Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0249
         (766 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0007 + 6056281-6057024,6057273-6057539,6057622-6057765,605...    35   0.062
02_05_0167 - 26415319-26415494,26415591-26415840,26415909-264159...    34   0.11 
04_03_0660 + 18463011-18463322,18463424-18463516,18464500-184646...    30   1.8  
01_06_0360 - 28729006-28729446,28729810-28730258,28730499-28731480     29   5.4  
01_06_1732 - 39531577-39531726,39531809-39531925,39532175-395323...    28   7.1  
01_06_0872 + 32609792-32610178,32611262-32611387,32611477-326115...    28   7.1  
11_04_0307 + 16185405-16185713,16185847-16185942,16186626-161867...    28   9.4  

>02_02_0007 +
           6056281-6057024,6057273-6057539,6057622-6057765,
           6057844-6058191,6058713-6059102
          Length = 630

 Score = 35.1 bits (77), Expect = 0.062
 Identities = 19/44 (43%), Positives = 22/44 (50%)
 Frame = +3

Query: 399 HLHVRRSPPHLPRKLSLRIGARPRR*KLHAANPTSKRKPKALIL 530
           H H   +PPHL R+    + A P R  LH   PT  R P AL L
Sbjct: 20  HRHHPAAPPHLLRQRRGSVAATPLRLGLHLPTPTPLRLPAALPL 63


>02_05_0167 -
           26415319-26415494,26415591-26415840,26415909-26415974,
           26416457-26416600,26416813-26416868,26416966-26417101,
           26417190-26417277,26417379-26417482,26418515-26419180,
           26419337-26419432,26419974-26420242,26420334-26420489,
           26421153-26421192
          Length = 748

 Score = 34.3 bits (75), Expect = 0.11
 Identities = 18/52 (34%), Positives = 27/52 (51%)
 Frame = -2

Query: 306 DVREITGVQLLEEAPRCPPAKRRSGLN*AWSSEEVRKVGRRVDNAKFVQLSP 151
           DV  ++GV L EE  +   A +      +W+SEE RK+ +  D   F+Q  P
Sbjct: 463 DVTAVSGVNLREEEEQLLSAPKEE----SWASEEARKIAQEEDGKLFLQKGP 510


>04_03_0660 +
           18463011-18463322,18463424-18463516,18464500-18464607,
           18464892-18465044,18465256-18465354,18465443-18465571,
           18465987-18466166,18466208-18466246,18466247-18466363,
           18466445-18466609
          Length = 464

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 14/37 (37%), Positives = 24/37 (64%)
 Frame = +1

Query: 274 KQLYSGDFPDILALLRAYRPRSINPLDEVPSKLRAVV 384
           ++L +GDF   L LL++Y P +I+ L  + +KLR  +
Sbjct: 426 RRLLAGDFTANLKLLQSYPPTNIDHLLHIANKLRGPI 462


>01_06_0360 - 28729006-28729446,28729810-28730258,28730499-28731480
          Length = 623

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = -1

Query: 700 AERPMSPYNEPNT-DFCCLXDGKRTHPFSMN 611
           AER  S  N  N  D CCL D +  HPF+ N
Sbjct: 110 AERARSVTNGRNIYDGCCLLDVQHVHPFNGN 140


>01_06_1732 -
           39531577-39531726,39531809-39531925,39532175-39532354,
           39532704-39532802,39533571-39533675,39534046-39534138,
           39534243-39534326
          Length = 275

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +1

Query: 274 KQLYSGDFPDILALLRAYRPRSINPLDEVPSKL 372
           K+L +GDF   L LL+ Y P +I+ L  V +KL
Sbjct: 242 KRLLAGDFTSNLKLLQNYPPTNISHLLYVANKL 274


>01_06_0872 +
           32609792-32610178,32611262-32611387,32611477-32611550,
           32611944-32612013,32612088-32612143,32612236-32612307,
           32612384-32612478,32612660-32612726,32612809-32612938,
           32613135-32613350,32613461-32613591,32614044-32614218,
           32614292-32614382,32614653-32614810,32615059-32615247,
           32615551-32615564,32616003-32616228
          Length = 758

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = +1

Query: 388 NGQHIFTFDGRHLTFPGNCRYVLAHDHVDRNFTLLIQLQNENPRLLF 528
           NGQH+  +D R   F G  RY   H H+ R  +    L++    L+F
Sbjct: 302 NGQHV-DYDQRPDIFRGTIRYASVHAHLGRTGSRRDDLESLAYTLIF 347


>11_04_0307 +
           16185405-16185713,16185847-16185942,16186626-16186730,
           16186938-16187090,16188395-16188478,16188566-16188694,
           16188986-16189165,16189555-16189677,16189678-16189794,
           16189889-16190053
          Length = 486

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 13/39 (33%), Positives = 24/39 (61%)
 Frame = +1

Query: 274 KQLYSGDFPDILALLRAYRPRSINPLDEVPSKLRAVVVN 390
           ++L +GDF   + LL+ Y P +I+ L  + ++LR  V +
Sbjct: 448 RRLLAGDFTANIQLLQHYPPTNIDHLLHIANRLRGSVAS 486


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,777,308
Number of Sequences: 37544
Number of extensions: 409620
Number of successful extensions: 1232
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1232
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2051430072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)