP L L++ T+L R ++V D+AD ML F
Sbjct: 298 IFGGGAEEDRIVPLINGCEVLVATPPCFLRMLKRCYTSLDRLCHVVFDDAD-MLAEYFTA 356
Query: 350 QIR 358
+I+
Sbjct: 357 EIK 359
>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
Length = 120
Score = 49.2 bits (112), Expect = 3e-06
Identities = 28/60 (46%), Positives = 33/60 (55%)
Frame = +2
Query: 71 PIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGR 250
P LVL+PTRELA QIQ+V G + V+ GG G R L+ G IV TPGR
Sbjct: 4 PQALVLSPTRELANQIQKVVLALGDYMSVQCHACIGGTNIGEDIRKLDYGQHIVSGTPGR 63
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 48.4 bits (110), Expect = 5e-06
Identities = 26/76 (34%), Positives = 42/76 (55%)
Frame = +2
Query: 74 IVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGRT 253
+ L++APTRELA Q++ + + V+ I GG Q R L++ EIV+ATPGR
Sbjct: 220 LALIMAPTRELALQVKDHLVKAAKYTSVKVAAIVGGMAAPKQQRLLKQRPEIVVATPGRL 279
Query: 254 LDFLEKETTNLRRCTY 301
+ + + T+ + Y
Sbjct: 280 WELISQVFTHGKPLLY 295
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +2
Query: 221 VEIVIATPGRTLDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQI 376
V +V+ ++ EK +N++ YLV+DEADRM++ G ++ I+E I
Sbjct: 316 VVVVVVVVDTSVTNQEKHVSNIQLLRYLVIDEADRMVEQGHYEELSSILELI 367
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 46.8 bits (106), Expect = 2e-05
Identities = 30/82 (36%), Positives = 43/82 (52%)
Frame = +2
Query: 80 LVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGRTLD 259
L+L+PTRELA Q Q+ E G+ ++++ I GG + V+ATPGR L
Sbjct: 355 LILSPTRELALQTQKFIKELGRFTGLKSSVILGG--------------DSVVATPGRFLH 400
Query: 260 FLEKETTNLRRCTYLVLDEADR 325
+ + L Y+V DEADR
Sbjct: 401 VVMEMELKLSSVEYVVFDEADR 422
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 41.9 bits (94), Expect = 4e-04
Identities = 20/52 (38%), Positives = 30/52 (57%)
Frame = +2
Query: 221 VEIVIATPGRTLDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQI 376
V+IV TPG+ DF+ + +L + + +LDEAD +L G I KI +I
Sbjct: 136 VDIVTGTPGKLNDFITTDKISLHQVKFFILDEADGLLAQGNNDLIMKIYNKI 187
>SB_53656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 51
Score = 36.3 bits (80), Expect = 0.022
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = +2
Query: 266 EKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQI 376
E+ +N++ YLV+DEADRM++ G ++ I+E I
Sbjct: 2 EEHVSNVQLLRYLVIDEADRMVEQGHYEELSSILELI 38
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 34.7 bits (76), Expect = 0.067
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Frame = +2
Query: 80 LVLAPTRELAQQ-IQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVE---IVIATPG 247
+++ PTRELA Q + +V+ G V + G Q + L+ + IVI TP
Sbjct: 229 IIVVPTRELASQMLYEVSRLLGDKSIVAS--FVSGVDLSRQEKLLKDSLHPPRIVIGTPK 286
Query: 248 RTLDFLEKETTNLRRCTYLVLDEADRML 331
R + +++ +R +V+DE D+ L
Sbjct: 287 RLWEIVQEHEHLFQRTKRIVIDEVDKTL 314
>SB_43466| Best HMM Match : DEAD (HMM E-Value=1.8)
Length = 210
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/50 (40%), Positives = 27/50 (54%)
Frame = +2
Query: 242 PGRTLDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQ 391
P +D ++K T R LVLDEAD ML+ GF+ QI + + P Q
Sbjct: 21 PPLEVDGIDKLDT--RSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQ 68
>SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 45
Score = 32.3 bits (70), Expect = 0.35
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +2
Query: 149 IHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGRTLDFLEK 271
+HV+ GG LE GV +V+ TPGR D + +
Sbjct: 1 MHVKCHACIGGTNVREDRMKLEEGVHVVVGTPGRVFDMINR 41
>SB_51385| Best HMM Match : DEAD (HMM E-Value=0.00031)
Length = 127
