Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0250
         (746 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001751-1|AAN71506.1|  257|Drosophila melanogaster RH02809p pro...    79   5e-15
AY061071-1|AAL28619.1|  250|Drosophila melanogaster LD04103p pro...    79   5e-15
AF202990-1|AAG35633.1|  254|Drosophila melanogaster STATHMIN-19 ...    79   5e-15
AF202989-1|AAG35632.1|  174|Drosophila melanogaster STATHMIN-13 ...    79   5e-15
AF202774-1|AAG35628.1|  257|Drosophila melanogaster stathmin-14 ...    79   5e-15
AF202773-1|AAG35627.1|  234|Drosophila melanogaster stathmin-1 p...    79   5e-15
AE014134-1054|AAF52345.2|  250|Drosophila melanogaster CG31641-P...    79   5e-15
AE014134-1053|AAN10581.1|  302|Drosophila melanogaster CG31641-P...    79   5e-15
AE014134-1052|AAN10580.1|  257|Drosophila melanogaster CG31641-P...    79   5e-15
AY069568-1|AAL39713.1|  513|Drosophila melanogaster LD29830p pro...    29   5.1  
AF055719-1|AAC32822.3|  513|Drosophila melanogaster splicing fac...    29   5.1  
AE014134-1720|AAF52825.1|  513|Drosophila melanogaster CG4602-PA...    29   5.1  
BT011426-1|AAR96218.1|  353|Drosophila melanogaster AT01275p pro...    29   6.7  
AY051441-1|AAK92865.1|  513|Drosophila melanogaster GH11294p pro...    29   6.7  
AE013599-1856|AAF58272.1|  513|Drosophila melanogaster CG8503-PA...    29   6.7  
AE014297-1879|AAF55082.2| 2002|Drosophila melanogaster CG3389-PA...    29   8.9  

>BT001751-1|AAN71506.1|  257|Drosophila melanogaster RH02809p
           protein.
          Length = 257

 Score = 79.4 bits (187), Expect = 5e-15
 Identities = 38/69 (55%), Positives = 50/69 (72%)
 Frame = +1

Query: 301 SRIRSEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTA 480
           +R + E TN FI  TKE L++KME H EKREA I++++ +LK H + +EKTR TLEQQ A
Sbjct: 87  TRKKDEITNEFITQTKEQLESKMELHVEKREAIISDMKEKLKIHAQDIEKTRETLEQQKA 146

Query: 481 EVYKAIEDK 507
              KAIE+K
Sbjct: 147 NEQKAIEEK 155



 Score = 63.7 bits (148), Expect = 3e-10
 Identities = 35/65 (53%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
 Frame = +2

Query: 62  VETKSTEIRCQEMSKGGLAYEVILAEPV-GVPVPRRADSPEKTPSVXXXXXXXXXXXXRR 238
           V+T++TEIRCQE S+GGL+YEVILAEP   V VP+R  +P K  SV            RR
Sbjct: 6   VDTEATEIRCQEKSRGGLSYEVILAEPAPNVAVPKRPVTPGKNVSVEEIEQKLKAAEERR 65

Query: 239 RSLEA 253
            SLEA
Sbjct: 66  ISLEA 70


>AY061071-1|AAL28619.1|  250|Drosophila melanogaster LD04103p
           protein.
          Length = 250

 Score = 79.4 bits (187), Expect = 5e-15
 Identities = 38/69 (55%), Positives = 50/69 (72%)
 Frame = +1

Query: 301 SRIRSEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTA 480
           +R + E TN FI  TKE L++KME H EKREA I++++ +LK H + +EKTR TLEQQ A
Sbjct: 132 TRKKDEITNEFITQTKEQLESKMELHVEKREAIISDMKEKLKIHAQDIEKTRETLEQQKA 191

Query: 481 EVYKAIEDK 507
              KAIE+K
Sbjct: 192 NEQKAIEEK 200



 Score = 59.3 bits (137), Expect = 5e-09
 Identities = 34/66 (51%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
 Frame = +2

Query: 59  EVETKSTEIRCQEMSKGGLAYEVILAEPV-GVPVPRRADSPEKTPSVXXXXXXXXXXXXR 235
           +V+  +TEIRCQE S+GGL+YEVILAEP   V VP+R  +P K  SV            R
Sbjct: 50  KVKFITTEIRCQEKSRGGLSYEVILAEPAPNVAVPKRPVTPGKNVSVEEIEQKLKAAEER 109

Query: 236 RRSLEA 253
           R SLEA
Sbjct: 110 RISLEA 115


>AF202990-1|AAG35633.1|  254|Drosophila melanogaster STATHMIN-19
           protein.
          Length = 254

 Score = 79.4 bits (187), Expect = 5e-15
 Identities = 38/69 (55%), Positives = 50/69 (72%)
 Frame = +1

Query: 301 SRIRSEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTA 480
           +R + E TN FI  TKE L++KME H EKREA I++++ +LK H + +EKTR TLEQQ A
Sbjct: 84  TRKKDEITNEFITQTKEQLESKMELHVEKREAIISDMKEKLKIHAQDIEKTRETLEQQKA 143

Query: 481 EVYKAIEDK 507
              KAIE+K
Sbjct: 144 NEQKAIEEK 152



 Score = 59.3 bits (137), Expect = 5e-09
 Identities = 34/66 (51%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
 Frame = +2

Query: 59  EVETKSTEIRCQEMSKGGLAYEVILAEPV-GVPVPRRADSPEKTPSVXXXXXXXXXXXXR 235
           +V+  +TEIRCQE S+GGL+YEVILAEP   V VP+R  +P K  SV            R
Sbjct: 2   KVKFITTEIRCQEKSRGGLSYEVILAEPAPNVAVPKRPVTPGKNVSVEEIEQKLKAAEER 61

Query: 236 RRSLEA 253
           R SLEA
Sbjct: 62  RISLEA 67


>AF202989-1|AAG35632.1|  174|Drosophila melanogaster STATHMIN-13
           protein.
          Length = 174

 Score = 79.4 bits (187), Expect = 5e-15
 Identities = 38/69 (55%), Positives = 50/69 (72%)
 Frame = +1

Query: 301 SRIRSEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTA 480
           +R + E TN FI  TKE L++KME H EKREA I++++ +LK H + +EKTR TLEQQ A
Sbjct: 87  TRKKDEITNEFITQTKEQLESKMELHVEKREAIISDMKEKLKIHAQDIEKTRETLEQQKA 146

Query: 481 EVYKAIEDK 507
              KAIE+K
Sbjct: 147 NEQKAIEEK 155



 Score = 63.7 bits (148), Expect = 3e-10
 Identities = 35/65 (53%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
 Frame = +2

Query: 62  VETKSTEIRCQEMSKGGLAYEVILAEPV-GVPVPRRADSPEKTPSVXXXXXXXXXXXXRR 238
           V+T++TEIRCQE S+GGL+YEVILAEP   V VP+R  +P K  SV            RR
Sbjct: 6   VDTEATEIRCQEKSRGGLSYEVILAEPAPNVAVPKRPVTPGKNVSVEEIEQKLKAAEERR 65

Query: 239 RSLEA 253
            SLEA
Sbjct: 66  ISLEA 70


>AF202774-1|AAG35628.1|  257|Drosophila melanogaster stathmin-14
           protein.
          Length = 257

 Score = 79.4 bits (187), Expect = 5e-15
 Identities = 38/69 (55%), Positives = 50/69 (72%)
 Frame = +1

Query: 301 SRIRSEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTA 480
           +R + E TN FI  TKE L++KME H EKREA I++++ +LK H + +EKTR TLEQQ A
Sbjct: 87  TRKKDEITNEFITQTKEQLESKMELHVEKREAIISDMKEKLKIHAQDIEKTRETLEQQKA 146

Query: 481 EVYKAIEDK 507
              KAIE+K
Sbjct: 147 NEQKAIEEK 155



 Score = 63.7 bits (148), Expect = 3e-10
 Identities = 35/65 (53%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
 Frame = +2

Query: 62  VETKSTEIRCQEMSKGGLAYEVILAEPV-GVPVPRRADSPEKTPSVXXXXXXXXXXXXRR 238
           V+T++TEIRCQE S+GGL+YEVILAEP   V VP+R  +P K  SV            RR
Sbjct: 6   VDTEATEIRCQEKSRGGLSYEVILAEPAPNVAVPKRPVTPGKNVSVEEIEQKLKAAEERR 65

Query: 239 RSLEA 253
            SLEA
Sbjct: 66  ISLEA 70


>AF202773-1|AAG35627.1|  234|Drosophila melanogaster stathmin-1
           protein.
          Length = 234

 Score = 79.4 bits (187), Expect = 5e-15
 Identities = 38/69 (55%), Positives = 50/69 (72%)
 Frame = +1

Query: 301 SRIRSEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTA 480
           +R + E TN FI  TKE L++KME H EKREA I++++ +LK H + +EKTR TLEQQ A
Sbjct: 87  TRKKDEITNEFITQTKEQLESKMELHVEKREAIISDMKEKLKIHAQDIEKTRETLEQQKA 146

Query: 481 EVYKAIEDK 507
              KAIE+K
Sbjct: 147 NEQKAIEEK 155



 Score = 63.7 bits (148), Expect = 3e-10
 Identities = 35/65 (53%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
 Frame = +2

Query: 62  VETKSTEIRCQEMSKGGLAYEVILAEPV-GVPVPRRADSPEKTPSVXXXXXXXXXXXXRR 238
           V+T++TEIRCQE S+GGL+YEVILAEP   V VP+R  +P K  SV            RR
Sbjct: 6   VDTEATEIRCQEKSRGGLSYEVILAEPAPNVAVPKRPVTPGKNVSVEEIEQKLKAAEERR 65

Query: 239 RSLEA 253
            SLEA
Sbjct: 66  ISLEA 70


>AE014134-1054|AAF52345.2|  250|Drosophila melanogaster CG31641-PA,
           isoform A protein.
          Length = 250

 Score = 79.4 bits (187), Expect = 5e-15
 Identities = 38/69 (55%), Positives = 50/69 (72%)
 Frame = +1

Query: 301 SRIRSEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTA 480
           +R + E TN FI  TKE L++KME H EKREA I++++ +LK H + +EKTR TLEQQ A
Sbjct: 132 TRKKDEITNEFITQTKEQLESKMELHVEKREAIISDMKEKLKIHAQDIEKTRETLEQQKA 191

Query: 481 EVYKAIEDK 507
              KAIE+K
Sbjct: 192 NEQKAIEEK 200



 Score = 59.3 bits (137), Expect = 5e-09
 Identities = 34/66 (51%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
 Frame = +2

Query: 59  EVETKSTEIRCQEMSKGGLAYEVILAEPV-GVPVPRRADSPEKTPSVXXXXXXXXXXXXR 235
           +V+  +TEIRCQE S+GGL+YEVILAEP   V VP+R  +P K  SV            R
Sbjct: 50  KVKFITTEIRCQEKSRGGLSYEVILAEPAPNVAVPKRPVTPGKNVSVEEIEQKLKAAEER 109

Query: 236 RRSLEA 253
           R SLEA
Sbjct: 110 RISLEA 115


>AE014134-1053|AAN10581.1|  302|Drosophila melanogaster CG31641-PB,
           isoform B protein.
          Length = 302

 Score = 79.4 bits (187), Expect = 5e-15
 Identities = 38/69 (55%), Positives = 50/69 (72%)
 Frame = +1

Query: 301 SRIRSEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTA 480
           +R + E TN FI  TKE L++KME H EKREA I++++ +LK H + +EKTR TLEQQ A
Sbjct: 132 TRKKDEITNEFITQTKEQLESKMELHVEKREAIISDMKEKLKIHAQDIEKTRETLEQQKA 191

Query: 481 EVYKAIEDK 507
              KAIE+K
Sbjct: 192 NEQKAIEEK 200



 Score = 59.3 bits (137), Expect = 5e-09
 Identities = 34/66 (51%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
 Frame = +2

Query: 59  EVETKSTEIRCQEMSKGGLAYEVILAEPV-GVPVPRRADSPEKTPSVXXXXXXXXXXXXR 235
           +V+  +TEIRCQE S+GGL+YEVILAEP   V VP+R  +P K  SV            R
Sbjct: 50  KVKFITTEIRCQEKSRGGLSYEVILAEPAPNVAVPKRPVTPGKNVSVEEIEQKLKAAEER 109

Query: 236 RRSLEA 253
           R SLEA
Sbjct: 110 RISLEA 115


>AE014134-1052|AAN10580.1|  257|Drosophila melanogaster CG31641-PC,
           isoform C protein.
          Length = 257

 Score = 79.4 bits (187), Expect = 5e-15
 Identities = 38/69 (55%), Positives = 50/69 (72%)
 Frame = +1

Query: 301 SRIRSEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTA 480
           +R + E TN FI  TKE L++KME H EKREA I++++ +LK H + +EKTR TLEQQ A
Sbjct: 87  TRKKDEITNEFITQTKEQLESKMELHVEKREAIISDMKEKLKIHAQDIEKTRETLEQQKA 146

Query: 481 EVYKAIEDK 507
              KAIE+K
Sbjct: 147 NEQKAIEEK 155



 Score = 63.7 bits (148), Expect = 3e-10
 Identities = 35/65 (53%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
 Frame = +2

Query: 62  VETKSTEIRCQEMSKGGLAYEVILAEPV-GVPVPRRADSPEKTPSVXXXXXXXXXXXXRR 238
           V+T++TEIRCQE S+GGL+YEVILAEP   V VP+R  +P K  SV            RR
Sbjct: 6   VDTEATEIRCQEKSRGGLSYEVILAEPAPNVAVPKRPVTPGKNVSVEEIEQKLKAAEERR 65

Query: 239 RSLEA 253
            SLEA
Sbjct: 66  ISLEA 70


>AY069568-1|AAL39713.1|  513|Drosophila melanogaster LD29830p
           protein.
          Length = 513

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 32/129 (24%), Positives = 44/129 (34%), Gaps = 1/129 (0%)
 Frame = +3

Query: 261 GRHCSEDGQDRGGVPHPQRADE*LHRRHQGGSRRQDGDPRGK-TRGLHQRAALPSQGSS* 437
           G+H S     R    H + +      R +GG   +    RGK +R  H+R+   S+ S  
Sbjct: 333 GKHSSRSRSKRSRSRHRRSSSRSRRSRSRGGKHSRSSRSRGKRSRSRHRRSTSRSRSSR- 391

Query: 438 GR*EDQVDPGTADRGSVQGHRR*ETTAXDKRDENLKKMIXRLRET*GTSSQGPRRQPGEV 617
                    GT   GS  G R        K   + K      R     SS  P    G  
Sbjct: 392 -------SHGTGGGGSGNGKRSRSRERSKKSHRSEKHSSRSPRSRSKRSSPSPPPATGSK 444

Query: 618 PAASRAPFP 644
             +SR+  P
Sbjct: 445 SRSSRSKDP 453


>AF055719-1|AAC32822.3|  513|Drosophila melanogaster splicing factor
           SRp54 protein.
          Length = 513

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 32/129 (24%), Positives = 44/129 (34%), Gaps = 1/129 (0%)
 Frame = +3

Query: 261 GRHCSEDGQDRGGVPHPQRADE*LHRRHQGGSRRQDGDPRGK-TRGLHQRAALPSQGSS* 437
           G+H S     R    H + +      R +GG   +    RGK +R  H+R+   S+ S  
Sbjct: 333 GKHSSRSRSKRSRSRHRRSSSRSRRSRSRGGKHSRSSRSRGKRSRSRHRRSTSRSRSSR- 391

Query: 438 GR*EDQVDPGTADRGSVQGHRR*ETTAXDKRDENLKKMIXRLRET*GTSSQGPRRQPGEV 617
                    GT   GS  G R        K   + K      R     SS  P    G  
Sbjct: 392 -------SHGTGGGGSGNGKRSRSRERTKKSHRSEKHSSRSPRSRSKRSSPSPPPATGSK 444

