Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0250
(746 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_10683| Best HMM Match : Stathmin (HMM E-Value=0.0011) 39 0.005
SB_14299| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.33
SB_21989| Best HMM Match : Spectrin (HMM E-Value=0) 31 0.99
SB_52106| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0098) 30 1.7
SB_100| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_12752| Best HMM Match : Borrelia_orfA (HMM E-Value=0.15) 29 5.3
SB_44118| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_24482| Best HMM Match : KID (HMM E-Value=0.045) 28 7.0
SB_19771| Best HMM Match : DUF1014 (HMM E-Value=1.4) 28 7.0
SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0) 28 7.0
SB_56390| Best HMM Match : CHASE3 (HMM E-Value=0.042) 28 9.2
SB_47624| Best HMM Match : Caudal_act (HMM E-Value=0.66) 28 9.2
SB_24737| Best HMM Match : KID (HMM E-Value=0.096) 28 9.2
SB_6241| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_7677| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
>SB_10683| Best HMM Match : Stathmin (HMM E-Value=0.0011)
Length = 299
Score = 38.7 bits (86), Expect = 0.005
Identities = 22/67 (32%), Positives = 36/67 (53%)
Frame = +1
Query: 307 IRSEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEV 486
I EQ +E + KME +EKR++Y+ L++RL + VE+ R T+E+
Sbjct: 189 IAQEQIEQQSKLIEEKIMQKMEMTKEKRDSYMEALKTRLHEKSLDVEQKRQTMEEIQMFQ 248
Query: 487 YKAIEDK 507
K +E+K
Sbjct: 249 RKILEEK 255
>SB_14299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 263
Score = 32.7 bits (71), Expect = 0.33
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Frame = +1
Query: 340 ATKEALDAKMETHEEKREAYINELRSRLKDHLEG-VEKTRLTLEQQTAEV-YKA--IEDK 507
A ++AL+A +E R+ + ELR ++ + E +E+ R+ E+Q AE+ Y+ E K
Sbjct: 52 AIRDALNAAEAKAQEDRKQALEELRKKMNEEREQCLEQARIRAEEQMAEIRYRCEIAEKK 111
Query: 508 RPQL 519
R +L
Sbjct: 112 RARL 115
>SB_21989| Best HMM Match : Spectrin (HMM E-Value=0)
Length = 1805
Score = 31.1 bits (67), Expect = 0.99
Identities = 14/58 (24%), Positives = 34/58 (58%)
Frame = +1
Query: 346 KEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKRPQL 519
+E ++ T E EA +++L + EG+ +++++L++ +E++ +EDK +L
Sbjct: 447 QEDIERHQLTKERLHEA-VSDLLELTRGETEGLRESQISLDENWSELWALLEDKEEEL 503
>SB_52106| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0098)
Length = 1177
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/59 (25%), Positives = 32/59 (54%)
Frame = +1
Query: 340 ATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKRPQ 516
+ KE +M T +EK + + ++L+D L K++ Q+ +E Y+A++++ Q
Sbjct: 423 SNKEKEYKRMATEQEKESKSLRKKNNQLEDELTNQGKSKEQEAQEHSEKYEALKNEMQQ 481
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/68 (22%), Positives = 38/68 (55%)
Frame = +1
Query: 304 RIRSEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAE 483
R ++ Q + + ++ + + + H EK EA NE++ + K+ L+ +++ +E++ E
Sbjct: 444 RKKNNQLEDELTNQGKSKEQEAQEHSEKYEALKNEMQQQGKEWLKQDKESHKQIEEREKE 503
Query: 484 VYKAIEDK 507
K++ D+
Sbjct: 504 C-KSLRDE 510
>SB_100| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 113
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +1
Query: 574 EXQVRKVRAGNQEKFQQLRERHSQEKLAAGRRPTSAHXKLXQRE--KTXANHE 726
E +VR+ AGN + LRE + + RRP H K ++ +T +HE
Sbjct: 2 EQRVRQEEAGNMLTWTLLREENVNMRKQYSRRPIVTHAKSSHKKTCRTVTSHE 54
>SB_12752| Best HMM Match : Borrelia_orfA (HMM E-Value=0.15)
Length = 1774
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +1
Query: 346 KEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTA 480