Score = 31.9 bits (69), Expect = 0.47
Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Frame = +2
Query: 11 YILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQ-QIQQVANEFGQSIHVRNTCIFGGAP 187
++LPA++H R + + P+V++++P L + QI ++ +E + T G
Sbjct: 34 HLLPALLHKQRLLRNVSGNPPVVIIISPLSSLIRDQISRLPSERATQLRRSETSEVGDEF 93
Query: 188 KGPQGRCLER-GVEIVIATPGRTLDFLEKETTN 283
+ + LE G E + PG + F + TN
Sbjct: 94 RDCEKSKLENGGYEFLFCPPGGSDFFAIRTKTN 126
>SB_34740| Best HMM Match : DEAD (HMM E-Value=0.00031)
Length = 233
Score = 31.9 bits (69), Expect = 0.47
Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Frame = +2
Query: 11 YILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQ-QIQQVANEFGQSIHVRNTCIFGGAP 187
++LPA++H R + + P+V++++P L + QI ++ +E + T G
Sbjct: 140 HLLPALLHKQRLLRNVSGNPPVVIIISPLSSLIRDQISRLPSERATQLRRSETSEVGDEF 199
Query: 188 KGPQGRCLER-GVEIVIATPGRTLDFLEKETTN 283
+ + LE G E + PG + F + TN
Sbjct: 200 RDCEKSKLENGGYEFLFCPPGGSDFFAIRTKTN 232
>SB_55048| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 27
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 209 LERGVEIVIATPGRTLDFL 265
L+RG EI++ TPGR +D L
Sbjct: 4 LKRGAEIIVCTPGRMIDML 22
>SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27)
Length = 331
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +2
Query: 335 MGFEPQIRKIIEQIRPDRQVLMWSATWPREVQNLAEEFLHDYIQINIGSLELSANHNISR 514
MGFE I I+ + R+ ++SAT EV+ L L + +++ + +L+ N+ R
Sbjct: 1 MGFEASINTILGYLPKQRRTGLFSATQTDEVEALVRAGLRNPVRVTVRE-KLTKTKNVQR 59
>SB_50927| Best HMM Match : DEAD (HMM E-Value=3.2e-06)
Length = 368
Score = 29.5 bits (63), Expect = 2.5
Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = +2
Query: 227 IVIATPGRTLDFLEKETTNLRRCTYLVLDEA-DRMLDMGFEPQIRKIIEQIRPDRQVLMW 403
++ T G L + E ++T L +++V+DE +R + F + + + RPD +V++
Sbjct: 72 LLYCTTGILLRYFESDST-LAGVSHVVVDEVHERTEESDFLMMVLRDLIMERPDLRVILM 130
Query: 404 SATWPREVQNLAEEFLHDYIQINI 475
SAT L E+ +D I+I
Sbjct: 131 SATLD---SKLFSEYFYDAPVIHI 151
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 29.1 bits (62), Expect = 3.3
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +1
Query: 67 WSNSPCVGSNKRVSPTNTAGCQ*IWS 144
+ +PC G N +VSP N C WS
Sbjct: 767 YGGAPCPGRNIQVSPCNPTDCPSYWS 792
>SB_33247| Best HMM Match : Ammonium_transp (HMM E-Value=0)
Length = 486
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -2
Query: 506 CCGWPRAQENQC*SGCSHAGTLQLDSVLLGAM 411
CCG R ENQ S CS G +Q S + GA+
Sbjct: 316 CCGLVRRGENQLTSNCSQ-GRIQAFSSVYGAL 346
>SB_55399| Best HMM Match : C1_4 (HMM E-Value=4.8)
Length = 335
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/74 (22%), Positives = 33/74 (44%)
Frame = -3
Query: 400 HQYLSIRSNLFNNLPDLRLEAHVQHSISLIQHQISASAQVRCLLLQKIKSSTRSSNNNFH 221
H YL + +F +++LE H L + A + +LL+++ +R + FH
Sbjct: 158 HGYLGLFEYIFWKRKNMQLEDHSSLQGLLDSVEEGAGSMHNSMLLKELVFFSRKAMAYFH 217
Query: 220 SPLKTSALWSLWST 179
+ +W L+ T
Sbjct: 218 GLVDCEGIWDLFLT 231
>SB_24613| Best HMM Match : Ctr (HMM E-Value=0.73)
Length = 895
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +2
Query: 308 LDEADRMLDMGFEPQIRKIIEQIR 379
LDEAD+M+D F R+++E I+
Sbjct: 388 LDEADKMIDAYFREMQRRLMEDIK 411
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,134,159
Number of Sequences: 59808
Number of extensions: 402032
Number of successful extensions: 1096
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 948
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1075
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1669334250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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