Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0254
(430 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 164 2e-41
03_01_0547 + 4093196-4093657,4094267-4095148 164 2e-41
03_01_0544 + 4082528-4082989,4083585-4084466 164 2e-41
03_01_0543 + 4076981-4077442,4078145-4079026 164 2e-41
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 100 6e-22
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 100 6e-22
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 69 2e-12
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 52 1e-07
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 38 0.005
02_04_0462 + 23131433-23132836 37 0.006
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 35 0.024
03_05_0511 + 25056018-25059107 32 0.23
01_06_0734 + 31569017-31569358,31569832-31569906,31570009-315701... 31 0.30
04_01_0103 + 1082077-1082167,1083037-1085477 31 0.39
02_04_0017 + 18937774-18937864,18938505-18940945 31 0.39
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 31 0.52
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 30 0.69
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314... 30 0.91
01_06_0662 + 30987187-30987277,30987825-30990214 30 0.91
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 29 1.2
02_04_0148 - 20198407-20201424 29 2.1
06_01_0325 - 2366193-2366367,2367063-2367122,2367323-2367463,236... 28 3.7
04_03_0106 + 11325172-11325379,11326590-11326640,11326987-113270... 28 3.7
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 164 bits (399), Expect = 2e-41
Identities = 85/128 (66%), Positives = 90/128 (70%)
Frame = +3
Query: 45 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAXXMGKGSFKYAWVL 224
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA M K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 225 DKLKAXREXGSXSXLLSGSSXLAXTMXPSLMLLXTEHFIXNMITGTSQADCAVLIVAAGT 404
DKLKA RE G + + FI NMITGTSQADCAVLI+ + T
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 405 GEFXAGIS 428
G F AGIS
Sbjct: 121 GGFEAGIS 128
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 164 bits (399), Expect = 2e-41
Identities = 85/128 (66%), Positives = 90/128 (70%)
Frame = +3
Query: 45 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAXXMGKGSFKYAWVL 224
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA M K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 225 DKLKAXREXGSXSXLLSGSSXLAXTMXPSLMLLXTEHFIXNMITGTSQADCAVLIVAAGT 404
DKLKA RE G + + FI NMITGTSQADCAVLI+ + T
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 405 GEFXAGIS 428
G F AGIS
Sbjct: 121 GGFEAGIS 128
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 164 bits (399), Expect = 2e-41
Identities = 85/128 (66%), Positives = 90/128 (70%)
Frame = +3
Query: 45 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAXXMGKGSFKYAWVL 224
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA M K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 225 DKLKAXREXGSXSXLLSGSSXLAXTMXPSLMLLXTEHFIXNMITGTSQADCAVLIVAAGT 404
DKLKA RE G + + FI NMITGTSQADCAVLI+ + T
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 405 GEFXAGIS 428
G F AGIS
Sbjct: 121 GGFEAGIS 128
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 164 bits (399), Expect = 2e-41
Identities = 85/128 (66%), Positives = 90/128 (70%)
Frame = +3
Query: 45 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAXXMGKGSFKYAWVL 224
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA M K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 225 DKLKAXREXGSXSXLLSGSSXLAXTMXPSLMLLXTEHFIXNMITGTSQADCAVLIVAAGT 404
DKLKA RE G + + FI NMITGTSQADCAVLI+ + T
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 405 GEFXAGIS 428
G F AGIS
Sbjct: 121 GGFEAGIS 128
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 100 bits (239), Expect = 6e-22
Identities = 52/125 (41%), Positives = 77/125 (61%), Gaps = 3/125 (2%)
Frame = +3
