Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0251
         (774 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT030439-1|ABO52859.1|  590|Drosophila melanogaster LD10347p pro...   124   1e-28
BT011462-1|AAR99120.1|  590|Drosophila melanogaster RE29555p pro...   124   1e-28
AE014297-3662|AAF56358.1|  590|Drosophila melanogaster CG11089-P...   124   1e-28
BT011199-1|AAR88561.1|  689|Drosophila melanogaster GH11476p pro...    31   1.8  
AE014297-537|AAF54079.2| 1047|Drosophila melanogaster CG1979-PA ...    29   5.4  
AE001572-1|AAD19791.1|  660|Drosophila melanogaster unknown prot...    29   5.4  

>BT030439-1|ABO52859.1|  590|Drosophila melanogaster LD10347p
           protein.
          Length = 590

 Score =  124 bits (300), Expect = 1e-28
 Identities = 71/136 (52%), Positives = 89/136 (65%), Gaps = 3/136 (2%)
 Frame = +1

Query: 43  SNGKLALLSVSDKTGLLSLAKSLSECGLQLIASXGTATX---ASERXPHSSRCVGHHEST 213
           S+ K+ALLSVSDKTGLL L KSL   G  L+AS GTAT    A  +    S   G  E  
Sbjct: 2   SSSKIALLSVSDKTGLLDLGKSLVALGFDLVASGGTATSLRGAGLKVRDVSEITGAPEML 61

Query: 214 GDARRSGENFTSSGHAGILARLSDSDQEDMKRQKYEMISVVVCNLYPFVXSVSXXXVTVA 393
           G   ++      + HAGIL+R +DSD  DM++Q +++I +VVCNLYPF  +V+   VT+A
Sbjct: 62  GGRVKT---LHPAVHAGILSRTTDSDLADMRKQGFDLIQLVVCNLYPFASTVAKPDVTLA 118

Query: 394 DAVENIDIGXVTLLRA 441
           DAVENIDIG VTLLRA
Sbjct: 119 DAVENIDIGGVTLLRA 134



 Score = 45.6 bits (103), Expect = 8e-05
 Identities = 28/63 (44%), Positives = 32/63 (50%)
 Frame = +3

Query: 444 AKXHDRVTVVCXPADYDAVVKESKRTNIIRRLWAQGRD*P*RRFTHTSDYGPRHIRDYFR 623
           AK H RVTVVC   DYD V+ E K +        Q      + FTHT+ Y    I DYFR
Sbjct: 136 AKNHQRVTVVCEAVDYDRVLSELKASGNTTVETRQAL--ALKAFTHTATYDDA-ISDYFR 192

Query: 624 KXY 632
           K Y
Sbjct: 193 KQY 195



 Score = 35.1 bits (77), Expect = 0.11
 Identities = 23/59 (38%), Positives = 32/59 (54%)
 Frame = +2

Query: 533 TTLGTRQRLALKAFHSYFGLWTSPYSGLLPQAILRXGQAQLTLRYGMNPTSECXPRYSR 709
           TT+ TRQ LALKAF ++   +    S    +     G +QL LRYGMNP  +    Y++
Sbjct: 164 TTVETRQALALKAF-THTATYDDAISDYFRKQY-GSGVSQLPLRYGMNPHQKPAQLYTQ 220


>BT011462-1|AAR99120.1|  590|Drosophila melanogaster RE29555p
           protein.
          Length = 590

 Score =  124 bits (300), Expect = 1e-28
 Identities = 71/136 (52%), Positives = 89/136 (65%), Gaps = 3/136 (2%)
 Frame = +1

Query: 43  SNGKLALLSVSDKTGLLSLAKSLSECGLQLIASXGTATX---ASERXPHSSRCVGHHEST 213
           S+ K+ALLSVSDKTGLL L KSL   G  L+AS GTAT    A  +    S   G  E  
Sbjct: 2   SSSKIALLSVSDKTGLLDLGKSLVALGFDLVASGGTATSLRGAGLKVRDVSEITGAPEML 61

Query: 214 GDARRSGENFTSSGHAGILARLSDSDQEDMKRQKYEMISVVVCNLYPFVXSVSXXXVTVA 393
           G   ++      + HAGIL+R +DSD  DM++Q +++I +VVCNLYPF  +V+   VT+A
Sbjct: 62  GGRVKT---LHPAVHAGILSRTTDSDLADMRKQGFDLIQLVVCNLYPFASTVAKPDVTLA 118

Query: 394 DAVENIDIGXVTLLRA 441
           DAVENIDIG VTLLRA
Sbjct: 119 DAVENIDIGGVTLLRA 134



 Score = 45.6 bits (103), Expect = 8e-05
 Identities = 28/63 (44%), Positives = 32/63 (50%)
 Frame = +3

Query: 444 AKXHDRVTVVCXPADYDAVVKESKRTNIIRRLWAQGRD*P*RRFTHTSDYGPRHIRDYFR 623
           AK H RVTVVC   DYD V+ E K +        Q      + FTHT+ Y    I DYFR
Sbjct: 136 AKNHQRVTVVCEAVDYDRVLSELKASGNTTVETRQAL--ALKAFTHTATYDDA-ISDYFR 192

