Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0248
(736 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 100 4e-20
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 90 5e-17
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 90 6e-17
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 89 8e-17
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 87 3e-16
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 87 6e-16
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 86 7e-16
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 86 1e-15
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 84 3e-15
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 84 3e-15
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 84 3e-15
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 81 2e-14
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 81 4e-14
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 79 1e-13
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 79 1e-13
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 78 2e-13
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 78 2e-13
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 77 3e-13
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 77 5e-13
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 77 6e-13
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 75 2e-12
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 75 2e-12
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 75 2e-12
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 74 4e-12
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 74 4e-12
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 74 4e-12
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 69 1e-10
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 68 3e-10
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 67 5e-10
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 67 5e-10
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 66 6e-10
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 66 6e-10
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 66 8e-10
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 66 8e-10
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 64 3e-09
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 64 4e-09
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 62 1e-08
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 61 3e-08
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 60 4e-08
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 60 7e-08
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 60 7e-08
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 59 1e-07
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 58 3e-07
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 58 3e-07
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 56 7e-07
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 56 7e-07
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 56 9e-07
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 56 9e-07
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 56 1e-06
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 54 3e-06
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 54 4e-06
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 53 8e-06
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 52 1e-05
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 52 1e-05
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 51 3e-05
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 51 3e-05
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 51 3e-05
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 50 4e-05
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 50 4e-05
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 50 6e-05
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 50 8e-05
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 49 1e-04
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 49 1e-04
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 48 2e-04
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 48 2e-04
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 48 2e-04
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 48 2e-04
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 48 2e-04
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 47 4e-04
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 47 6e-04
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 46 0.001
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 46 0.001
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 46 0.001
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 45 0.002
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 45 0.002
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 44 0.004
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 43 0.007
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 43 0.009
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 43 0.009
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 43 0.009
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 42 0.012
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 42 0.012
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 42 0.016
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 42 0.021
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 42 0.021
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 41 0.027
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 41 0.027
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 41 0.027
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 38 0.19
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 38 0.19
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 38 0.34
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 37 0.45
UniRef50_Q5ABE2 Cluster: Putative uncharacterized protein CLN3; ... 36 1.0
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 35 1.8
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 34 4.2
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 100 bits (239), Expect = 4e-20
Identities = 54/93 (58%), Positives = 61/93 (65%)
Frame = -2
Query: 282 KGGG*ESKSLLFIRGNAISGAPSIRGTNQFPNPPXXXXXXXXXXXXKACAVTIVL*I*SS 103
K GG +LFIRGNA+SGAP++ GTNQFPNPP KA AVT+ L I S
Sbjct: 126 KEGGSNQNLMLFIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMTL-IWSF 184
Query: 102 PINDPGFPNSARIKSLKDVPIIPDQIPKIKYNV 4
PI PG PNSARIKSL DVP +P PK+KYNV
Sbjct: 185 PIKLPGCPNSARIKSLSDVPTMPAHAPKMKYNV 217
Score = 73.3 bits (172), Expect = 6e-12
Identities = 34/56 (60%), Positives = 40/56 (71%)
Frame = -3
Query: 425 DEIPAKCSEKIARSTDLPLCAILDESGG*TVHPVPAPFSTILLEINNIREGGRSQN 258
+E PAKC+EKI STD P CAI SGG TVHPVP P STI L + ++EGG +QN
Sbjct: 78 EETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIPLNKSKVKEGGSNQN 133
Score = 70.1 bits (164), Expect = 5e-11
Identities = 33/48 (68%), Positives = 40/48 (83%)
Frame = -1
Query: 658 NKCGYKMGSPPPAGSKNDVFKFRSVNNIVIAPAKTGSDNNNKNAVXPT 515
NKC + +GSPPPAGSK +VFKFRSV +IVIAPA TGS++N+K AV T
Sbjct: 1 NKC-WSIGSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNT 47
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 90.2 bits (214), Expect = 5e-17
Identities = 43/65 (66%), Positives = 45/65 (69%)
Frame = +3
Query: 525 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLFWIFGTS*SLYFNLPG 704
TAF AGAIT+LLTDRN NT+FFDPAGGGDPILY HLFW FG LPG
Sbjct: 194 TAFLLLLSLPVLAGAITMLLTDRNFNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPG 253
Query: 705 FGIIS 719
FGIIS
Sbjct: 254 FGIIS 258
Score = 62.1 bits (144), Expect = 1e-08
Identities = 32/68 (47%), Positives = 40/68 (58%)
Frame = +1
Query: 304 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 483
+VE G+GTG TVYPPLS +H G +VDLAIFSLHL+G+SS
Sbjct: 120 LVEVGSGTGWTVYPPLSGITSHSGGAVDLAIFSLHLSGVSSILGSINFITTIFNMRGPGM 179
Query: 484 SFDQLPLF 507
+ +LPLF
Sbjct: 180 TMHRLPLF 187
Score = 60.5 bits (140), Expect = 4e-08
Identities = 34/96 (35%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
Frame = +2
Query: 2 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXX 175
GTLY EL PG I G+ Q+YN ++TAHA
Sbjct: 17 GTLYFIFGAIAGVMGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFFMVMPA 76
Query: 176 XXXXXXN*LVPLILGAPDIAFPRINNKDFDSYPPPL 283
N VP+++GAPD+AFPR+NN F PP L
Sbjct: 77 MIGGFGNWFVPILIGAPDMAFPRLNNISFWLLPPSL 112
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 89.8 bits (213), Expect = 6e-17
Identities = 59/131 (45%), Positives = 60/131 (45%)
Frame = +1
Query: 304 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 483
IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAGISS
Sbjct: 90 IVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRINKM 149
Query: 484 SFDQLPLFDEL*GXXXXXXXXXXXXXXXXXXXX*QIET*IHHFLILLEEETPFYIHIYFG 663
SFDQ+PLF G F P F
Sbjct: 150 SFDQMPLFIWAVGITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFW 209
Query: 664 FLGHPEVYILI 696
F GHPEVYILI
