Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0255
         (267 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF262977-1|AAF76150.1| 5233|Drosophila melanogaster highwire pro...    28   2.1  
AE014298-2087|AAF48411.3| 5233|Drosophila melanogaster CG32592-P...    28   2.1  

>AF262977-1|AAF76150.1| 5233|Drosophila melanogaster highwire protein.
          Length = 5233

 Score = 27.9 bits (59), Expect = 2.1
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +2

Query: 14   VGCTGTKFKISIYQFKKKGHIV*NVLKHLNKKD 112
            + C G +F+ + +QF    H+  N+ K L+K D
Sbjct: 4143 IQCFGIRFRQADHQFLHSSHVFGNISKILSKSD 4175


>AE014298-2087|AAF48411.3| 5233|Drosophila melanogaster CG32592-PA
            protein.
          Length = 5233

 Score = 27.9 bits (59), Expect = 2.1
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +2

Query: 14   VGCTGTKFKISIYQFKKKGHIV*NVLKHLNKKD 112
            + C G +F+ + +QF    H+  N+ K L+K D
Sbjct: 4143 IQCFGIRFRQADHQFLHSSHVFGNISKILSKSD 4175


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,074,723
Number of Sequences: 53049
Number of extensions: 117158
Number of successful extensions: 130
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 130
length of database: 24,988,368
effective HSP length: 67
effective length of database: 21,434,085
effective search space used: 450115785
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)