Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0255
         (267 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z98851-1|CAB11539.2|  327|Caenorhabditis elegans Hypothetical pr...    25   5.6  
AF040645-13|AAB94983.1|  148|Caenorhabditis elegans Hypothetical...    25   7.4  
Z66500-4|CAA91305.2|  630|Caenorhabditis elegans Hypothetical pr...    25   9.7  
U39745-7|AAA80449.1|  612|Caenorhabditis elegans Uncoordinated p...    25   9.7  
M80241-1|AAA28157.1|  612|Caenorhabditis elegans unc-6 protein.        25   9.7  
AL132902-7|CAB81993.1|  485|Caenorhabditis elegans Hypothetical ...    25   9.7  
AL117203-10|CAB60424.2|  855|Caenorhabditis elegans Hypothetical...    25   9.7  

>Z98851-1|CAB11539.2|  327|Caenorhabditis elegans Hypothetical
           protein H12I19.1 protein.
          Length = 327

 Score = 25.4 bits (53), Expect = 5.6
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -1

Query: 153 YFLTDKIASIQASMSFLFKCFNTFYTI 73
           YFL     ++Q   +F+ + FN+FY I
Sbjct: 136 YFLKSTERTLQIIQTFIHRHFNSFYAI 162


>AF040645-13|AAB94983.1|  148|Caenorhabditis elegans Hypothetical
           protein F52C6.13 protein.
          Length = 148

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = -1

Query: 96  CFNTFYTIC-PFFLN*YIEILNFVPVHPTRAS 4
           C++T    C PFF++ + EI+ F P+   + S
Sbjct: 36  CYSTINFSCFPFFISRFSEIVFFFPLSDLKVS 67


>Z66500-4|CAA91305.2|  630|Caenorhabditis elegans Hypothetical
           protein T05C12.4 protein.
          Length = 630

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 14/52 (26%), Positives = 22/52 (42%)
 Frame = -1

Query: 189 SRMMDDKKINQNYFLTDKIASIQASMSFLFKCFNTFYTICPFFLN*YIEILN 34
           +R     KI +   +   I  + +    +F CF  FYT C   L   I++ N
Sbjct: 469 NRSSVSNKIGKVVSVNAAILLLMSPCMLVFSCFTLFYTHCHELLCATIQLQN 520


>U39745-7|AAA80449.1|  612|Caenorhabditis elegans Uncoordinated
           protein 6 protein.
          Length = 612

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 61  FKLIY*NFEFCSRAPDA 11
           F+L Y +  FCSR PD+
Sbjct: 139 FELTYVSMHFCSRLPDS 155


>M80241-1|AAA28157.1|  612|Caenorhabditis elegans unc-6 protein.
          Length = 612

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 61  FKLIY*NFEFCSRAPDA 11
           F+L Y +  FCSR PD+
Sbjct: 139 FELTYVSMHFCSRLPDS 155


>AL132902-7|CAB81993.1|  485|Caenorhabditis elegans Hypothetical
           protein Y71A12B.8 protein.
          Length = 485

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +2

Query: 32  KFKISIYQFKKKGHIV*NVLKHLNKKDIDAWIEAILSVK 148
           K K+ IY+F        NVLK + K+D++    AI +V+
Sbjct: 140 KIKVPIYRFFDDNP---NVLKEVYKQDVNEVFRAIQTVR 175


>AL117203-10|CAB60424.2|  855|Caenorhabditis elegans Hypothetical
           protein Y48C3A.14 protein.
          Length = 855

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = +2

Query: 5   DARVGCTGTKFKISIYQFKKKGHIV*NVLKH 97
           D R+GC+ T+F+   +Q  K G +  NV+ +
Sbjct: 186 DLRIGCSFTRFQTKFFQ-GKYGDLDSNVISY 215


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,526,962
Number of Sequences: 27780
Number of extensions: 71272
Number of successful extensions: 155
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 155
length of database: 12,740,198
effective HSP length: 67
effective length of database: 10,878,938
effective search space used: 228457698
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)