Sbjct: 210 FFGHPEVYILI 220
Score = 85.0 bits (201), Expect = 2e-15
Identities = 39/53 (73%), Positives = 40/53 (75%)
Frame = +3
Query: 513 AVGXTAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLFWIFG 671
AVG TA AGAIT+LLTDRNLNTSFFDPAGGGDPILY HLFW FG
Sbjct: 160 AVGITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFG 212
Score = 83.0 bits (196), Expect = 7e-15
Identities = 41/70 (58%), Positives = 45/70 (64%)
Frame = +2
Query: 74 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 253
ELG PGSLIGDDQIYNTIVTAHA N L+PL+LGAPD+AFPR+NN
Sbjct: 13 ELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDMAFPRMNN 72
Query: 254 KDFDSYPPPL 283
F PP L
Sbjct: 73 MSFWLLPPSL 82
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 89.4 bits (212), Expect = 8e-17
Identities = 44/73 (60%), Positives = 48/73 (65%)
Frame = +3
Query: 513 AVGXTAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLFWIFGTS*SLYF 692
+V TA AGAIT+LLTDRN+NTSFFDP+GGGDPILY HLFW FG
Sbjct: 171 SVFITAILLLLSLPVLAGAITMLLTDRNMNTSFFDPSGGGDPILYQHLFWFFGHPEVYIL 230
Query: 693 NLPGFGIISPNYF 731
LPGFGIIS F
Sbjct: 231 ILPGFGIISHMIF 243
Score = 70.9 bits (166), Expect = 3e-11
Identities = 33/63 (52%), Positives = 42/63 (66%)
Frame = +2
Query: 74 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 253
ELG PGSLIG+DQIYN+IVT+HA N L+PL+LG+PD++FPR+NN
Sbjct: 24 ELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDMSFPRMNN 83
Query: 254 KDF 262
F
Sbjct: 84 MSF 86
Score = 56.8 bits (131), Expect = 5e-07
Identities = 43/127 (33%), Positives = 47/127 (37%)
Frame = +1
Query: 316 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ 495
G GTG TVYPPLS + H G SVDL IFSLHLAG SS + D+
Sbjct: 105 GVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAGASSIMGAVNFITTILNMRSNLFNMDK 164
Query: 496 LPLFDEL*GXXXXXXXXXXXXXXXXXXXX*QIET*IHHFLILLEEETPFYIHIYFGFLGH 675
+ LF F P F F GH
Sbjct: 165 MSLFSWSVFITAILLLLSLPVLAGAITMLLTDRNMNTSFFDPSGGGDPILYQHLFWFFGH 224
Query: 676 PEVYILI 696
PEVYILI
Sbjct: 225 PEVYILI 231
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 87.4 bits (207), Expect = 3e-16
Identities = 40/53 (75%), Positives = 41/53 (77%)
Frame = +3
Query: 513 AVGXTAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLFWIFG 671
AVG TAF AGAIT+LLTDRNLNTSFFDPAGGGDPILY HLFW FG
Sbjct: 184 AVGITAFLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFG 236
Score = 86.2 bits (204), Expect = 7e-16
Identities = 47/94 (50%), Positives = 50/94 (53%)
Frame = +2
Query: 2 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXX 181
GTLY AELG PGSLIGDDQIYNTIVTAHA
Sbjct: 13 GTLYFIFGIWAGMVGTSLSLLIRAELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMI 72
Query: 182 XXXXN*LVPLILGAPDIAFPRINNKDFDSYPPPL 283
N LVPL+LGAPD+AFPR+NN F PP L
Sbjct: 73 GGFGNWLVPLMLGAPDMAFPRMNNMSFWLLPPSL 106
Score = 86.2 bits (204), Expect = 7e-16
Identities = 45/68 (66%), Positives = 46/68 (67%)
Frame = +1
Query: 304 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 483
IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAGISS
Sbjct: 114 IVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRMNNL 173
Query: 484 SFDQLPLF 507
SFDQ+PLF
Sbjct: 174 SFDQMPLF 181
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 86.6 bits (205), Expect = 6e-16
Identities = 40/69 (57%), Positives = 46/69 (66%)
Frame = +3
Query: 513 AVGXTAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLFWIFGTS*SLYF 692
A+ TA AGAIT+LLTDRN NTSF+DPAGGGDPILY HLFW FG
Sbjct: 187 AIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLFWFFGHPEVYIL 246
Query: 693 NLPGFGIIS 719
+PGFG++S
Sbjct: 247 IIPGFGMVS 255
Score = 64.5 bits (150), Expect = 3e-09
Identities = 35/67 (52%), Positives = 39/67 (58%)
Frame = +1
Query: 307 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 486
VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS +
Sbjct: 118 VEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMT 177
Query: 487 FDQLPLF 507
+LPLF
Sbjct: 178 LHKLPLF 184
Score = 62.1 bits (144), Expect = 1e-08
Identities = 37/96 (38%), Positives = 44/96 (45%), Gaps = 2/96 (2%)
Frame = +2
Query: 2 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXX 175
GTLY EL PG L GD Q+YN I+TAHA
Sbjct: 14 GTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPA 73
Query: 176 XXXXXXN*LVPLILGAPDIAFPRINNKDFDSYPPPL 283
N LVP+++GAPD+AFPR+NN F PP L
Sbjct: 74 MVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 86.2 bits (204), Expect = 7e-16
Identities = 43/69 (62%), Positives = 45/69 (65%)
Frame = +3
Query: 513 AVGXTAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLFWIFGTS*SLYF 692
AV TA A IT+LLTDRNLNT+FFDPAGGGDPILY HLFW FG
Sbjct: 187 AVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYIL 246
Query: 693 NLPGFGIIS 719
LPGFGIIS
Sbjct: 247 ILPGFGIIS 255
Score = 77.8 bits (183), Expect = 3e-13
Identities = 41/92 (44%), Positives = 47/92 (51%)
Frame = +2
Query: 2 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXX 181
GTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 16 GTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPILI 75
Query: 182 XXXXN*LVPLILGAPDIAFPRINNKDFDSYPP 277
N LVPL++GAPD+AFPR+NN F PP
Sbjct: 76 GGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPP 107
Score = 67.7 bits (158), Expect = 3e-10
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = +1
Query: 307 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 426
VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG+SS
Sbjct: 118 VEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSS 157
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 85.8 bits (203), Expect = 1e-15
Identities = 41/65 (63%), Positives = 44/65 (67%)
Frame = +3
Query: 525 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLFWIFGTS*SLYFNLPG 704
TAF AGAIT+LLTDRN NTSFFD +GGGDPILY HLFW FG LPG
Sbjct: 199 TAFLLLLAVPVLAGAITMLLTDRNFNTSFFDASGGGDPILYQHLFWFFGHPEVYILILPG 258
Query: 705 FGIIS 719
FG+IS
Sbjct: 259 FGMIS 263
Score = 60.9 bits (141), Expect = 3e-08
Identities = 34/96 (35%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Frame = +2
Query: 2 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXX 175
GTLY EL P + L+G+ QIYN ++TAHA
Sbjct: 22 GTLYLIFGAFSGVLGGCMSMLIRMELAQPSNHLLLGNHQIYNVLITAHAFLMIFFMVMPV 81
Query: 176 XXXXXXN*LVPLILGAPDIAFPRINNKDFDSYPPPL 283
N LVP+++G+PD+AFPR+NN F PP L
Sbjct: 82 MIGGFGNWLVPIMIGSPDMAFPRLNNISFWLLPPSL 117
Score = 59.7 bits (138), Expect = 7e-08
Identities = 32/68 (47%), Positives = 39/68 (57%)
Frame = +1
Query: 304 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 483
+VE G GTG TVYPPLSS +H G +VDLAIFSLH++G SS
Sbjct: 125 LVEVGVGTGWTVYPPLSSIQSHSGGAVDLAIFSLHISGASSILGAVNFISTILNMRSPGQ 184
Query: 484 SFDQLPLF 507
S ++PLF
Sbjct: 185 SMYRIPLF 192
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 84.2 bits (199), Expect = 3e-15
Identities = 38/53 (71%), Positives = 41/53 (77%)
Frame = +3
Query: 561 AGAITILLTDRNLNTSFFDPAGGGDPILYPHLFWIFGTS*SLYFNLPGFGIIS 719
A IT+LLTDRNLNT+FFDPAGGGDPILY HLFW FG LPGFG+IS
Sbjct: 204 AAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMIS 256
Score = 80.2 bits (189), Expect = 5e-14
Identities = 42/92 (45%), Positives = 48/92 (52%)
Frame = +2
Query: 2 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXX 181
GTLY AELG PG+L+GDDQIYN IVTAHA
Sbjct: 17 GTLYLIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMI 76
Query: 182 XXXXN*LVPLILGAPDIAFPRINNKDFDSYPP 277
N LVPL++GAPD+AFPR+NN F PP
Sbjct: 77 GGFGNWLVPLMIGAPDMAFPRMNNMSFWLXPP 108
Score = 69.7 bits (163), Expect = 7e-11
Identities = 33/40 (82%), Positives = 35/40 (87%)
Frame = +1
Query: 307 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 426
VE GAGTG TVYPPL+ N+AH G SVDLAIFSLHLAGISS
Sbjct: 119 VEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGISS 158
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 84.2 bits (199), Expect = 3e-15
Identities = 38/53 (71%), Positives = 41/53 (77%)
Frame = +3
Query: 561 AGAITILLTDRNLNTSFFDPAGGGDPILYPHLFWIFGTS*SLYFNLPGFGIIS 719
A IT+LLTDRNLNT+FFDPAGGGDPILY HLFW FG LPGFG+IS
Sbjct: 203 AAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMIS 255
Score = 77.8 bits (183), Expect = 3e-13
Identities = 41/92 (44%), Positives = 47/92 (51%)
Frame = +2
Query: 2 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXX 181
GTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 16 GTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPVMI 75
Query: 182 XXXXN*LVPLILGAPDIAFPRINNKDFDSYPP 277
N LVPL++GAPD+AFPR+NN F PP
Sbjct: 76 GGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPP 107
Score = 67.7 bits (158), Expect = 3e-10
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = +1
Query: 307 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 426
VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG+SS
Sbjct: 118 VEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSS 157
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 84.2 bits (199), Expect = 3e-15
Identities = 38/53 (71%), Positives = 41/53 (77%)
Frame = +3
Query: 561 AGAITILLTDRNLNTSFFDPAGGGDPILYPHLFWIFGTS*SLYFNLPGFGIIS 719
A IT+LLTDRNLNT+FFDPAGGGDPILY HLFW FG LPGFG+IS
Sbjct: 203 AAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMIS 255
Score = 77.4 bits (182), Expect = 3e-13
Identities = 41/94 (43%), Positives = 48/94 (51%)
Frame = +2
Query: 2 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXX 181
GTLY AELG PG+L+G+D IYN IVTAHA
Sbjct: 16 GTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMI 75
Query: 182 XXXXN*LVPLILGAPDIAFPRINNKDFDSYPPPL 283
N LVPL++GAPD+AFPR+NN F PP L
Sbjct: 76 GGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSL 109
Score = 65.3 bits (152), Expect = 1e-09
Identities = 30/41 (73%), Positives = 34/41 (82%)
Frame = +1
Query: 304 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 426
+VE GAGTG TVYPPL+ N +H G SVDL IFSLHLAG+SS
Sbjct: 117 MVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSS 157
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 81.4 bits (192), Expect = 2e-14
Identities = 40/69 (57%), Positives = 44/69 (63%)
Frame = +3
Query: 513 AVGXTAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLFWIFGTS*SLYF 692
AV TA AG IT++LTDRN NTSFF+ AGGGDPILY HLFW FG
Sbjct: 188 AVVITAVLLLLSLPVLAGGITMVLTDRNFNTSFFEVAGGGDPILYQHLFWFFGHPEVYIL 247
Query: 693 NLPGFGIIS 719
+PGFGIIS
Sbjct: 248 IIPGFGIIS 256
Score = 60.9 bits (141), Expect = 3e-08
Identities = 28/40 (70%), Positives = 32/40 (80%)
Frame = +1
Query: 307 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 426
+ENG GTG T+YPPLS +H G SVDLAIF LHL+GISS
Sbjct: 119 IENGVGTGWTLYPPLSGIQSHSGPSVDLAIFGLHLSGISS 158
Score = 53.6 bits (123), Expect = 5e-06
Identities = 27/61 (44%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +2
Query: 74 ELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 250
EL PG I D+Q+YN+I+TAHA N L+PL LG PD+ FPR+N
Sbjct: 40 ELSGPGVQYIADNQLYNSIITAHAIIMIFFMVMPALIGGFGNFLLPLGLGGPDMGFPRLN 99
Query: 251 N 253
N
Sbjct: 100 N 100
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 80.6 bits (190), Expect = 4e-14
Identities = 38/69 (55%), Positives = 45/69 (65%)
Frame = +3
Query: 513 AVGXTAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLFWIFGTS*SLYF 692
+V TA+ AGAIT+LLTDRN T+FFDPAGGGDPIL+ H+FW FG
Sbjct: 293 SVFVTAWLLLLSLPVLAGAITMLLTDRNFGTTFFDPAGGGDPILFQHIFWFFGHPEVYIV 352
Query: 693 NLPGFGIIS 719
LP FG+IS
Sbjct: 353 ILPAFGVIS 361
Score = 46.4 bits (105), Expect = 7e-04
Identities = 19/41 (46%), Positives = 29/41 (70%)
Frame = +1
Query: 304 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 426
+++ GAG G T YPP+S+ R+VD AIF++H++G SS
Sbjct: 223 MIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSGASS 263
Score = 43.6 bits (98), Expect = 0.005
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +2
Query: 71 AELGNPGSLIG--DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 244
A LG L G D ++N ++T H N +PL++GAPD+AFPR
Sbjct: 143 ALLGTMDQLDGNPDGHLWNVLITGHGVLMMFFVVIPALFGGFGNYFMPLMIGAPDMAFPR 202
Query: 245 INNKDFDSY 271
+NN + Y
Sbjct: 203 LNNLSYWMY 211
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 79.0 bits (186), Expect = 1e-13
Identities = 36/69 (52%), Positives = 43/69 (62%)
Frame = +3
Query: 513 AVGXTAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLFWIFGTS*SLYF 692
+V T+F A AIT+LL DRN NTSF+DP GGGD +LY HLFW FG
Sbjct: 191 SVAVTSFLVIVAIPVLAAAITLLLFDRNFNTSFYDPVGGGDVVLYQHLFWFFGHPEVYIL 250
Query: 693 NLPGFGIIS 719
LPGFG++S
Sbjct: 251 ILPGFGLVS 259
Score = 56.0 bits (129), Expect = 9e-07
Identities = 27/39 (69%), Positives = 28/39 (71%)
Frame = +1
Query: 310 ENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 426
E G GTG TVYPPLSS +H G SVDL IFS HL GI S
Sbjct: 123 EGGPGTGWTVYPPLSSLQSHSGASVDLMIFSFHLVGIGS 161
Score = 46.8 bits (106), Expect = 6e-04
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +2
Query: 74 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 247
EL PG L G+ YN I T H N VP+++GAPD++FPR+
Sbjct: 42 ELAFPGDQILFGEYHFYNMITTVHGVLMLFVVVMPILFGGFGNYFVPILIGAPDMSFPRL 101
Query: 248 NNKDF 262
NN F
Sbjct: 102 NNFSF 106
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 78.6 bits (185), Expect = 1e-13
Identities = 40/69 (57%), Positives = 44/69 (63%)
Frame = +3
Query: 513 AVGXTAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLFWIFGTS*SLYF 692
AV TA A AIT+LLTDRNLNTSF++ AGGGD ILY HLFW FG
Sbjct: 214 AVVITAVLLLLSLPVLAAAITMLLTDRNLNTSFYELAGGGDAILYQHLFWFFGHPEVYIL 273
Query: 693 NLPGFGIIS 719
+PGFGIIS
Sbjct: 274 IIPGFGIIS 282
Score = 57.2 bits (132), Expect = 4e-07
Identities = 26/41 (63%), Positives = 30/41 (73%)
Frame = +1
Query: 304 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 426
I+ENG GTG T+YPPLS +H VDL IF LHL+GISS
Sbjct: 144 IIENGVGTGWTLYPPLSGIQSHSSMGVDLGIFGLHLSGISS 184
Score = 54.0 bits (124), Expect = 4e-06
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +2
Query: 74 ELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 250
EL PG I D+Q+YN+I+T+H N L+P+++G PD+AFPR+N
Sbjct: 66 ELSGPGIQYIEDNQLYNSIITSHGVIMIFFMVMPALIGGFGNFLLPILIGGPDMAFPRLN 125
Query: 251 NKDFDSYPPPLY 286
N + P L+
Sbjct: 126 NVSYWLLIPSLF 137
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 78.2 bits (184), Expect = 2e-13
Identities = 38/65 (58%), Positives = 41/65 (63%)
Frame = +3
Query: 525 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLFWIFGTS*SLYFNLPG 704
TAF A AIT+LLTDRN T+F+D AGGGDP LY HLFW FG LPG
Sbjct: 234 TAFLLLLALPVLAAAITMLLTDRNFGTTFYDAAGGGDPELYQHLFWFFGHPEVYIMILPG 293
Query: 705 FGIIS 719
FGIIS
Sbjct: 294 FGIIS 298
Score = 48.0 bits (109), Expect = 2e-04
Identities = 27/65 (41%), Positives = 35/65 (53%)
Frame = +1
Query: 313 NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFD 492
NGAGTG TVY PLS++ G +VD+AI SLH+AG SS +
Sbjct: 164 NGAGTGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASSILGAINFITTILNMRAPGMTLH 222
Query: 493 QLPLF 507
++PLF
Sbjct: 223 KMPLF 227
Score = 42.3 bits (95), Expect = 0.012
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +2
Query: 113 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNKDF 262
++N ++TAH N VP+++GAPD+AFPR+NN F
Sbjct: 93 LWNVLITAHGLIMVFFMVMPAMIGGFGNWFVPIMIGAPDMAFPRMNNISF 142
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 78.2 bits (184), Expect = 2e-13
Identities = 36/53 (67%), Positives = 38/53 (71%)
Frame = +3
Query: 513 AVGXTAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLFWIFG 671
AV TA AGAIT+LLTDRN+NTSFFDPAGGGDPILY HLFW G
Sbjct: 106 AVEITAILLLLSLPVLAGAITMLLTDRNINTSFFDPAGGGDPILYQHLFWFXG 158
Score = 66.5 bits (155), Expect = 6e-10
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = +1
Query: 307 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 426
VE GAGTG TV PPLS+NIAH G SVDLAIFSLH+AG+ S
Sbjct: 37 VEKGAGTGWTVSPPLSANIAHEGSSVDLAIFSLHMAGVXS 76
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 77.4 bits (182), Expect = 3e-13
Identities = 40/92 (43%), Positives = 47/92 (51%)
Frame = +2
Query: 2 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXX 181
GTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 5 GTLYLIFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMI 64
Query: 182 XXXXN*LVPLILGAPDIAFPRINNKDFDSYPP 277
N L+PL++GAPD+AFPR+NN F PP
Sbjct: 65 GGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPP 96
Score = 67.7 bits (158), Expect = 3e-10
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = +1
Query: 307 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 426
+E GAGTG TVYPPL+ N+AH G SVDL IFSLHLAGISS
Sbjct: 107 IEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISS 146
Score = 39.1 bits (87), Expect = 0.11
Identities = 20/36 (55%), Positives = 22/36 (61%)
Frame = +3
Query: 513 AVGXTAFXXXXXXXXXAGAITILLTDRNLNTSFFDP 620
AV TA A IT+LLTDRNLNT+FFDP
Sbjct: 176 AVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP 211
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 77.0 bits (181), Expect = 5e-13
Identities = 37/70 (52%), Positives = 43/70 (61%)
Frame = +2
Query: 74 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 253
ELG PGS IG+DQ+YN +VTAHA N LVPL+LGAPD+AFPR+NN
Sbjct: 23 ELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDMAFPRLNN 82
Query: 254 KDFDSYPPPL 283
F PP L
Sbjct: 83 MSFWFLPPSL 92
Score = 74.1 bits (174), Expect = 3e-12
Identities = 34/50 (68%), Positives = 36/50 (72%)
Frame = +3
Query: 513 AVGXTAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLFW 662
+V TA AGAIT+LLTDRN NTSFFDPAGGGDPILY HLFW
Sbjct: 170 SVKITAILLLLSLPVLAGAITMLLTDRNFNTSFFDPAGGGDPILYQHLFW 219
Score = 70.1 bits (164), Expect = 5e-11
Identities = 33/40 (82%), Positives = 35/40 (87%)
Frame = +1
Query: 307 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 426
VE+GAGTG TVYPPLS N AH G SVDLAIFSLHLAG+SS
Sbjct: 101 VESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAGVSS 140
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 76.6 bits (180), Expect = 6e-13
Identities = 36/65 (55%), Positives = 41/65 (63%)
Frame = +3
Query: 525 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLFWIFGTS*SLYFNLPG 704
TAF + IT+LL DRN NTSFF+ +GGGDPILY HLFW FG +PG
Sbjct: 192 TAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGHPEVYILIIPG 251
Query: 705 FGIIS 719
FGIIS
Sbjct: 252 FGIIS 256
Score = 64.9 bits (151), Expect = 2e-09
Identities = 48/131 (36%), Positives = 54/131 (41%)
Frame = +1
Query: 304 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 483
+VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL ISS
Sbjct: 118 LVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGM 177
Query: 484 SFDQLPLFDEL*GXXXXXXXXXXXXXXXXXXXX*QIET*IHHFLILLEEETPFYIHIYFG 663
+ +LPLF F + P F
Sbjct: 178 TMHKLPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFW 237
Query: 664 FLGHPEVYILI 696
F GHPEVYILI
Sbjct: 238 FFGHPEVYILI 248
Score = 48.4 bits (110), Expect = 2e-04
Identities = 27/65 (41%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +2
Query: 74 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 247
EL PGS L G+ Q++N +V HA N L+PL++GA D AFPRI
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGATDTAFPRI 98
Query: 248 NNKDF 262
NN F
Sbjct: 99 NNIAF 103
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 74.9 bits (176), Expect = 2e-12
Identities = 35/72 (48%), Positives = 43/72 (59%)
Frame = +2
Query: 74 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 253
ELG PGSL+ DDQ+YN +VTAH N LVPL+LGAPD+AFPR+NN
Sbjct: 24 ELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNN 83
Query: 254 KDFDSYPPPLYY 289
F +P +Y
Sbjct: 84 MSFGFFPLHWHY 95
Score = 33.1 bits (72), Expect = 7.3
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +1
Query: 373 GRSVDLAIFSLHLAGISS 426
G SVDLAIF LHLAG+SS
Sbjct: 122 GPSVDLAIFPLHLAGVSS 139
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 74.9 bits (176), Expect = 2e-12
Identities = 35/69 (50%), Positives = 41/69 (59%)
Frame = +3
Query: 513 AVGXTAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLFWIFGTS*SLYF 692
A+ TAF + IT+LL DRN NTSFF+ AGGGDPI Y H FW FG
Sbjct: 188 AIFITAFLLLLSLPVLSAGITMLLMDRNFNTSFFEVAGGGDPIFYQHAFWFFGHPEVYIL 247
Query: 693 NLPGFGIIS 719
+PGFGI+S
Sbjct: 248 IIPGFGIVS 256
Score = 69.3 bits (162), Expect = 9e-11
Identities = 49/131 (37%), Positives = 55/131 (41%)
Frame = +1
Query: 304 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 483
+VE+GAGTG TVYPPLSS AH G SVDLAIFSLHL ISS
Sbjct: 118 LVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFSLHLTSISSLLGAINFIVTTLNMRTNGM 177
Query: 484 SFDQLPLFDEL*GXXXXXXXXXXXXXXXXXXXX*QIET*IHHFLILLEEETPFYIHIYFG 663
S ++PLF F + P + F
Sbjct: 178 SMHKMPLFVWAIFITAFLLLLSLPVLSAGITMLLMDRNFNTSFFEVAGGGDPIFYQHAFW 237
Query: 664 FLGHPEVYILI 696
F GHPEVYILI
Sbjct: 238 FFGHPEVYILI 248
Score = 45.6 bits (103), Expect = 0.001
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +2
Query: 74 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 247
EL PGS L G+ Q++N +V HA N ++PL++GA D++FPRI
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLAMPALIGGFGNYMLPLMIGATDMSFPRI 98
Query: 248 NNKDF 262
N+ F
Sbjct: 99 NSIGF 103
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 74.5 bits (175), Expect = 2e-12
Identities = 33/50 (66%), Positives = 38/50 (76%)
Frame = +3
Query: 570 ITILLTDRNLNTSFFDPAGGGDPILYPHLFWIFGTS*SLYFNLPGFGIIS 719
IT++LTDRN NTSFF+ AGGGDPIL+ HLFW FG +PGFGIIS
Sbjct: 232 ITMVLTDRNFNTSFFEVAGGGDPILFQHLFWFFGHPEVYILIIPGFGIIS 281
Score = 60.9 bits (141), Expect = 3e-08
Identities = 34/95 (35%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Frame = +2
Query: 2 GTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXX 178
GTLY EL PG I ++Q+YN+I+TAHA
Sbjct: 44 GTLYLIFALFSGLLGTAFSVLIRLELSGPGVQFIANNQLYNSIITAHAILMIFFMVMPAL 103
Query: 179 XXXXXN*LVPLILGAPDIAFPRINNKDFDSYPPPL 283
N L+PL++G PD+AFPR+NN F PP L
Sbjct: 104 IGGFGNFLMPLMIGGPDMAFPRLNNISFWLLPPSL 138
Score = 55.2 bits (127), Expect = 2e-06
Identities = 45/135 (33%), Positives = 53/135 (39%), Gaps = 4/135 (2%)
Frame = +1
Query: 304 IVENGAGTG*TV----YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXX 471
I+E G GTG T+ YPPLS +H G SVDLAIF+LHL+G+SS
Sbjct: 146 IIEGGVGTGWTLLKDKYPPLSGLQSHSGPSVDLAIFALHLSGVSSLLGSINFITTVANMR 205
Query: 472 XXXXSFDQLPLFDEL*GXXXXXXXXXXXXXXXXXXXX*QIET*IHHFLILLEEETPFYIH 651
+L LF G T F + P
Sbjct: 206 TPGIKLHKLALF----GWATWSSRSRYFLGITMVLTDRNFNT---SFFEVAGGGDPILFQ 258
Query: 652 IYFGFLGHPEVYILI 696
F F GHPEVYILI
Sbjct: 259 HLFWFFGHPEVYILI 273
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 73.7 bits (173), Expect = 4e-12
Identities = 38/69 (55%), Positives = 44/69 (63%)
Frame = +2
Query: 71 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 250
AELG PG+L+GDDQ N IVTAHA N LVPL++GAPD+AFPR+N
Sbjct: 40 AELGQPGTLLGDDQXXNVIVTAHAFVMIFXMXMPIMIGGFGNWLVPLMIGAPDMAFPRMN 99
Query: 251 NKDFDSYPP 277
N F PP
Sbjct: 100 NMSFWLLPP 108
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 73.7 bits (173), Expect = 4e-12
Identities = 32/53 (60%), Positives = 38/53 (71%)
Frame = +3
Query: 561 AGAITILLTDRNLNTSFFDPAGGGDPILYPHLFWIFGTS*SLYFNLPGFGIIS 719
A IT+LL DRN T+FF+P+GGGDPIL+ HLFW FG LPGFGI+S
Sbjct: 293 ASGITMLLFDRNFGTAFFEPSGGGDPILFQHLFWFFGHPEVYVLILPGFGIVS 345
Score = 39.1 bits (87), Expect = 0.11
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = +1
Query: 316 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 426
G G G T+YPPLS G VD +FSLHLAG+SS
Sbjct: 217 GCGIGWTLYPPLSI-WEGSGFGVDYLMFSLHLAGVSS 252
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 73.7 bits (173), Expect = 4e-12
Identities = 31/37 (83%), Positives = 33/37 (89%)
Frame = +3
Query: 561 AGAITILLTDRNLNTSFFDPAGGGDPILYPHLFWIFG 671
AGAIT+LLTDR NT+FFDPAGGGDPILY HLFW FG
Sbjct: 204 AGAITMLLTDRYFNTTFFDPAGGGDPILYQHLFWFFG 240
Score = 73.3 bits (172), Expect = 6e-12
Identities = 34/71 (47%), Positives = 43/71 (60%)
Frame = +2
Query: 74 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 253
EL +PGS++GDD +YN IVTAHA N VPL++GAPD+AFPR+NN
Sbjct: 41 ELSSPGSMLGDDHLYNVIVTAHAFVMIFFLVMPTMIGGFGNWFVPLMIGAPDMAFPRLNN 100
Query: 254 KDFDSYPPPLY 286
F PP L+
Sbjct: 101 ISFWLLPPALF 111
Score = 66.1 bits (154), Expect = 8e-10
Identities = 34/68 (50%), Positives = 41/68 (60%)
Frame = +1
Query: 304 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 483
+VE GAGTG TVYPPL+S AH G SVD+AIFSLHLAG+SS
Sbjct: 118 LVEQGAGTGWTVYPPLASIQAHSGGSVDMAIFSLHLAGLSSILGAMNFITTVMNMRTPGM 177
Query: 484 SFDQLPLF 507
+ ++PLF
Sbjct: 178 TMSRIPLF 185
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 68.9 bits (161), Expect = 1e-10
Identities = 32/49 (65%), Positives = 35/49 (71%)
Frame = +3
Query: 513 AVGXTAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF 659
A+ TA AGAIT+LLTDRN NTSF+DPAGGGDPILY HLF
Sbjct: 187 AIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLF 235
Score = 64.5 bits (150), Expect = 3e-09
Identities = 35/67 (52%), Positives = 39/67 (58%)
Frame = +1
Query: 307 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 486
VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS +
Sbjct: 118 VEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMT 177
Query: 487 FDQLPLF 507
+LPLF
Sbjct: 178 LHKLPLF 184
Score = 62.1 bits (144), Expect = 1e-08
Identities = 37/96 (38%), Positives = 44/96 (45%), Gaps = 2/96 (2%)
Frame = +2
Query: 2 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXX 175
GTLY EL PG L GD Q+YN I+TAHA
Sbjct: 14 GTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPA 73
Query: 176 XXXXXXN*LVPLILGAPDIAFPRINNKDFDSYPPPL 283
N LVP+++GAPD+AFPR+NN F PP L
Sbjct: 74 MVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 67.7 bits (158), Expect = 3e-10
Identities = 30/55 (54%), Positives = 36/55 (65%)
Frame = +3
Query: 513 AVGXTAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLFWIFGTS 677
A+ TA + +T+LL DRN NTSFF+ AGGGDPILY HLFW FGT+
Sbjct: 188 AILITAVLLLLTLPVLSAGVTMLLLDRNFNTSFFEVAGGGDPILYEHLFWFFGTT 242
Score = 62.5 bits (145), Expect = 1e-08
Identities = 33/68 (48%), Positives = 40/68 (58%)
Frame = +1
Query: 304 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 483
+VE+GAGTG TVYPPL+S AH G SVDLAIF+LH+ ISS
Sbjct: 118 LVESGAGTGWTVYPPLASIQAHSGPSVDLAIFALHMTSISSLLGAINFIVTTLNMRTNGM 177
Query: 484 SFDQLPLF 507
+ +LPLF
Sbjct: 178 TMHKLPLF 185
Score = 46.8 bits (106), Expect = 6e-04
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +2
Query: 74 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 247
EL PG L G++Q++N +V HA N ++PL++GA D AFPRI
Sbjct: 39 ELAAPGQQYLHGNNQLFNVLVVGHAILMIFFMVMPALIGGFGNYMLPLMIGATDTAFPRI 98
Query: 248 NNKDF 262
NN F
Sbjct: 99 NNIGF 103
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 66.9 bits (156), Expect = 5e-10
Identities = 32/65 (49%), Positives = 38/65 (58%)
Frame = +3
Query: 525 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLFWIFGTS*SLYFNLPG 704
T+F AG++ LL DRN NTSF+D GG+P+LY HLFW FG LP
Sbjct: 201 TSFLLVLSVPVLAGSLLFLLLDRNFNTSFYDTKKGGNPLLYQHLFWFFGHPEVYVIILPV 260
Query: 705 FGIIS 719
FGIIS
Sbjct: 261 FGIIS 265
Score = 48.4 bits (110), Expect = 2e-04
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +2
Query: 74 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 247
EL +PG G Q+YN+++T H N ++PL+LGAP++AFPR+
Sbjct: 49 ELSSPGGHLFFGSGQVYNSVLTMHGVLMIFFLVMPILIGGFGNWMLPLMLGAPEMAFPRV 108
Query: 248 NNKDF 262
N F
Sbjct: 109 NALSF 113
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 66.9 bits (156), Expect = 5e-10
Identities = 29/53 (54%), Positives = 36/53 (67%)
Frame = +3
Query: 561 AGAITILLTDRNLNTSFFDPAGGGDPILYPHLFWIFGTS*SLYFNLPGFGIIS 719
AG +T++L DRN NTSF+D GGGD IL+ H+FW FG LP FG+IS
Sbjct: 206 AGGVTLILCDRNFNTSFYDVVGGGDLILFQHIFWFFGHPEVYIILLPVFGLIS 258
Score = 47.2 bits (107), Expect = 4e-04
Identities = 21/61 (34%), Positives = 29/61 (47%)
Frame = +2
Query: 89 GSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNKDFDS 268
G L GD Q YN ++T+H N +P++ G PD+ FPR+NN F
Sbjct: 48 GILFGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFIPVMAGFPDMVFPRLNNMSFWM 107
Query: 269 Y 271
Y
Sbjct: 108 Y 108
Score = 36.7 bits (81), Expect = 0.59
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +1
Query: 304 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 426
+ E G G G T+YP L H + D +F++HL GISS
Sbjct: 120 LTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLGISS 160
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 66.5 bits (155), Expect = 6e-10
Identities = 29/53 (54%), Positives = 36/53 (67%)
Frame = +3
Query: 561 AGAITILLTDRNLNTSFFDPAGGGDPILYPHLFWIFGTS*SLYFNLPGFGIIS 719
A +T+LL DR+ +TSF+ P GGGDPIL+ HLFW FG LP FG+IS
Sbjct: 206 AAGLTLLLLDRHFSTSFYYPEGGGDPILWQHLFWFFGHPEVYILILPAFGVIS 258
Score = 46.8 bits (106), Expect = 6e-04
Identities = 21/37 (56%), Positives = 28/37 (75%)
Frame = +1
Query: 316 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 426
G G G T+YPPLS++ G +DLA+FSLH+AG+SS
Sbjct: 123 GLGCGWTMYPPLSNSEFMDGLPIDLAVFSLHMAGMSS 159
Score = 36.3 bits (80), Expect = 0.78
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = +2
Query: 74 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 253
EL +PG + +Y++I+T HA N +PL++ D++ PR+NN
Sbjct: 42 ELSHPGEWLQVGYMYHSIMTMHAFMMIFFFVMPTSIGGLGNWFIPLMIKIKDLSMPRLNN 101
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 66.5 bits (155), Expect = 6e-10
Identities = 29/49 (59%), Positives = 33/49 (67%)
Frame = +3
Query: 525 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLFWIFG 671
TAF + IT+LL DRN NTSFF+ +GGGDPILY HLFW FG
Sbjct: 192 TAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFG 240
Score = 64.5 bits (150), Expect = 3e-09
Identities = 35/68 (51%), Positives = 40/68 (58%)
Frame = +1
Query: 304 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 483
+VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL ISS
Sbjct: 118 LVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGM 177
Query: 484 SFDQLPLF 507
+ +LPLF
Sbjct: 178 TMHKLPLF 185
Score = 48.4 bits (110), Expect = 2e-04
Identities = 27/65 (41%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +2
Query: 74 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 247
EL PGS L G+ Q++N +V HA N L+PL++GA D AFPRI
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGATDTAFPRI 98
Query: 248 NNKDF 262
NN F
Sbjct: 99 NNIAF 103
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 66.1 bits (154), Expect = 8e-10
Identities = 28/53 (52%), Positives = 36/53 (67%)
Frame = +3
Query: 561 AGAITILLTDRNLNTSFFDPAGGGDPILYPHLFWIFGTS*SLYFNLPGFGIIS 719
A +T+LL DRN NTSFF +GGGDP+LY H+FW FG +P FG++S
Sbjct: 221 AAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHPEVYILIVPVFGVVS 273
Score = 60.9 bits (141), Expect = 3e-08
Identities = 39/131 (29%), Positives = 55/131 (41%)
Frame = +1
Query: 304 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 483
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 135 LIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGM 194
Query: 484 SFDQLPLFDEL*GXXXXXXXXXXXXXXXXXXXX*QIET*IHHFLILLEEETPFYIHIYFG 663
+ +LPLF F ++ P F
Sbjct: 195 DYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFW 254
Query: 664 FLGHPEVYILI 696
F GHPEVYILI
Sbjct: 255 FFGHPEVYILI 265
Score = 47.2 bits (107), Expect = 4e-04
Identities = 25/69 (36%), Positives = 35/69 (50%)
Frame = +2
Query: 83 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNKDF 262
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 263 DSYPPPLYY 289
P + +
Sbjct: 121 VVLLPSMLF 129
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 66.1 bits (154), Expect = 8e-10
Identities = 28/53 (52%), Positives = 36/53 (67%)
Frame = +3
Query: 561 AGAITILLTDRNLNTSFFDPAGGGDPILYPHLFWIFGTS*SLYFNLPGFGIIS 719
A +T+LL DRN NTSFF +GGGDP+LY H+FW FG +P FG++S
Sbjct: 221 AAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHPEVYILIVPVFGVVS 273
Score = 60.9 bits (141), Expect = 3e-08
Identities = 39/131 (29%), Positives = 55/131 (41%)
Frame = +1
Query: 304 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 483
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 135 LIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGM 194
Query: 484 SFDQLPLFDEL*GXXXXXXXXXXXXXXXXXXXX*QIET*IHHFLILLEEETPFYIHIYFG 663
+ +LPLF F ++ P F
Sbjct: 195 DYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFW 254
Query: 664 FLGHPEVYILI 696
F GHPEVYILI
Sbjct: 255 FFGHPEVYILI 265
Score = 47.2 bits (107), Expect = 4e-04
Identities = 25/69 (36%), Positives = 35/69 (50%)
Frame = +2
Query: 83 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNKDF 262
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 263 DSYPPPLYY 289
P + +
Sbjct: 121 VVLLPSMLF 129
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 64.5 bits (150), Expect = 3e-09
Identities = 35/67 (52%), Positives = 39/67 (58%)
Frame = +1
Query: 307 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 486
VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS +
Sbjct: 118 VEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMT 177
Query: 487 FDQLPLF 507
+LPLF
Sbjct: 178 LHKLPLF 184
Score = 62.1 bits (144), Expect = 1e-08
Identities = 37/96 (38%), Positives = 44/96 (45%), Gaps = 2/96 (2%)
Frame = +2
Query: 2 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXX 175
GTLY EL PG L GD Q+YN I+TAHA
Sbjct: 14 GTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPA 73
Query: 176 XXXXXXN*LVPLILGAPDIAFPRINNKDFDSYPPPL 283
N LVP+++GAPD+AFPR+NN F PP L
Sbjct: 74 MVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 63.7 bits (148), Expect = 4e-09
Identities = 28/52 (53%), Positives = 33/52 (63%)
Frame = +3
Query: 564 GAITILLTDRNLNTSFFDPAGGGDPILYPHLFWIFGTS*SLYFNLPGFGIIS 719
G + +LL+D + NT FFDP GDPILY HLFW FG LP FG+IS
Sbjct: 210 GGVLMLLSDLHFNTLFFDPTFAGDPILYQHLFWFFGHPEVYILILPAFGVIS 261
Score = 36.7 bits (81), Expect = 0.59
Identities = 18/40 (45%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Frame = +1
Query: 310 ENGAGTG*TVYPPLSSNIAHRGR-SVDLAIFSLHLAGISS 426
E G GTG T+YPPLS+++ +VD+ IF L ++G++S
Sbjct: 124 EFGGGTGWTLYPPLSTSLMSLSPVAVDVIIFGLLVSGVAS 163
Score = 33.5 bits (73), Expect = 5.5
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +2
Query: 113 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 253
+YN I T H N +P++ G+P++A+PRIN+
Sbjct: 58 LYNMIFTIHGIIMIFFNIMPGLFGGFGNYFLPILCGSPELAYPRINS 104
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 62.1 bits (144), Expect = 1e-08
Identities = 37/96 (38%), Positives = 44/96 (45%), Gaps = 2/96 (2%)
Frame = +2
Query: 2 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXX 175
GTLY EL PG L GD Q+YN I+TAHA
Sbjct: 14 GTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPA 73
Query: 176 XXXXXXN*LVPLILGAPDIAFPRINNKDFDSYPPPL 283
N LVP+++GAPD+AFPR+NN F PP L
Sbjct: 74 MVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 60.9 bits (141), Expect = 3e-08
Identities = 24/37 (64%), Positives = 29/37 (78%)
Frame = +3
Query: 561 AGAITILLTDRNLNTSFFDPAGGGDPILYPHLFWIFG 671
A +T+LL DRN NTSFF +GGGDP+LY H+FW FG
Sbjct: 221 AAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFG 257
Score = 57.6 bits (133), Expect = 3e-07
Identities = 26/68 (38%), Positives = 40/68 (58%)
Frame = +1
Query: 304 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 483
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 135 LIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGM 194
Query: 484 SFDQLPLF 507
+ +LPLF
Sbjct: 195 DYSKLPLF 202
Score = 47.2 bits (107), Expect = 4e-04
Identities = 25/69 (36%), Positives = 35/69 (50%)
Frame = +2
Query: 83 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNKDF 262
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 263 DSYPPPLYY 289
P + +
Sbjct: 121 VVLLPSMLF 129
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 60.5 bits (140), Expect = 4e-08
Identities = 27/53 (50%), Positives = 34/53 (64%)
Frame = +3
Query: 561 AGAITILLTDRNLNTSFFDPAGGGDPILYPHLFWIFGTS*SLYFNLPGFGIIS 719
A IT++LTD++L T F+D GGDP+LY HLFW FG LP FG+ S
Sbjct: 187 AVGITLILTDKHLGTCFYDATMGGDPLLYQHLFWFFGHPEVYVVILPVFGLFS 239
Score = 36.7 bits (81), Expect = 0.59
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +1
Query: 319 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 426
A G T YPPLSS SV+ ++FSLHLAGI+S
Sbjct: 112 ASAGWTFYPPLSS----LSPSVEFSVFSLHLAGIAS 143
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 59.7 bits (138), Expect = 7e-08
Identities = 33/96 (34%), Positives = 44/96 (45%), Gaps = 2/96 (2%)
Frame = +2
Query: 2 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXX 175
GTLY EL PG+ I G+ Q+YN ++TAHA
Sbjct: 18 GTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFLMIFFMVMPA 77
Query: 176 XXXXXXN*LVPLILGAPDIAFPRINNKDFDSYPPPL 283
N VP+++G+PD+AFPR+NN F PP L
Sbjct: 78 MIGGFGNWFVPILIGSPDMAFPRLNNISFWLLPPSL 113
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 59.7 bits (138), Expect = 7e-08
Identities = 27/65 (41%), Positives = 34/65 (52%)
Frame = +3
Query: 525 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLFWIFGTS*SLYFNLPG 704
T+F ++ DR+ NT FF+ + GDP+LY HLFW FG LPG
Sbjct: 197 TSFLLLLSLPVVTAVFLMVFLDRHYNTMFFESSNSGDPVLYQHLFWFFGHPEVYIMILPG 256
Query: 705 FGIIS 719
FGIIS
Sbjct: 257 FGIIS 261
Score = 40.7 bits (91), Expect = 0.036
Identities = 20/40 (50%), Positives = 30/40 (75%)
Frame = +1
Query: 307 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 426
+E G+GTG T+YPPLS+++++ G +D IF L AGI+S
Sbjct: 126 LEIGSGTGWTLYPPLSTSLSNVG--IDFIIFGLLAAGIAS 163
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 59.3 bits (137), Expect = 1e-07
Identities = 28/41 (68%), Positives = 31/41 (75%)
Frame = +1
Query: 304 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 426
+VE G G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 57.6 bits (133), Expect = 3e-07
Identities = 26/51 (50%), Positives = 33/51 (64%)
Frame = +3
Query: 567 AITILLTDRNLNTSFFDPAGGGDPILYPHLFWIFGTS*SLYFNLPGFGIIS 719
A+ +LL DR L ++FFDP GG +L+ H FWIFG LPGFG+IS
Sbjct: 224 ALAMLLIDRWLGSAFFDPTRGGSAVLWQHYFWIFGHPEVYILILPGFGMIS 274
Score = 33.1 bits (72), Expect = 7.3
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +2
Query: 74 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 253
+L P + +++N + T H N VPL++GA D+AFPR+N+
Sbjct: 60 QLAFPNNTFLSPEMFNQLFTMHGTTMVFLVGMPVLTGFA-NYFVPLMIGARDVAFPRLNS 118
Query: 254 KDF 262
F
Sbjct: 119 FGF 121
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 57.6 bits (133), Expect = 3e-07
Identities = 26/68 (38%), Positives = 40/68 (58%)
Frame = +1
Query: 304 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 483
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 135 LIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGM 194
Query: 484 SFDQLPLF 507
+ +LPLF
Sbjct: 195 DYSKLPLF 202
Score = 52.4 bits (120), Expect = 1e-05
Identities = 21/34 (61%), Positives = 27/34 (79%)
Frame = +3
Query: 561 AGAITILLTDRNLNTSFFDPAGGGDPILYPHLFW 662
A +T+LL DRN NTSFF +GGGDP+LY H+F+
Sbjct: 221 AAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFY 254
Score = 47.2 bits (107), Expect = 4e-04
Identities = 25/69 (36%), Positives = 35/69 (50%)
Frame = +2
Query: 83 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNKDF 262
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 263 DSYPPPLYY 289
P + +
Sbjct: 121 VVLLPSMLF 129
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 56.4 bits (130), Expect = 7e-07
Identities = 30/68 (44%), Positives = 38/68 (55%)
Frame = +1
Query: 304 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 483
+VE GAGTG TVY PL+ +H G +VDLAIFSLHL+G SS
Sbjct: 123 LVEAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLHLSGFSSLLGAINFITTFINMRTIGM 182
Query: 484 SFDQLPLF 507
++ +PLF
Sbjct: 183 KYENVPLF 190
Score = 50.0 bits (114), Expect = 6e-05
Identities = 24/50 (48%), Positives = 30/50 (60%)
Frame = +3
Query: 513 AVGXTAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLFW 662
AV TA A +T+ + DRN NTSFF+ AGGGD +LY HLF+
Sbjct: 193 AVLFTAILLLLSLPVLAAGLTMGIFDRNFNTSFFEYAGGGDAVLYQHLFY 242
Score = 49.2 bits (112), Expect = 1e-04
Identities = 29/72 (40%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +2
Query: 74 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 247
EL N GS L G+ Q +N ++TAHA N L+PL+LGA D+AF R+
Sbjct: 44 ELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMAFARL 103
Query: 248 NNKDFDSYPPPL 283
NN F P L
Sbjct: 104 NNISFWLLVPSL 115
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 56.4 bits (130), Expect = 7e-07
Identities = 25/53 (47%), Positives = 32/53 (60%)
Frame = +3
Query: 561 AGAITILLTDRNLNTSFFDPAGGGDPILYPHLFWIFGTS*SLYFNLPGFGIIS 719
A A+ +L D TSFF+P GGGDP++Y HLFW + LP FG+IS
Sbjct: 214 ASALILLSFDLIAGTSFFNPVGGGDPVVYQHLFWFYSHPAVYIMILPFFGVIS 266
Score = 36.3 bits (80), Expect = 0.78
Identities = 21/68 (30%), Positives = 30/68 (44%)
Frame = +2
Query: 74 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 253
EL P ++YN ++T H N L+PL++G D+AFPR+N
Sbjct: 55 ELATPSPDFVQPEMYNQLMTLHGTIMIFLWIVPAGAAFA-NYLIPLMVGTEDMAFPRLNA 113
Query: 254 KDFDSYPP 277
F PP
Sbjct: 114 VAFWLTPP 121
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 56.0 bits (129), Expect = 9e-07
Identities = 26/47 (55%), Positives = 28/47 (59%)
Frame = +2
Query: 593 KLKYIIF*SCWRRRPHFISTFILDFWDILKFIF*FTRIWYNFPKLFP 733
K KYIIF S W +F+STFIL FW F FT IWYNF FP
Sbjct: 7 KFKYIIFWSSWSSWSYFMSTFILIFWTPSSLYFNFTSIWYNFSYYFP 53
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 56.0 bits (129), Expect = 9e-07
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = +1
Query: 304 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 402
+VENGAGTG TVYPPLSS AH G SVDLAI+S
Sbjct: 33 MVENGAGTGWTVYPPLSSGTAHAGASVDLAIYS 65
Score = 52.0 bits (119), Expect = 1e-05
Identities = 26/54 (48%), Positives = 29/54 (53%)
Frame = +2
Query: 509 MSCRXYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPHFISTFILDFW 670
M C Y TCFS S+Y IIN K KY IF W P+ +STFIL FW
Sbjct: 98 MICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSPYSLSTFILIFW 151
Score = 37.9 bits (84), Expect = 0.26
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +2
Query: 209 LILGAPDIAFPRINNKDFDSYPPPL 283
L+LGAPD+AFPR+NN F PP L
Sbjct: 1 LMLGAPDMAFPRMNNMSFWMLPPSL 25
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 55.6 bits (128), Expect = 1e-06
Identities = 24/53 (45%), Positives = 34/53 (64%)
Frame = +3
Query: 561 AGAITILLTDRNLNTSFFDPAGGGDPILYPHLFWIFGTS*SLYFNLPGFGIIS 719
AGA+T+L D+ L T+FF+PA GGDP++Y ++FW + LP FG S
Sbjct: 159 AGAVTMLFLDKYLGTNFFNPAKGGDPLIYQNIFWFYSHPVVYVQVLPVFGFYS 211
Score = 41.1 bits (92), Expect = 0.027
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +2
Query: 86 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 250
PG + D + YN ++T H N L+PL++GA D+AFPR+N
Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAFPRLN 56
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 54.4 bits (125), Expect = 3e-06
Identities = 26/57 (45%), Positives = 31/57 (54%)
Frame = +3
Query: 564 GAITILLTDRNLNTSFFDPAGGGDPILYPHLFWIFGTS*SLYFNLPGFGIISPNYFP 734
G +LL D + TSFF P GGGDP+L+ H FW + LP FGI S FP
Sbjct: 230 GGAVMLLFDLSFGTSFFRPEGGGDPVLFQHFFWFYSHPAVYVLVLPVFGIFS-ELFP 285
Score = 36.7 bits (81), Expect = 0.59
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +2
Query: 74 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 253
EL P + + D +YN + T H N L+P ++GAPD+AFP++N
Sbjct: 64 ELITPPADLVDPSVYNGLYTMHGTVMLFLFLFPILNGFN-NLLIPTMIGAPDMAFPKLNA 122
Query: 254 KDF 262
F
Sbjct: 123 AAF 125
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 54.0 bits (124), Expect = 4e-06
Identities = 25/42 (59%), Positives = 28/42 (66%)
Frame = +3
Query: 594 NLNTSFFDPAGGGDPILYPHLFWIFGTS*SLYFNLPGFGIIS 719
N T+FFDPAGGGD IL+ HLF FG LPGFG+IS
Sbjct: 191 NYYTTFFDPAGGGDXILFQHLFXFFGHPEVYILILPGFGMIS 232
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 52.8 bits (121), Expect = 8e-06
Identities = 26/51 (50%), Positives = 31/51 (60%)
Frame = +3
Query: 567 AITILLTDRNLNTSFFDPAGGGDPILYPHLFWIFGTS*SLYFNLPGFGIIS 719
A+ +LL DRN T+FF AGG DPI + HLFW FG LP GI+S
Sbjct: 260 ALIMLLLDRNFGTTFFTVAGG-DPIFWQHLFWFFGHPEVYVLVLPPMGIVS 309
Score = 33.9 bits (74), Expect = 4.2
Identities = 20/68 (29%), Positives = 29/68 (42%)
Frame = +2
Query: 74 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 253
EL + +YN ++T+H N +PL++ A D+AFPRIN
Sbjct: 96 ELATSSETLISPSLYNGLLTSHGITMLFLFGTPMIAAFG-NYFIPLLIDADDMAFPRINA 154
Query: 254 KDFDSYPP 277
F PP
Sbjct: 155 IAFWLLPP 162
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 52.4 bits (120), Expect = 1e-05
Identities = 26/51 (50%), Positives = 32/51 (62%)
Frame = +3
Query: 567 AITILLTDRNLNTSFFDPAGGGDPILYPHLFWIFGTS*SLYFNLPGFGIIS 719
AIT LL DRN+N++ +D G DP+LY HLFW FG LP FG+ S
Sbjct: 217 AITGLLLDRNINSTIYDVIG--DPVLYQHLFWFFGHPEVYVIILPVFGLTS 265
Score = 33.5 bits (73), Expect = 5.5
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +1
Query: 325 TG*TVYPPLSSNIAHR-GRSVDLAIFSLHLAGISS 426
+G T+YPPLS+ A G ++DL++ +H+ GISS
Sbjct: 135 SGWTLYPPLSTRDADNIGVNIDLSLLVVHVLGISS 169
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 52.0 bits (119), Expect = 1e-05
Identities = 24/51 (47%), Positives = 31/51 (60%)
Frame = +3
Query: 567 AITILLTDRNLNTSFFDPAGGGDPILYPHLFWIFGTS*SLYFNLPGFGIIS 719
A T L+ DR + T FF+PA GGD +L+ HLFW FG LP G++S
Sbjct: 221 ASTSLILDRLVGTHFFNPAEGGDVLLWQHLFWFFGHPEVYIIFLPAVGMVS 271
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 51.2 bits (117), Expect = 3e-05
Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +3
Query: 564 GAITILLTDRNL-NTSFFDPAGGGDPILYPHLFWIFGTS*SLYFNLPGFGIIS 719
G + +L+T NL FDPA GGDP+L+ HLFW + LP FG++S
Sbjct: 229 GLLLVLVTVENLFGFGMFDPARGGDPVLFQHLFWFYSHPAVYIMVLPSFGVMS 281
Score = 41.9 bits (94), Expect = 0.016
Identities = 22/59 (37%), Positives = 27/59 (45%)
Frame = +2
Query: 74 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 250
EL PG I D YN T H N ++PL+LGA D+AFPR+N
Sbjct: 70 ELLTPGPTIMDAMTYNRTFTLHGLVMIFLFMIPAIPAVFGNFMLPLMLGAKDVAFPRLN 128
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 51.2 bits (117), Expect = 3e-05
Identities = 24/51 (47%), Positives = 29/51 (56%)
Frame = +3
Query: 567 AITILLTDRNLNTSFFDPAGGGDPILYPHLFWIFGTS*SLYFNLPGFGIIS 719
A +L DRN T FFD A GG P+L+ HLFW+F LP GI+S
Sbjct: 241 AFLLLWLDRNAGTHFFDVAHGGRPLLWQHLFWMFAHPWVYVVVLPAMGIVS 291
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 50.8 bits (116), Expect = 3e-05
Identities = 21/50 (42%), Positives = 31/50 (62%)
Frame = +3
Query: 570 ITILLTDRNLNTSFFDPAGGGDPILYPHLFWIFGTS*SLYFNLPGFGIIS 719
+ +++ DR T+FF+P GG+ +++ HLFWIFG LP FGI S
Sbjct: 215 LALMMLDRLFGTNFFNPELGGNTVIWEHLFWIFGHPEVYILILPAFGIFS 264
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 50.4 bits (115), Expect = 4e-05
Identities = 25/54 (46%), Positives = 32/54 (59%)
Frame = +1
Query: 346 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 507
PL+S+IAH G SVD+AIFSLHLAG+SS + D++PLF
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLF 125
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 50.4 bits (115), Expect = 4e-05
Identities = 23/51 (45%), Positives = 31/51 (60%)
Frame = +3
Query: 567 AITILLTDRNLNTSFFDPAGGGDPILYPHLFWIFGTS*SLYFNLPGFGIIS 719
A+ ++ DR+ T+FF+ A GGDPIL HLFW FG +P FG I+
Sbjct: 366 AVIMMAFDRHWQTTFFEYAYGGDPILSQHLFWFFGHPEVYVLIIPTFGFIN 416
Score = 35.5 bits (78), Expect = 1.4
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +2
Query: 74 ELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 247
EL +P S GD Y +VTAH N L+P +G+ D+A+PR+
Sbjct: 88 ELAHPESPFFKGDSLRYLQVVTAHGLIMVFFVVVPILFGGFANFLIPYHVGSKDVAYPRL 147
Query: 248 NNKDF 262
N+ F
Sbjct: 148 NSIGF 152
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 50.0 bits (114), Expect = 6e-05
Identities = 28/51 (54%), Positives = 30/51 (58%)
Frame = +3
Query: 567 AITILLTDRNLNTSFFDPAGGGDPILYPHLFWIFGTS*SLYFNLPGFGIIS 719
AI +LL DRN TSFF AG G IL+ HLFW FG LP GIIS
Sbjct: 292 AIMMLLFDRNFGTSFF--AGEGGAILWQHLFWFFGHPEVYIIVLPPMGIIS 340
Score = 45.2 bits (102), Expect = 0.002
Identities = 24/68 (35%), Positives = 35/68 (51%)
Frame = +2
Query: 74 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 253
EL +PG + + YN+++T+H N L+PL++GA D+AFPRIN
Sbjct: 122 ELADPGMTVISNTFYNSLLTSHGITMLFLFATPIIAAFS-NYLIPLLIGADDMAFPRINA 180
Query: 254 KDFDSYPP 277
F PP
Sbjct: 181 IAFWLLPP 188
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 49.6 bits (113), Expect = 8e-05
Identities = 25/52 (48%), Positives = 30/52 (57%)
Frame = +2
Query: 506 LMSCRXYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPHFISTFIL 661
+M C YS +TC WSYYN IN SKLKYI+F +F+ST IL
Sbjct: 83 IMICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILFWPSSSWGSYFMSTPIL 134
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 49.2 bits (112), Expect = 1e-04
Identities = 26/55 (47%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Frame = +3
Query: 567 AITILLTDRNLNTSFFDPA-----GGGDPILYPHLFWIFGTS*SLYFNLPGFGII 716
A +LL DR+ T FF GGGDPIL+ HLFWIFG LP +GI+
Sbjct: 238 AALLLLLDRSFGTEFFVAGASAVRGGGDPILWQHLFWIFGHPEVYIMILPAWGIL 292
Score = 34.3 bits (75), Expect = 3.1
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +2
Query: 116 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNKDF 262
Y I T H N L+PL++GA D+AFPR+N F
Sbjct: 86 YQQIFTTHGLVMIFFAVTPVLIGTFGNLLIPLMIGARDMAFPRLNMYSF 134
Score = 32.7 bits (71), Expect = 9.6
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 319 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 426
AG G T Y PLS+N+ G L + ++ + G+SS
Sbjct: 155 AGAGWTTYTPLSTNVGMPGMGQTLVVAAIFVTGVSS 190
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 49.2 bits (112), Expect = 1e-04
Identities = 29/72 (40%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +2
Query: 74 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 247
EL N GS L G+ Q +N ++TAHA N L+PL+LGA D+AF R+
Sbjct: 44 ELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMAFARL 103
Query: 248 NNKDFDSYPPPL 283
NN F P L
Sbjct: 104 NNISFWLLVPSL 115
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 48.4 bits (110), Expect = 2e-04
Identities = 24/47 (51%), Positives = 27/47 (57%)
Frame = +3
Query: 579 LLTDRNLNTSFFDPAGGGDPILYPHLFWIFGTS*SLYFNLPGFGIIS 719
LL DR+ T FF P GGD +L+ HLFW FG LP GIIS
Sbjct: 227 LLFDRHFGTRFFLPNLGGDAVLWQHLFWFFGHPEVYILILPTMGIIS 273
Score = 34.7 bits (76), Expect = 2.4
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +2
Query: 74 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 250
+LG P + +YN + T H N +VPL++GA D+AFPR+N
Sbjct: 59 QLGVPDNTFLTPDVYNQMFTMHGTTMIFLGLMPLNVGLG-NYMVPLMIGARDMAFPRLN 116
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 48.4 bits (110), Expect = 2e-04
Identities = 23/37 (62%), Positives = 25/37 (67%)
Frame = +1
Query: 316 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 426
G G VYPP SS +AH +VDL IF LHLAGISS
Sbjct: 111 GVGXXWXVYPPXSSGLAHSSGAVDLGIFXLHLAGISS 147
Score = 37.1 bits (82), Expect = 0.45
Identities = 25/69 (36%), Positives = 29/69 (42%)
Frame = +2
Query: 77 LGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNK 256
L G +IG QI VTA A L PL +GAP +A PR+ N
Sbjct: 31 LSXXGQVIGXGQIXXVGVTAXALVMIFFFVMPTLXGGFGXXLXPLXVGAPXMAXPRLXNM 90
Query: 257 DFDSYPPPL 283
F PP L
Sbjct: 91 SFWLLPPSL 99
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 48.4 bits (110), Expect = 2e-04
Identities = 27/58 (46%), Positives = 31/58 (53%), Gaps = 10/58 (17%)
Frame = +3
Query: 576 ILLTDRNLNTSFFDPA----------GGGDPILYPHLFWIFGTS*SLYFNLPGFGIIS 719
+LL DR L TSFF P GGG P+L+ HLFW FG LP FGI+S
Sbjct: 238 MLLLDRLLGTSFFMPTLVEMGQLSKYGGGSPLLFQHLFWFFGHPEVYIVALPAFGIVS 295
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 48.0 bits (109), Expect = 2e-04
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Frame = +3
Query: 561 AGAITILLTDRNLNTSFF-----DPAGGGDPILYPHLFWIFGTS*SLYFNLPGFGIIS 719
AGAI +LL +R+L FF DPA GDP L+ H+FW FG LP G++S
Sbjct: 209 AGAIMLLL-ERHLGMHFFTPVPGDPAASGDPRLFQHIFWFFGHPEVYILVLPAMGLVS 265
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 48.0 bits (109), Expect = 2e-04
Identities = 21/34 (61%), Positives = 25/34 (73%)
Frame = +3
Query: 561 AGAITILLTDRNLNTSFFDPAGGGDPILYPHLFW 662
A A+ +LLTDR + FF+PA GGDPI Y HLFW
Sbjct: 205 AAALLMLLTDRLGVSGFFNPAVGGDPIAYAHLFW 238
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 47.2 bits (107), Expect = 4e-04
Identities = 22/46 (47%), Positives = 30/46 (65%)
Frame = +3
Query: 561 AGAITILLTDRNLNTSFFDPAGGGDPILYPHLFWIFGTS*SLYFNL 698
AG IT+LL+DRN N FF GG PIL+ ++ W+FG + L+ L
Sbjct: 36 AGTITMLLSDRNFNKFFFILIGGEYPILHQYMLWLFGHTDVLFLIL 81
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 46.8 bits (106), Expect = 6e-04
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +2
Query: 74 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 247
EL PG+ L G+ Q++N +V HA N L+PL++GA D++F R+
Sbjct: 39 ELAAPGNQYLGGNHQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGASDMSFARL 98
Query: 248 NNKDFDSYPPPL 283
NN F PP L
Sbjct: 99 NNISFWLLPPAL 110
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 46.0 bits (104), Expect = 0.001
Identities = 23/51 (45%), Positives = 30/51 (58%)
Frame = +3
Query: 567 AITILLTDRNLNTSFFDPAGGGDPILYPHLFWIFGTS*SLYFNLPGFGIIS 719
A+ +L DR L T FF GG+ +LY +LFWI+G + LP FG IS
Sbjct: 268 ALAMLGADRYLGTHFFTAGLGGNLMLYTNLFWIWGHPEVYFVVLPAFGFIS 318
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 46.0 bits (104), Expect = 0.001
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = +3
Query: 588 DRNLNTSFFDPAGGGDPILYPHLFWIFG 671
+R + FFDP GGDP+L+ HLFWIFG
Sbjct: 254 ERGFDWPFFDPERGGDPLLWQHLFWIFG 281
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 45.6 bits (103), Expect = 0.001
Identities = 21/51 (41%), Positives = 27/51 (52%)
Frame = +3
Query: 567 AITILLTDRNLNTSFFDPAGGGDPILYPHLFWIFGTS*SLYFNLPGFGIIS 719
A+ +L+ DR +FF+ GG + Y HLFW FG LP GIIS
Sbjct: 225 ALIMLMFDRTFAANFFEVLRGGSVVFYQHLFWTFGHPEVYILILPAMGIIS 275
Score = 33.9 bits (74), Expect = 4.2
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +2
Query: 74 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 250
+L PG + + +N + T HA N +PL++GA D+AFPR+N
Sbjct: 57 QLARPGLEVVTARTFNALFTMHATTMIFLGVMPLLSAFM-NYFLPLMIGARDVAFPRLN 114
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 45.2 bits (102), Expect = 0.002
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +3
Query: 576 ILLTDRNLNTSFFDPAGGGDPILYPHLFWIFGTS*SLYFNLPGFGIIS 719
+L +R L FFD GGDP+L+ HLFW+FG LP G+++
Sbjct: 250 LLEAERLLGLPFFDHTLGGDPLLWQHLFWLFGHPEVYIIFLPAAGMVA 297
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 45.2 bits (102), Expect = 0.002
Identities = 22/47 (46%), Positives = 27/47 (57%)
Frame = +3
Query: 579 LLTDRNLNTSFFDPAGGGDPILYPHLFWIFGTS*SLYFNLPGFGIIS 719
+L DR L +DPA GG +L+ HLFW FG LP FGI+S
Sbjct: 235 VLYDRKLGGHLYDPANGGS-LLWQHLFWFFGHPEVYVLALPFFGIVS 280
Score = 35.9 bits (79), Expect = 1.0
Identities = 20/60 (33%), Positives = 29/60 (48%)
