Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0255
         (267 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q22LQ6 Cluster: Cation channel family protein; n=1; Tet...    31   5.0  
UniRef50_Q17DR6 Cluster: Regulator of presynaptic morphology pro...    31   5.0  
UniRef50_P38878 Cluster: Uncharacterized membrane protein YHR192...    31   5.0  
UniRef50_Q235A3 Cluster: Putative uncharacterized protein; n=1; ...    30   8.8  
UniRef50_Q22N11 Cluster: Cation channel family protein; n=1; Tet...    30   8.8  

>UniRef50_Q22LQ6 Cluster: Cation channel family protein; n=1;
           Tetrahymena thermophila SB210|Rep: Cation channel family
           protein - Tetrahymena thermophila SB210
          Length = 1324

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 14/43 (32%), Positives = 29/43 (67%)
 Frame = +3

Query: 24  REQNSKFQYINLKKKDISYKMY*NI*IKKTSMLG*KQFYQLKN 152
           +++ + F +I +K K+ +YKM  NI  K+ ++L  ++FY L++
Sbjct: 279 KQKRNNFIHIIMKMKNYAYKMASNIESKRLALLQRQKFYYLRD 321


>UniRef50_Q17DR6 Cluster: Regulator of presynaptic morphology protein;
            n=1; Aedes aegypti|Rep: Regulator of presynaptic
            morphology protein - Aedes aegypti (Yellowfever mosquito)
          Length = 2310

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +2

Query: 14   VGCTGTKFKISIYQFKKKGHIV*NVLKHLNKKD 112
            V C G KFK S +QF  + H+  N+ K L+K +
Sbjct: 1265 VQCFGLKFKQSDHQFLHRSHVFGNISKILSKSE 1297


>UniRef50_P38878 Cluster: Uncharacterized membrane protein YHR192W;
           n=2; Saccharomyces cerevisiae|Rep: Uncharacterized
           membrane protein YHR192W - Saccharomyces cerevisiae
           (Baker's yeast)
          Length = 278

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 15/36 (41%), Positives = 22/36 (61%)
 Frame = +2

Query: 38  KISIYQFKKKGHIV*NVLKHLNKKDIDAWIEAILSV 145
           K  + +FKK+ H+     K L K+D DAW + I+SV
Sbjct: 172 KTELEKFKKESHV-----KGLKKEDSDAWFDKIISV 202


>UniRef50_Q235A3 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 104

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = +2

Query: 86  VLKHLNKKDIDAWIEAILSVKK*FWLIFLSSIIR 187
           + K  +KK++  +IE +L+V   FW+IFL S  R
Sbjct: 5   ISKKNSKKNLTRFIEDLLNVFDKFWIIFLKSSFR 38


>UniRef50_Q22N11 Cluster: Cation channel family protein; n=1;
            Tetrahymena thermophila SB210|Rep: Cation channel family
            protein - Tetrahymena thermophila SB210
          Length = 1879

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
 Frame = +3

Query: 33   NSKFQYINLKKKDI--SYKMY*NI*IKKTSMLG*KQFYQLKNNF 158
            ++KF+ I+LK+K+I  SYK + N+   K S +    +Y + NN+
Sbjct: 1794 SNKFESISLKQKNIESSYKNFANVQNVKDSNINIINYYNITNNY 1837


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,880,946
Number of Sequences: 1657284
Number of extensions: 2890170
Number of successful extensions: 5471
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5383
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5467
length of database: 575,637,011
effective HSP length: 66
effective length of database: 466,256,267
effective search space used: 10257637874
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)