K+ D+ E H+E ++ + E K H+E ++ T + +EQQ A
Sbjct: 1422 KKVQDSSNEIHKENQD--LREELKMAKRHIESLKSTLIQVEQQAA 1464
>SB_44118| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 611
Score = 28.3 bits (60), Expect = 7.0
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = -2
Query: 298 PPRSWPSSEQWRPSY 254
PP ++PSS+QW P+Y
Sbjct: 508 PPGAYPSSDQWIPAY 522
>SB_24482| Best HMM Match : KID (HMM E-Value=0.045)
Length = 1714
Score = 28.3 bits (60), Expect = 7.0
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = +1
Query: 307 IRSEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEV 486
+R ++ ++ KE M+ E+KR A INEL R +E LT + +
Sbjct: 1581 LRGQERLREVLEKKERELDDMQNLEKKRSAAINELMQR-----RDMESQGLTEASKICNL 1635
Query: 487 YKAIEDK 507
KA++DK
Sbjct: 1636 EKALKDK 1642
>SB_19771| Best HMM Match : DUF1014 (HMM E-Value=1.4)
Length = 606
Score = 28.3 bits (60), Expect = 7.0
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 6/49 (12%)
Frame = +1
Query: 382 EKREAY-INELRSRLKDHLEGV-----EKTRLTLEQQTAEVYKAIEDKR 510
E+R Y I+ + RLK+ EGV E R+ ++Q YKAIE +R
Sbjct: 159 ERRMQYMIHARQERLKEFQEGVKCRVKEMERIKRDEQMGNTYKAIEFER 207
>SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0)
Length = 1997
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +1
Query: 301 SRIRSEQTNNFIVATK-EALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQT 477
SR+ SE + I K + +A +E ++K + INE R +L++ ++ ++ +
Sbjct: 1455 SRLNSELEDALIDLEKAQTNNANLEKKQKKIDIQINEWRVKLEEVQADLDNSQKEARNYS 1514
Query: 478 AEVYK 492
E+YK
Sbjct: 1515 TEMYK 1519
>SB_56390| Best HMM Match : CHASE3 (HMM E-Value=0.042)
Length = 440
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/45 (26%), Positives = 25/45 (55%)
Frame = +1
Query: 352 ALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEV 486
AL K + + +N+ +L + +EG++ T +TL+QQ ++
Sbjct: 235 ALQKKYSDELKSSQDELNDFVIQLDEEVEGMQSTIMTLQQQIKDI 279
>SB_47624| Best HMM Match : Caudal_act (HMM E-Value=0.66)
Length = 424
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +3
Query: 531 DENLKKMIXRLRET*GTSSQGPRRQPGEVPAASRAPFP 644
+E LK + LRE SS+ ++ ++P +S P P
Sbjct: 37 EEQLKAQLKELREQWSLSSEDKEKEKRDLPKSSMEPLP 74
>SB_24737| Best HMM Match : KID (HMM E-Value=0.096)
Length = 636
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +1
Query: 382 EKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDK 507
E RE I++L LKD + + TLEQ A++ + +E K
Sbjct: 148 EDREKSIDKLEKELKDQEAKHNRQKNTLEQTVAKMKEVMERK 189
>SB_6241| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 933
Score = 27.9 bits (59), Expect = 9.2
Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
Frame = +3
Query: 606 PGEVPAASRAP-FPGEACSR----PPTDVCSLXALXERENXRKP 722
P ++P R P +P A SR PP D S AL + N KP
Sbjct: 681 PRQLPTPGRTPSYPETAISRTAAIPPPDFTSTPALEQVNNHEKP 724
>SB_7677| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 497
Score = 27.9 bits (59), Expect = 9.2
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = +1
Query: 319 QTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEK--TRLTLEQQTAEVYK 492
QT I+ E ME + + E EL +L+ K T+L L Q+TAE YK
Sbjct: 401 QTQILILQVHEDYRKLMEQKQAEEERCRKELEEKLQTLERDSHKYRTKLELAQKTAETYK 460
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,095,439
Number of Sequences: 59808
Number of extensions: 357826
Number of successful extensions: 1428
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1424
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2022185256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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