Query: 60 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAXXMGKGSFKYAWVLDKLKA 239
+ +N+ ++GHVDSGKST +G L++ G I K+ + K EKEA GKGSF YAW +D+
Sbjct: 246 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSE 305
Query: 240 XREXGSXSXLLSGSSXLAXTMXPSLMLLXT---EHFIXNMITGTSQADCAVLIVAAGTGE 410
RE G ++ + T ++LL + + F+ NMI+G +QAD A+L+V A TG
Sbjct: 306 ERERG---VTMTVAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQADAAILVVDACTGS 362
Query: 411 FXAGI 425
F AG+
Sbjct: 363 FEAGM 367
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 100 bits (239), Expect = 6e-22
Identities = 52/125 (41%), Positives = 77/125 (61%), Gaps = 3/125 (2%)
Frame = +3
Query: 60 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAXXMGKGSFKYAWVLDKLKA 239
+ +N+ ++GHVDSGKST +G L++ G I K+ + K EKEA GKGSF YAW +D+
Sbjct: 246 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSE 305
Query: 240 XREXGSXSXLLSGSSXLAXTMXPSLMLLXT---EHFIXNMITGTSQADCAVLIVAAGTGE 410
RE G ++ + T ++LL + + F+ NMI+G +QAD A+L+V A TG
Sbjct: 306 ERERG---VTMTVAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQADAAILVVDACTGS 362
Query: 411 FXAGI 425
F AG+
Sbjct: 363 FEAGM 367
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 68.5 bits (160), Expect = 2e-12
Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 4/114 (3%)
Frame = +3
Query: 93 DSGKSTTTGHLIYKCGGIDKRTIEKFEKEAXXMGKGSFKYAWVLDKLKAXREXGSXSXLL 272
D+GKST G +++ G +D RTI+K+EKEA + S+ A+++D + R G +
Sbjct: 4 DAGKSTAGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERLKGKTVEVG 63
Query: 273 SGSSXLAXT----MXPSLMLLXTEHFIXNMITGTSQADCAVLIVAAGTGEFXAG 422
T + + + + ++ NMI+G SQAD VL+++A GEF G
Sbjct: 64 RAHFETETTRFTILDAPVKMKGHKSYVPNMISGASQADIGVLVISARKGEFETG 117
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 52.4 bits (120), Expect = 1e-07
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Frame = +3
Query: 189 MGKGSFKYAWVLDKLKAXREXGSXSXLLSGSSXLAXTMXPSLMLLXTEH--FIXNMITGT 362
+GKGSF YAW +D+ RE G + G + ++L H F+ NMI+G
Sbjct: 276 IGKGSFAYAWAMDESADERERGITMTV--GVAYFDTKNYHVVLLDSPGHKDFVPNMISGA 333
Query: 363 SQADCAVLIVAAGTGEFXAGI 425
+Q+D A+L++ A G F AG+
Sbjct: 334 TQSDAAILVIDASIGSFEAGM 354
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 37.5 bits (83), Expect = 0.005
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +3
Query: 336 FIXNMITGTSQADCAVLIVAAGTGEFXAG 422
++ NMI+G SQAD VL+++A GEF G
Sbjct: 44 YVPNMISGASQADIGVLVISARKGEFETG 72
>02_04_0462 + 23131433-23132836
Length = 467
Score = 37.1 bits (82), Expect = 0.006
Identities = 30/122 (24%), Positives = 47/122 (38%)
Frame = +3
Query: 42 KMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAXXMGKGSFKYAWV 221
K + K H+NI IGHVD GK+T T L + +K+++
Sbjct: 63 KFERTKPHVNIGTIGHVDHGKTTLTAALTMVLASVGGSAPKKYDE--------------- 107
Query: 222 LDKLKAXREXGSXSXLLSGSSXLAXTMXPSLMLLXTEHFIXNMITGTSQADCAVLIVAAG 401
+D R G + + ++ NMITG +Q D A+L+V+
Sbjct: 108 IDAAPEERARGITINTATVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGA 167
Query: 402 TG 407
G
Sbjct: 168 DG 169
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 35.1 bits (77), Expect = 0.024
Identities = 33/119 (27%), Positives = 46/119 (38%)
Frame = +3
Query: 51 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAXXMGKGSFKYAWVLDK 230
+ K H+N+ IGHVD GK+T T I K EA GK +DK
Sbjct: 63 RTKPHVNVGTIGHVDHGKTTLTA------------AITKVLAEA---GKAKAVAFDEIDK 107
Query: 231 LKAXREXGSXSXLLSGSSXLAXTMXPSLMLLXTEHFIXNMITGTSQADCAVLIVAAGTG 407
+ G A + ++ NMITG +Q D +L+V+A G
Sbjct: 108 APEEKARGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDG 166
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 31.9 bits (69), Expect = 0.23
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 69 NIVVIGHVDSGKSTTTGHLIYKCG 140
N ++ HVD GK+T HL+ CG
Sbjct: 12 NTCILAHVDHGKTTLADHLVASCG 35
>01_06_0734 +
31569017-31569358,31569832-31569906,31570009-31570159,
31570716-31570784,31570864-31571036,31571474-31571611,
31571747-31571872,31571951-31572049,31573175-31573298,