Query: 624 KXY 632
           K Y
Sbjct: 193 KQY 195



 Score = 35.1 bits (77), Expect = 0.11
 Identities = 23/59 (38%), Positives = 32/59 (54%)
 Frame = +2

Query: 533 TTLGTRQRLALKAFHSYFGLWTSPYSGLLPQAILRXGQAQLTLRYGMNPTSECXPRYSR 709
           TT+ TRQ LALKAF ++   +    S    +     G +QL LRYGMNP  +    Y++
Sbjct: 164 TTVETRQALALKAF-THTATYDDAISDYFRKQY-GSGVSQLPLRYGMNPHQKPAQLYTQ 220


>AE014297-3662|AAF56358.1|  590|Drosophila melanogaster CG11089-PA
           protein.
          Length = 590

 Score =  124 bits (300), Expect = 1e-28
 Identities = 71/136 (52%), Positives = 89/136 (65%), Gaps = 3/136 (2%)
 Frame = +1

Query: 43  SNGKLALLSVSDKTGLLSLAKSLSECGLQLIASXGTATX---ASERXPHSSRCVGHHEST 213
           S+ K+ALLSVSDKTGLL L KSL   G  L+AS GTAT    A  +    S   G  E  
Sbjct: 2   SSSKIALLSVSDKTGLLDLGKSLVALGFDLVASGGTATSLRGAGLKVRDVSEITGAPEML 61

Query: 214 GDARRSGENFTSSGHAGILARLSDSDQEDMKRQKYEMISVVVCNLYPFVXSVSXXXVTVA 393
           G   ++      + HAGIL+R +DSD  DM++Q +++I +VVCNLYPF  +V+   VT+A
Sbjct: 62  GGRVKT---LHPAVHAGILSRTTDSDLADMRKQGFDLIQLVVCNLYPFASTVAKPDVTLA 118

Query: 394 DAVENIDIGXVTLLRA 441
           DAVENIDIG VTLLRA
Sbjct: 119 DAVENIDIGGVTLLRA 134



 Score = 45.6 bits (103), Expect = 8e-05
 Identities = 28/63 (44%), Positives = 32/63 (50%)
 Frame = +3

Query: 444 AKXHDRVTVVCXPADYDAVVKESKRTNIIRRLWAQGRD*P*RRFTHTSDYGPRHIRDYFR 623
           AK H RVTVVC   DYD V+ E K +        Q      + FTHT+ Y    I DYFR
Sbjct: 136 AKNHQRVTVVCEAVDYDRVLSELKASGNTTVETRQAL--ALKAFTHTATYDDA-ISDYFR 192

Query: 624 KXY 632
           K Y
Sbjct: 193 KQY 195



 Score = 35.1 bits (77), Expect = 0.11
 Identities = 23/59 (38%), Positives = 32/59 (54%)
 Frame = +2

Query: 533 TTLGTRQRLALKAFHSYFGLWTSPYSGLLPQAILRXGQAQLTLRYGMNPTSECXPRYSR 709
           TT+ TRQ LALKAF ++   +    S    +     G +QL LRYGMNP  +    Y++
Sbjct: 164 TTVETRQALALKAF-THTATYDDAISDYFRKQY-GSGVSQLPLRYGMNPHQKPAQLYTQ 220


>BT011199-1|AAR88561.1|  689|Drosophila melanogaster GH11476p
           protein.
          Length = 689

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +1

Query: 196 GHHESTGDARRSGENFTSSGHAGILARLSD-SDQEDMKRQK 315
           G  ++TG A +S ++FT  GH     R  D +DQ+  K++K
Sbjct: 648 GQLDTTGSANKSDDHFTKLGHLDSAIREEDETDQKKKKKKK 688


>AE014297-537|AAF54079.2| 1047|Drosophila melanogaster CG1979-PA
           protein.
          Length = 1047

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 16/51 (31%), Positives = 23/51 (45%)
 Frame = +1

Query: 196 GHHESTGDARRSGENFTSSGHAGILARLSDSDQEDMKRQKYEMISVVVCNL 348
           G  ++TG A +S ++FT  GH     R  D   +  K    E   V + NL
Sbjct: 648 GQLDTTGSANKSDDHFTKLGHLDSAIREEDETDQKKKDTPNEDYFVKLSNL 698


>AE001572-1|AAD19791.1|  660|Drosophila melanogaster unknown
           protein.
          Length = 660

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 16/51 (31%), Positives = 23/51 (45%)
 Frame = +1

Query: 196 GHHESTGDARRSGENFTSSGHAGILARLSDSDQEDMKRQKYEMISVVVCNL 348
           G  ++TG A +S ++FT  GH     R  D   +  K    E   V + NL
Sbjct: 602 GQLDTTGSANKSDDHFTKLGHLDSAIREEDETDQKKKDTPNEDYFVKLSNL 652


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,520,478
Number of Sequences: 53049
Number of extensions: 560673
Number of successful extensions: 1538
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1529
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3581842374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)