Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0249
(766 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 31 0.68
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 31 0.68
Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical pr... 31 0.68
AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical ... 31 0.68
U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical pr... 31 1.2
AL117203-12|CAB60423.1| 487|Caenorhabditis elegans Hypothetical... 30 1.6
Z81583-7|CAB04668.1| 268|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z81540-1|CAB04402.1| 186|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z22179-14|CAI06052.1| 443|Caenorhabditis elegans Hypothetical p... 29 3.6
U21323-6|AAA62548.1| 316|Caenorhabditis elegans Hypothetical pr... 29 4.8
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 28 6.3
AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical... 28 6.3
AL132949-35|CAI70419.1| 466|Caenorhabditis elegans Hypothetical... 28 8.4
AL132949-34|CAB61101.3| 574|Caenorhabditis elegans Hypothetical... 28 8.4
AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical ... 28 8.4
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 31.5 bits (68), Expect = 0.68
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = +2
Query: 269 SSSSCTPVISL-TSWPFSEPTDLVASTH*TKCRLSSALLL*TVNTSSRSTVATSPSQETV 445
S+S+ T +S TS P + T ST T +S T SS ST+ +SPS T+
Sbjct: 299 STSTVTTAMSTSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSS-STITSSPSSTTL 357
Query: 446 ATYWRTTTSIETSRC*SNFKTKTQGSY 526
+T TTT+ E + S+ SY
Sbjct: 358 STSIPTTTTPEITSTLSSLPDNAICSY 384
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 31.5 bits (68), Expect = 0.68
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = +2
Query: 269 SSSSCTPVISL-TSWPFSEPTDLVASTH*TKCRLSSALLL*TVNTSSRSTVATSPSQETV 445
S+S+ T +S TS P + T ST T +S T SS ST+ +SPS T+
Sbjct: 299 STSTVTTAMSTSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSS-STITSSPSSTTL 357
Query: 446 ATYWRTTTSIETSRC*SNFKTKTQGSY 526
+T TTT+ E + S+ SY
Sbjct: 358 STSIPTTTTPEITSTLSSLPDNAICSY 384
>Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical protein
K03H1.5 protein.
Length = 1385
Score = 31.5 bits (68), Expect = 0.68
Identities = 18/69 (26%), Positives = 28/69 (40%)
Frame = +1
Query: 325 YRPRSINPLDEVPSKLRAVVVNGQHIFTFDGRHLTFPGNCRYVLAHDHVDRNFTLLIQLQ 504
Y R N + + + H+ T+DG T PG YVL + L++Q++
Sbjct: 837 YWRRMTNGCQDYRAPAAGYIYGEPHVITYDGIRYTMPGKGYYVLTMSDSPYH-KLMVQVR 895
Query: 505 NENPRLLFW 531
E P W
Sbjct: 896 LEQPDDTLW 904
>AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical
protein K07D4.6 protein.
Length = 389
Score = 31.5 bits (68), Expect = 0.68
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +2
Query: 275 SSCTPVISLTSWPFSEPTDLVASTH*TKCRLSSALLL*TVNT--SSRSTVATSPSQETVA 448
SS T V T +EP ST T+ +++ T T +S ST++T+ + T
Sbjct: 250 SSLTAVPGTTEETSTEPETTTTSTTTTEPTTTTSTTTQTTTTVPTSTSTISTTSTTTTTP 309
Query: 449 TYWRTTTSIETS 484
T TTTS TS
Sbjct: 310 TTTTTTTSTTTS 321
>U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical protein
F40H6.5 protein.
Length = 1288
Score = 30.7 bits (66), Expect = 1.2
Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +2
Query: 266 ASSSSCTPVISLTSWPFSEP-TDLVASTH*TKCRLSSALLL*TVNTSSRS-TVATSPSQE 439
AS+S TP +LTS + P T + T T+ S L +TSS + + TSP+
Sbjct: 920 ASTSQSTPSATLTSTTENIPSTSKIPETSTTQRPTSPILTSGATSTSSSTESTTTSPTTS 979
Query: 440 TVATYWRTTTSIETS 484
T T TTT S
Sbjct: 980 TTTTLPPTTTPYNLS 994
>AL117203-12|CAB60423.1| 487|Caenorhabditis elegans Hypothetical
protein Y48C3A.20 protein.
Length = 487
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/82 (24%), Positives = 38/82 (46%)
Frame = +1
Query: 313 LLRAYRPRSINPLDEVPSKLRAVVVNGQHIFTFDGRHLTFPGNCRYVLAHDHVDRNFTLL 492
L+ RP L VP K+R + + + ++ G+ T + + ++ + + NF+ L
Sbjct: 83 LVSRLRPDFNGTLASVPYKVRNIDGYLKKLGSYSGKRPTLSSDLQLMITFEQEESNFSDL 142
Query: 493 IQLQNENPRLLFWKIRAEYSSN 558
LQN+ P R Y++N
Sbjct: 143 QFLQNQFPNDFRVGKRGRYNNN 164
>Z81583-7|CAB04668.1| 268|Caenorhabditis elegans Hypothetical
protein T02G6.7 protein.
Length = 268
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = +1
Query: 343 NPLDEVPSKLRAVVVNG---QHIFTFDGRHLTFPGNCRYV 453
+PLD P K+ + ++N ++ TFDG F NCR++
Sbjct: 77 DPLDLFPMKMESPLINFLDFKYNITFDGEIWNFKYNCRFI 116
>Z81540-1|CAB04402.1| 186|Caenorhabditis elegans Hypothetical
protein F46B3.1 protein.
Length = 186
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Frame = +2
Query: 281 CTPVISLTSW---PFSEPTDLVASTH*TKCRLSSALLL*TVNTSSRSTVATSP 430
C P I + W P + + H TKC LS L V T + +T T+P
Sbjct: 88 CPPAICVDQWDNCPLYKLINQCTRYHKTKCPLSCGLCTGNVTTPATTTSTTTP 140
>Z22179-14|CAI06052.1| 443|Caenorhabditis elegans Hypothetical
protein F58A4.14 protein.
Length = 443
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +1
Query: 418 RHLTFPGNCRYVLA-HDHVDRNFTLLIQLQNENPRLLFWKIRAEYSSN*KKMDRLFFN 588
R+ G C ++L H T ++ +NP++ +W RA Y +K+ FN
Sbjct: 124 RYFYETGRCNFLLGRHQIAVEQLTKASEVMKDNPKVWYWLARAIYHFPAEKVQGKTFN 181
>U21323-6|AAA62548.1| 316|Caenorhabditis elegans Hypothetical
protein C45G9.5 protein.
Length = 316
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +3
Query: 504 KRKPKALILEDKSGVFIXLKENGQAIL*RSFXRISRFIEKG 626
K+ IL DKSG F K+NG+ + R+ RI F+ +G
Sbjct: 223 KKYGDGFILNDKSGRFSEFKKNGEFVAIRA--RIDAFLGEG 261
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 28.3 bits (60), Expect = 6.3
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = +2
Query: 263 GASSSSCTPVISLTSWPFSEPTDLVASTH*TKCRLSSALLL*TVNT--SSRSTVATSPSQ 436
G+S +S +PV S TS S PT+ ST + LSS + T +T S S+ +TSPS
Sbjct: 1405 GSSKASSSPVPSQTS---STPTNPTGSTE-SSTLLSSTISGSTQHTTMSKASSGSTSPST 1460
Query: 437 ETVATYWRTTTSIETSRC*SNFKTKTQ 517
+ T S TS ++ + TQ
Sbjct: 1461 NSQTGSTVTMGSSSTSGVSTSSASSTQ 1487
>AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical
protein Y43F8C.16 protein.
Length = 370
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/71 (25%), Positives = 36/71 (50%)
Frame = +2
Query: 272 SSSCTPVISLTSWPFSEPTDLVASTH*TKCRLSSALLL*TVNTSSRSTVATSPSQETVAT 451
S++ T S+T+ S P+ + ++T S+ + + +S T +T+P+ + +T
Sbjct: 146 SATSTSTTSITTSTLSPPSTVQSTTTAKPTTTSTITPTTSADPTSTITTSTTPNPSSPST 205
Query: 452 YWRTTTSIETS 484
TTT+ TS
Sbjct: 206 VQSTTTAEPTS 216
>AL132949-35|CAI70419.1| 466|Caenorhabditis elegans Hypothetical
protein Y53F4B.27b protein.
Length = 466
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
Frame = -1
Query: 655 CCLXDGKRTHPFSMNRE---ILWKLR*RIACPFS 563
CCL +G+ T PFS E ILW+ + CP +
Sbjct: 389 CCLANGQLTCPFSTPHEQTGILWQFS-KFECPIN 421
>AL132949-34|CAB61101.3| 574|Caenorhabditis elegans Hypothetical
protein Y53F4B.27a protein.
Length = 574
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
Frame = -1
Query: 655 CCLXDGKRTHPFSMNRE---ILWKLR*RIACPFS 563
CCL +G+ T PFS E ILW+ + CP +
Sbjct: 497 CCLANGQLTCPFSTPHEQTGILWQFS-KFECPIN 529
>AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical
protein Y51B11A.1 protein.
Length = 1079
Score = 27.9 bits (59), Expect = 8.4
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = +2
Query: 266 ASSSSCTPVISLTSWPFSEPTDLVASTH*TKCRLSSALLL*TVNTSSRSTVAT-SPSQET 442
A ++ T S ++ P T T T+ SS + T T++ T +T SPS T
Sbjct: 195 APETTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTTTAPETTSTESPSSST 254
Query: 443 VATYWRTTTSIETS 484
TTT+ ET+
Sbjct: 255 TPVQTTTTTAPETT 268
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,775,078
Number of Sequences: 27780
Number of extensions: 347419
Number of successful extensions: 1109
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1103
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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