31573465-31573528,31573798-31573852,31573951-31574075,
31574228-31574301,31574436-31574485,31574722-31574808,
31574897-31574947,31575025-31575108,31575400-31575498
Length = 661
Score = 31.5 bits (68), Expect = 0.30
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 69 NIVVIGHVDSGKSTTTGHLIYKCG 140
N+ VI HVD GK+T L+ +CG
Sbjct: 66 NVAVIAHVDHGKTTLMDRLLRQCG 89
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 31.1 bits (67), Expect = 0.39
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +3
Query: 18 QFVIRD*PKMGKEKTHI-NIVVIGHVDSGKSTTTGHLIYKCG 140
+F + + ++ +K +I N+ VI HVD GKST T L+ G
Sbjct: 3 KFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAG 44
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 31.1 bits (67), Expect = 0.39
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +3
Query: 18 QFVIRD*PKMGKEKTHI-NIVVIGHVDSGKSTTTGHLIYKCG 140
+F + + ++ +K +I N+ VI HVD GKST T L+ G
Sbjct: 3 KFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAG 44
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 30.7 bits (66), Expect = 0.52
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +3
Query: 63 HINIVVIGHVDSGKSTTTGHLIYKCG 140
HI+ V++ H+D+GK+TTT ++Y G
Sbjct: 105 HIS-VIMAHIDAGKTTTTERVLYYTG 129
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 30.3 bits (65), Expect = 0.69
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +3
Query: 45 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 140
M K+ N+ VI HVD GKST T L+ G
Sbjct: 13 MDKKDNIRNMSVIAHVDHGKSTLTDSLVAAAG 44
>02_01_0432 -
3144560-3144655,3144792-3144832,3145019-3145094,
3145465-3145542,3146121-3146208,3146613-3146686,
3147445-3147579,3147699-3147770,3148239-3148325,
3148418-3148522,3149028-3149085,3149576-3149634,
3149960-3150056,3150217-3150317,3150443-3150487,
3150619-3150681,3151082-3151147,3151286-3151342,
3151570-3151656,3152063-3152239,3152413-3152625
Length = 624
Score = 29.9 bits (64), Expect = 0.91
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 69 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEK 167
N +I H+D GKST L+ G + KR +++
Sbjct: 79 NFSIIAHIDHGKSTLADKLLELTGTVQKREMKQ 111
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 29.9 bits (64), Expect = 0.91
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 45 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 140
M K+ N+ V+ HVD GKST T L+ G
Sbjct: 13 MDKKHNIRNMSVVAHVDHGKSTLTDSLVAAAG 44
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 29.5 bits (63), Expect = 1.2
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 69 NIVVIGHVDSGKSTTTGHLIYKCGGI 146
NI + H+DSGK+T T ++Y G I
Sbjct: 70 NIGISAHIDSGKTTLTERVLYYTGRI 95
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 28.7 bits (61), Expect = 2.1
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +3
Query: 69 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAXXM 191
N ++ HVD GK++ HLI G ++R E+ A M
Sbjct: 18 NTCILAHVDHGKTSLADHLIAAYGS-ERRVSERMAGSARVM 57
>06_01_0325 -
2366193-2366367,2367063-2367122,2367323-2367463,
2368175-2368288,2368444-2368475,2368736-2368793,
2369263-2369434,2369584-2370334,2370743-2371036
Length = 598
Score = 27.9 bits (59), Expect = 3.7
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +3
Query: 69 NIVVIGHVDSGKSTTTGHLIYKCGGIDK 152
N +I HVD GKST L+ G I K
Sbjct: 59 NFSIIAHVDHGKSTLADRLLELTGTIKK 86
>04_03_0106 +
11325172-11325379,11326590-11326640,11326987-11327073,
11327276-11327373
Length = 147
Score = 27.9 bits (59), Expect = 3.7
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +3
Query: 57 KTHINIVVIGHVDSG 101
K H+N+V IGHVD G
Sbjct: 104 KRHLNVVFIGHVDPG 118
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,582,646
Number of Sequences: 37544
Number of extensions: 146267
Number of successful extensions: 316
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 303
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 802495716
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -