Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0250
         (746 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex det...    25   0.75 
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               24   1.7  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    23   4.0  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    23   4.0  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           23   4.0  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           23   4.0  
AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex det...    22   5.3  
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    22   5.3  
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          21   9.3  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    21   9.3  

>AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 25.0 bits (52), Expect = 0.75
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = +1

Query: 568 KHEXQVRKVRAGNQEKFQQLRERHSQEK 651
           K+E + RK R  ++E+F+  RER   ++
Sbjct: 284 KNEREYRKYRETSKERFRDRRERERSKE 311


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 9/52 (17%)
 Frame = +1

Query: 379 EEKREAYINELRSRLKDHLEGV---------EKTRLTLEQQTAEVYKAIEDK 507
           E+K  + + +  S+L D LE V         E  +LTL Q+TA+ +K ++DK
Sbjct: 354 EKKNLSKVIDQHSQLIDTLENVLAIVDRLMDETNQLTL-QETADAFKDLQDK 404


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -2

Query: 310 GCGTPPRSWPSSEQWRPSYSFQATSPL 230
           G G    SW  +  WR ++S+    PL
Sbjct: 214 GYGLIVYSWEQNRSWRITHSYFMPDPL 240


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -3

Query: 408 LVDVGLAFFLVGLHLGVESLLGGDDEVI 325
           L+D  + F  +   LG+   L  +DEV+
Sbjct: 146 LMDSDVIFVTINYRLGILGFLSTEDEVV 173


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -3

Query: 408 LVDVGLAFFLVGLHLGVESLLGGDDEVI 325
           L+D  + F  +   LG+   L  +DEV+
Sbjct: 17  LMDSDVIFVTINYRLGILGFLSTEDEVV 44


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -3

Query: 408 LVDVGLAFFLVGLHLGVESLLGGDDEVI 325
           L+D  + F  +   LG+   L  +DEV+
Sbjct: 146 LMDSDVIFVTINYRLGILGFLSTEDEVV 173


>AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +2

Query: 2   ASDAIQLFRSLCRLKVEAMEVETKSTEIR 88
           +SD I LFR    +++ A E++    EIR
Sbjct: 108 SSDDISLFRGPEGIQINATELQKIELEIR 136


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 6/17 (35%), Positives = 9/17 (52%)
 Frame = +3

Query: 636 PFPGEACSRPPTDVCSL 686
           P P   C+ P  + CS+
Sbjct: 158 PIPASCCNSPENNTCSI 174


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +1

Query: 469 QQTAEVYKAIEDKRPQL 519
           +Q  ++  A+E+KRP+L
Sbjct: 96  EQLTKLNNAVEEKRPEL 112


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +1

Query: 469 QQTAEVYKAIEDKRPQL 519
           +Q  ++  A+E+KRP+L
Sbjct: 218 EQLTKLNNAVEEKRPEL 234


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,897
Number of Sequences: 438
Number of extensions: 3170
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23388480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)