Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0250
(746 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 32 0.100
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 30 0.40
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 27 2.8
SPAC19A8.07c |||U3 snoRNP-associated protein Imp4 |Schizosacchar... 27 3.8
SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|ch... 26 5.0
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 26 5.0
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 26 5.0
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 25 8.7
SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces p... 25 8.7
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 31.9 bits (69), Expect = 0.100
Identities = 21/66 (31%), Positives = 31/66 (46%)
Frame = +1
Query: 307 IRSEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEV 486
+ SE+T + T E +E+ RE I LRS L D + VE + E + E+
Sbjct: 974 LASEKTLEMMNETHEQFKHLVESEISTREEKITSLRSELLDLNKRVEVLKEEKESSSKEL 1033
Query: 487 YKAIED 504
K +ED
Sbjct: 1034 AKQLED 1039
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 29.9 bits (64), Expect = 0.40
Identities = 12/57 (21%), Positives = 31/57 (54%)
Frame = +1
Query: 322 TNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYK 492
T N I++ + + + HEE + ELR++++++++ E+ ++ E+Y+
Sbjct: 85 TLNNILSMRTETGSMAKAHEEVSQQINTELRNKIREYIDQTEQQKVVAANAIEELYQ 141
>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 3655
Score = 27.1 bits (57), Expect = 2.8
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +2
Query: 8 DAIQLFRSLCRLKVEAMEVETKSTEIRCQEMSKGGLAYE 124
D L+ L R + +E E ++ +C E K L YE
Sbjct: 2536 DEHDLYHGLWRRRANFLETEVATSHEQCHEWEKAQLVYE 2574
>SPAC19A8.07c |||U3 snoRNP-associated protein Imp4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 289
Score = 26.6 bits (56), Expect = 3.8
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +1
Query: 340 ATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQ--QTAEVYKAIEDKRP 513
A +E + ++E +EA +NE R L+ LEG ++ L++ Q + YK E +
Sbjct: 5 AVRERRQFIYKRNQELQEAKLNEKRRALRKALEGNKELNKDLQEDSQLQKDYKYDESRAT 64
Query: 514 Q 516
Q
Sbjct: 65 Q 65
>SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1822
Score = 26.2 bits (55), Expect = 5.0
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2
Query: 8 DAIQLFRSLCRLKVEAMEVETKSTEIRCQEM 100
DA +FRS+CRL V + K + IR Q M
Sbjct: 388 DAFLVFRSMCRLAVRQTSPD-KVSNIRSQAM 417
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 26.2 bits (55), Expect = 5.0
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 316 EQTNNFIVATKEA-LDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAE 483
+Q VA ++A +E K E + + + SR+K + +E TRL + Q E
Sbjct: 460 KQVEELTVALNSGKMNAIVEAESSKNELWDSMMVSRMKTQEQSIELTRLYKQLQDIE 516
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 26.2 bits (55), Expect = 5.0
Identities = 11/41 (26%), Positives = 24/41 (58%)
Frame = +1
Query: 349 EALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQ 471
E L K+++ ++++ INEL R+K + V + T+++
Sbjct: 530 EGLTLKIDSITKEKDRLINELEQRIKSYEVNVSELNGTIDE 570
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 25.4 bits (53), Expect = 8.7
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +2
Query: 53 AMEVETKSTEIRCQEMSKGGLAYEVILAEPVGVPVPRRADSPEKTPS 193
A+ ETKST ++ GG A +A P +P P +P P+
Sbjct: 867 AITPETKST---VNQIMSGGEALAAPVAVPAPIPAPVAEPAPPAAPA 910
>SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 464
Score = 25.4 bits (53), Expect = 8.7
Identities = 16/62 (25%), Positives = 26/62 (41%)
Frame = +1
Query: 313 SEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYK 492
SEQT A + + K E E L++ KD+ ++K LE++ + K
Sbjct: 391 SEQTQLVEEALTKVMKEKYREKENNLELLETNLKTHHKDYKHALKKRITALEEEKNRLIK 450
Query: 493 AI 498
I
Sbjct: 451 EI 452
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,356,088
Number of Sequences: 5004
Number of extensions: 39137
Number of successful extensions: 162
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 162
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 355273338
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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