Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0249
         (766 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    27   0.12 
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    23   2.7  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    23   3.5  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   8.2  

>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 27.5 bits (58), Expect = 0.12
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = +1

Query: 106 YQKLITAVTSLVQFLRTQLNEFGIINTTPDFTNFFAAPSSIK 231
           +QKL     + ++ L  Q   FG++  TPD + F   PSS++
Sbjct: 4   FQKLYQKFVNSIRILLFQSRIFGLVTFTPDRSKF--RPSSLR 43


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -1

Query: 718 PQVLKCAERPMSPYNEPNTDF 656
           P +++CA R   P  +P T F
Sbjct: 102 PPIVRCALRKHKPNRKPRTPF 122


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 583 FNGASXGFPDSSKR 624
           FNG + G PD+SK+
Sbjct: 217 FNGFARGIPDTSKQ 230


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 496 QLQNENPRLLFWKIR 540
           Q + ENP +  W+IR
Sbjct: 123 QYKRENPSIFSWEIR 137


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,691
Number of Sequences: 336
Number of extensions: 3578
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)