Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0249
         (766 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           25   2.6  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    25   3.4  
AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.           24   4.5  
AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.           24   4.5  
AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.           24   4.5  
AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.           24   4.5  
AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.           24   4.5  
AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    24   4.5  

>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = +1

Query: 301 DILALLRAYRPRSINPLDEV-PSKLRAVVVNGQH 399
           D+L L   YRP   NP   V  SK  AVV  G++
Sbjct: 88  DVLVLSHTYRPPENNPRWAVDASKKVAVVATGRY 121


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = +3

Query: 408 VRRSPPHLPRKLSLRIGARPRR*KLHAANPTSKRKPKALILE 533
           V+RSPPH P  L     A P   K+   N    R+ +AL L+
Sbjct: 46  VQRSPPHWPYLLCSSCSAMPAL-KILQLNVDHCREGQALALQ 86


>AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = +2

Query: 398 TSSRSTVATSPSQETVATYWRTTTSIETSRC*SNFKTKTQGS 523
           T+ R T  T     T  T W TTT+ E +   + F T T  S
Sbjct: 99  TTLRPTTTTLRPTTTTTTDWITTTTTEATTT-TTFPTTTTTS 139


>AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = +2

Query: 398 TSSRSTVATSPSQETVATYWRTTTSIETSRC*SNFKTKTQGS 523
           T+ R T  T     T  T W TTT+ E +   + F T T  S
Sbjct: 99  TTLRPTTTTLRPTTTTTTDWITTTTTEATTT-TTFPTTTTTS 139


>AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = +2

Query: 398 TSSRSTVATSPSQETVATYWRTTTSIETSRC*SNFKTKTQGS 523
           T+ R T  T     T  T W TTT+ E +   + F T T  S
Sbjct: 99  TTLRPTTTTLRPTTTTTTDWITTTTTEATTT-TTFPTTTTTS 139


>AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = +2

Query: 398 TSSRSTVATSPSQETVATYWRTTTSIETSRC*SNFKTKTQGS 523
           T+ R T  T     T  T W TTT+ E +   + F T T  S
Sbjct: 99  TTLRPTTTTLRPTTTTTTDWITTTTTEATTT-TTFPTTTTTS 139


>AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = +2

Query: 398 TSSRSTVATSPSQETVATYWRTTTSIETSRC*SNFKTKTQGS 523
           T+ R T  T     T  T W TTT+ E +   + F T T  S
Sbjct: 99  TTLRPTTTTLRPTTTTTTDWITTTTTEATTT-TTFPTTTTTS 139


>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = +2

Query: 398 TSSRSTVATSPSQETVATYWRTTTSIETSRC*SNFKTKTQGS 523
           T+ R T  T     T  T W TTT+ E +   + F T T  S
Sbjct: 99  TTLRPTTTTLRPTTTTTTDWITTTTTEATTT-TKFPTTTTTS 139


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 745,750
Number of Sequences: 2352
Number of extensions: 14781
Number of successful extensions: 45
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79418373
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)