Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0255
         (267 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    20   6.1  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    19   8.0  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    19   8.0  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    19   8.0  

>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 19.8 bits (39), Expect = 6.1
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 133 NFIS*KIILVNFFI 174
           NF S   IL+N+FI
Sbjct: 10  NFPSTSFILINYFI 23


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 19.4 bits (38), Expect = 8.0
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 116 RCLFYLNVSIHFIR 75
           R  + LN S+HF+R
Sbjct: 27  RDTYALNQSLHFVR 40


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 19.4 bits (38), Expect = 8.0
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = -1

Query: 174 DKKINQNYFLTDKIASIQASMSFLFK 97
           +   N NYF +    S  ++   LFK
Sbjct: 135 ENNYNDNYFYSKSNGSNSSNSDVLFK 160


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 19.4 bits (38), Expect = 8.0
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 116 RCLFYLNVSIHFIR 75
           R  + LN S+HF+R
Sbjct: 117 RDTYALNQSLHFVR 130


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,676
Number of Sequences: 438
Number of extensions: 921
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  5012760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)