Frame = +2
Query: 71 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 250
AEL PG ++ +N + T H N ++PL +GAPD+AFPR+N
Sbjct: 65 AELFTPGLQFLSNEQFNQLFTMHGTVMLLLYGTPIVWGFA-NYVLPLQIGAPDVAFPRLN 123
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 44.0 bits (99), Expect = 0.004
Identities = 20/51 (39%), Positives = 27/51 (52%)
Frame = +3
Query: 567 AITILLTDRNLNTSFFDPAGGGDPILYPHLFWIFGTS*SLYFNLPGFGIIS 719
A +L +R+ FF GGDP+L+ HLFW FG LP G++S
Sbjct: 231 ATMLLEIERSFGWPFFTAERGGDPLLWQHLFWFFGHPEVYIIFLPAAGLVS 281
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 43.2 bits (97), Expect = 0.007
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +3
Query: 567 AITILLTDRNLNTSFFDPAGGGDPILYPHLFWIFGTS*SLYFNLPGFGIIS 719
A ++L +R + S+F+PA GGDP+L+ FW + LP GI++
Sbjct: 215 ATLLVLLERKIGLSWFNPAVGGDPVLFQQFFWFYSHPTVYVMLLPYLGILA 265
Score = 35.9 bits (79), Expect = 1.0
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = +2
Query: 74 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 250
+L P + + YN I+T H N +VPL+LGA D+A PR+N
Sbjct: 52 QLAVPNNQFLTGEQYNQILTLHGATMLFFFIIQAGLTGFGNFVVPLMLGARDVALPRVN 110
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 42.7 bits (96), Expect = 0.009
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +3
Query: 567 AITILLTDRNLNTSFFDPAGGGDPILYPHLFWIF 668
A+T+L D+ + T FFD A GGD + Y +LFW +
Sbjct: 205 AVTMLTFDKYIGTHFFDAAAGGDALTYQNLFWFY 238
Score = 39.1 bits (87), Expect = 0.11
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +2
Query: 74 ELGNPGSLIGDD-QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 250
EL G I DD +YNT + H N +PL++GA D+AFPR+N
Sbjct: 42 ELSQIGPTITDDPSVYNTWLYFHGAAMILAFQIPALTGFFANYFIPLMIGAKDVAFPRVN 101
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 42.7 bits (96), Expect = 0.009
Identities = 20/48 (41%), Positives = 26/48 (54%)
Frame = +3
Query: 576 ILLTDRNLNTSFFDPAGGGDPILYPHLFWIFGTS*SLYFNLPGFGIIS 719
+L +R + FF A GGD +L+ HLFW+FG LP G IS
Sbjct: 224 LLELERAFDMPFFQAAAGGDALLWQHLFWLFGHPEVYIIFLPAAGAIS 271
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 42.7 bits (96), Expect = 0.009
Identities = 22/53 (41%), Positives = 28/53 (52%)
Frame = +3
Query: 561 AGAITILLTDRNLNTSFFDPAGGGDPILYPHLFWIFGTS*SLYFNLPGFGIIS 719
AG + L +R T FFD A GG P+L+ LFW FG LP G++S
Sbjct: 202 AGLVFAYL-ERLWGTPFFDSALGGSPVLWQQLFWFFGHPEVYILILPAMGLVS 253
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 42.3 bits (95), Expect = 0.012
Identities = 21/52 (40%), Positives = 29/52 (55%)
Frame = +3
Query: 564 GAITILLTDRNLNTSFFDPAGGGDPILYPHLFWIFGTS*SLYFNLPGFGIIS 719
GA+ +L DR L+ FF GG+ ++Y +LFW +G LP FGI S
Sbjct: 249 GALAMLALDRYLDFHFFTAELGGNAMMYLNLFWAWGHPEVYILVLPAFGIFS 300
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 42.3 bits (95), Expect = 0.012
Identities = 20/33 (60%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Frame = +3
Query: 576 ILLTDRNLNTSFF-DPAGGGDPILYPHLFWIFG 671
+LL DRNL T FF +PAGG +L+ HLFW FG
Sbjct: 217 LLLLDRNLGTEFFLNPAGGA--LLWDHLFWFFG 247
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 41.9 bits (94), Expect = 0.016
Identities = 22/66 (33%), Positives = 30/66 (45%)
Frame = +2
Query: 74 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 253
EL PG I D YN + T H N L+P+++GA D+AFP++N
Sbjct: 63 ELLTPGPTIMDAMTYNRMFTLHGVVMIFLFMIPAIPSGFGNFLLPIMIGAKDVAFPKLNL 122
Query: 254 KDFDSY 271
F Y
Sbjct: 123 LSFYVY 128
Score = 41.5 bits (93), Expect = 0.021
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +3
Query: 567 AITILLTDRNLNTSFFDPAGGGDPILYPHLFWIFGTS*SLYFNLPGFGIIS 719
++ ++ + FDPA GGDP+L+ H FW + LP +IS
Sbjct: 224 SLLLVAVEHAFGWGIFDPARGGDPVLFQHFFWFYSHPAVYIMVLPAMAVIS 274
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 41.5 bits (93), Expect = 0.021
Identities = 20/51 (39%), Positives = 27/51 (52%)
Frame = +3
Query: 567 AITILLTDRNLNTSFFDPAGGGDPILYPHLFWIFGTS*SLYFNLPGFGIIS 719
A +L +R + FF GGDP+L+ HLFW FG LP G++S
Sbjct: 290 ATALLELERAFHWPFFAAHLGGDPLLWQHLFWFFGHPEVYIIFLPAAGMVS 340
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 41.5 bits (93), Expect = 0.021
Identities = 21/51 (41%), Positives = 27/51 (52%)
Frame = +3
Query: 567 AITILLTDRNLNTSFFDPAGGGDPILYPHLFWIFGTS*SLYFNLPGFGIIS 719
A+ +L DR FF GG P+L+ +LFWI+G LP FGI S
Sbjct: 245 ALALLSFDRLFGAHFFTLEAGGMPMLWANLFWIWGHPEVYIVILPAFGIFS 295
Score = 36.3 bits (80), Expect = 0.78
Identities = 22/64 (34%), Positives = 28/64 (43%)
Frame = +2
Query: 71 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 250
A+L P + D YN I T H N +VPL +GA D+AFP +N
Sbjct: 80 AQLALPNNSFLDSNHYNEIFTTHGTIMIIFMAMPFLIGLI-NVVVPLQIGARDVAFPYLN 138
Query: 251 NKDF 262
N F
Sbjct: 139 NLSF 142
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 41.1 bits (92), Expect = 0.027
Identities = 20/48 (41%), Positives = 25/48 (52%)
Frame = +3
Query: 576 ILLTDRNLNTSFFDPAGGGDPILYPHLFWIFGTS*SLYFNLPGFGIIS 719
+L +R FF A GGD +L+ HLFW+FG LP G IS
Sbjct: 224 LLELERAFGLPFFQVAEGGDSLLWQHLFWLFGHPEVYIIFLPAAGAIS 271
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 41.1 bits (92), Expect = 0.027
Identities = 21/51 (41%), Positives = 26/51 (50%)
Frame = +3
Query: 567 AITILLTDRNLNTSFFDPAGGGDPILYPHLFWIFGTS*SLYFNLPGFGIIS 719
A +L DR FF A GDPIL+ HLFW FG +P G++S
Sbjct: 228 ASLMLALDRMAGMHFFT-AASGDPILWQHLFWFFGHPEVYIIFIPALGMVS 277
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 41.1 bits (92), Expect = 0.027
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = +3
Query: 567 AITILLTDRNLNTSFFDPAGGGDPILYPHLFWIFGTS*SLYFNLPGFGIIS 719
A+ +L DR L+ F GG+P++Y +LFW +G LP FG+ S
Sbjct: 249 ALALLTVDRYLDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGVFS 299
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 38.3 bits (85), Expect = 0.19
Identities = 24/62 (38%), Positives = 29/62 (46%), Gaps = 11/62 (17%)
Frame = +3
Query: 567 AITILLTDRNLNTSFFDPAG-----------GGDPILYPHLFWIFGTS*SLYFNLPGFGI 713
A +L DR TSFF P+G GG +L+ HLFW FG LP GI
Sbjct: 242 ACILLCLDRVAGTSFFIPSGLVFNDHVIPHGGGSALLWQHLFWFFGHPEVYIAILPAMGI 301
Query: 714 IS 719
+S
Sbjct: 302 VS 303
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 38.3 bits (85), Expect = 0.19
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 11/59 (18%)
Frame = +3
Query: 576 ILLTDRNLNTSFFDP-----------AGGGDPILYPHLFWIFGTS*SLYFNLPGFGIIS 719
++L DR + T FF P AGGG P+L+ HLFW + LP G++S
Sbjct: 246 MMLADRLIGTGFFLPEGLVVNNSPMAAGGGQPLLWQHLFWFYSHPAVYIMILPAMGMVS 304
Score = 35.1 bits (77), Expect = 1.8
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +2
Query: 110 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 250
+ Y +VT HA N L+PL++GA D+AFP +N
Sbjct: 86 EFYTVLVTMHATVMIFLVIIPILAGAFGNFLIPLMIGADDMAFPTLN 132
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 37.5 bits (83), Expect = 0.34
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = +3
Query: 579 LLTDRNLNTSFFDPAGGGDPILYPHLFWIFGTS*SLYFNLPGFGIIS 719
+ DR L+T F+ GG +LY +L W +G LP FGI S
Sbjct: 248 IFLDRTLSTHFYSSFYGGQQMLYINLIWAWGHPEVYILILPSFGIFS 294
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 37.1 bits (82), Expect = 0.45
Identities = 24/61 (39%), Positives = 30/61 (49%), Gaps = 10/61 (16%)
Frame = +3
Query: 567 AITILLTDRNLNTSFFDP----AG------GGDPILYPHLFWIFGTS*SLYFNLPGFGII 716
A +L+ DR+L TSFF AG GG P+L+ HLFW G +P GI
Sbjct: 257 AALLLIFDRSLGTSFFLSEIYIAGEALHHQGGSPVLFQHLFWFLGHPEVYIVLIPALGIT 316
Query: 717 S 719
S
Sbjct: 317 S 317
>UniRef50_Q5ABE2 Cluster: Putative uncharacterized protein CLN3;
n=1; Candida albicans|Rep: Putative uncharacterized
protein CLN3 - Candida albicans (Yeast)
Length = 785
Score = 35.9 bits (79), Expect = 1.0
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Frame = -1
Query: 646 YKMGSPPPAGSKNDVFKFRSVNN---IVIAPAKTGSDNNNKNAVXPTAHQI 503
Y+M +PP + +KN K S NN IA T ++NNN N+ P HQ+
Sbjct: 572 YQMVTPPNSANKNSN-KSNSANNNNTTTIATTTTTTNNNNNNSQLPAPHQL 621
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 35.1 bits (77), Expect = 1.8
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +3
Query: 579 LLTDRNLNTSFFDPAGGGDPILYPHLFWIFGTS*SLYFNLPGFGIIS 719
L DR L+ FF GG+ + + ++FW+FG LP FG+ S
Sbjct: 273 LALDRYLDFHFFTNGLGGNQMNFLNMFWLFGHPEVYILILPAFGVYS 319
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 33.9 bits (74), Expect = 4.2
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +2
Query: 110 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 250
+ Y + T HA N L+PL++GA D+AFP++N
Sbjct: 90 EFYTMLFTMHATVMIFLVIIPILAGMFGNFLIPLMIGADDMAFPKLN 136
Score = 32.7 bits (71), Expect = 9.6
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 624 GGGDPILYPHLFWIFGTS*SLYFNLPGFGIIS 719
GGG P+L+ HLFW + LP G++S
Sbjct: 276 GGGQPLLWQHLFWFYSHPAVYIMLLPIMGMVS 307
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 578,686,852
Number of Sequences: 1657284
Number of extensions: 10099196
Number of successful extensions: 22729
Number of sequences better than 10.0: 95
Number of HSP's better than 10.0 without gapping: 21758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22618
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59677054775
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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