Query: 618 PAASRAPFP 644
             +SR+  P
Sbjct: 445 SRSSRSKDP 453


>AE014134-1720|AAF52825.1|  513|Drosophila melanogaster CG4602-PA
           protein.
          Length = 513

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 32/129 (24%), Positives = 44/129 (34%), Gaps = 1/129 (0%)
 Frame = +3

Query: 261 GRHCSEDGQDRGGVPHPQRADE*LHRRHQGGSRRQDGDPRGK-TRGLHQRAALPSQGSS* 437
           G+H S     R    H + +      R +GG   +    RGK +R  H+R+   S+ S  
Sbjct: 333 GKHSSRSRSKRSRSRHRRSSSRSRRSRSRGGKHSRSSRSRGKRSRSRHRRSTSRSRSSR- 391

Query: 438 GR*EDQVDPGTADRGSVQGHRR*ETTAXDKRDENLKKMIXRLRET*GTSSQGPRRQPGEV 617
                    GT   GS  G R        K   + K      R     SS  P    G  
Sbjct: 392 -------SHGTGGGGSGNGKRSRSRERSKKSHRSEKHSSRSPRSRSKRSSPSPPPATGSK 444

Query: 618 PAASRAPFP 644
             +SR+  P
Sbjct: 445 SRSSRSKDP 453


>BT011426-1|AAR96218.1|  353|Drosophila melanogaster AT01275p
           protein.
          Length = 353

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 35/125 (28%), Positives = 50/125 (40%), Gaps = 4/125 (3%)
 Frame = +1

Query: 304 RIRSEQTNNFIVATKEALDAKMETHEEKREA--YINELRSRLKDHLEGVEKTRLTLEQQT 477
           R   E   N++   +     K++  + +REA     ELR RL    E  E+      QQT
Sbjct: 189 RSTGEAYENWLSGKQRQCQYKLQAQQAEREAQRQRTELRQRLAK--EKYEQWCQQKAQQT 246

Query: 478 AEVYKAIEDKR-PQLPXXXXXXXXXXXXVCAKHEXQVRKVRAGNQEKFQQLR-ERHSQEK 651
               K I+  R  QLP                 E ++ K+R   Q + +Q   ER  QE+
Sbjct: 247 TSTAKPIKPGRSAQLPPQKNMASVQHHL----QEWELHKLRLLEQRRLEQRNAERRRQEE 302

Query: 652 LAAGR 666
            AA R
Sbjct: 303 KAARR 307


>AY051441-1|AAK92865.1|  513|Drosophila melanogaster GH11294p
           protein.
          Length = 513

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +2

Query: 17  QLFRSLCRLKVEAMEVETKSTEIRCQEMSKGGL 115
           +LF+  C   V+  E++T  + I+C++   GGL
Sbjct: 292 KLFKCACERCVDVTELDTNYSAIKCEDRQCGGL 324


>AE013599-1856|AAF58272.1|  513|Drosophila melanogaster CG8503-PA
           protein.
          Length = 513

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +2

Query: 17  QLFRSLCRLKVEAMEVETKSTEIRCQEMSKGGL 115
           +LF+  C   V+  E++T  + I+C++   GGL
Sbjct: 292 KLFKCACERCVDVTELDTNYSAIKCEDRQCGGL 324


>AE014297-1879|AAF55082.2| 2002|Drosophila melanogaster CG3389-PA
            protein.
          Length = 2002

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 16/46 (34%), Positives = 22/46 (47%)
 Frame = +1

Query: 349  EALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEV 486
            EA DA    +       + E+R  L + LE V K    L+Q+T EV
Sbjct: 1649 EATDADEGDNGRIGYYQVGEIRQTLSEGLENVRKAPFLLDQETGEV 1694


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,699,197
Number of Sequences: 53049
Number of extensions: 531673
Number of successful extensions: 2405
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2394
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3396574665
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)