Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0246
(750 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88314-9|AAF99881.1| 408|Caenorhabditis elegans Hypothetical pr... 71 1e-12
Z71258-4|CAA95783.2| 423|Caenorhabditis elegans Hypothetical pr... 68 6e-12
Z77663-14|CAB01214.2| 568|Caenorhabditis elegans Hypothetical p... 65 4e-11
AJ581300-1|CAE46113.1| 568|Caenorhabditis elegans flavin monoox... 65 4e-11
Z70286-2|CAA94290.1| 529|Caenorhabditis elegans Hypothetical pr... 64 8e-11
AJ582071-1|CAE46541.1| 529|Caenorhabditis elegans flavin monoox... 64 8e-11
Z70286-4|CAA94291.2| 533|Caenorhabditis elegans Hypothetical pr... 63 2e-10
AJ582070-1|CAE46540.1| 533|Caenorhabditis elegans flavin monoox... 63 2e-10
AJ582073-1|CAE46543.1| 518|Caenorhabditis elegans flavin monoox... 58 7e-09
AC006663-1|AAF39901.1| 518|Caenorhabditis elegans Flavin-contai... 58 7e-09
AL031633-22|CAB97238.1| 512|Caenorhabditis elegans Hypothetical... 55 5e-08
AJ582072-1|CAE46542.1| 512|Caenorhabditis elegans flavin monoox... 55 5e-08
Z81512-6|CAB04171.3| 455|Caenorhabditis elegans Hypothetical pr... 42 5e-04
Z35602-2|CAA84671.3| 824|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z78198-5|CAB01571.1| 437|Caenorhabditis elegans Hypothetical pr... 38 0.006
AF067936-2|AAC19213.1| 527|Caenorhabditis elegans Hypothetical ... 31 0.87
Z49889-5|CAA90070.1| 2207|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z49868-5|CAA90032.1| 2207|Caenorhabditis elegans Hypothetical pr... 29 2.7
AY152852-1|AAN62580.1| 770|Caenorhabditis elegans suppressor of... 29 2.7
AL032636-3|CAA21604.1| 770|Caenorhabditis elegans Hypothetical ... 29 2.7
AC006696-7|AAF39988.1| 140|Caenorhabditis elegans Hypothetical ... 29 4.7
AC006696-6|AAF39986.1| 141|Caenorhabditis elegans Hypothetical ... 29 4.7
AC006696-5|AAF39987.1| 141|Caenorhabditis elegans Hypothetical ... 29 4.7
U02289-1|AAA18934.1| 1439|Caenorhabditis elegans GTPase-activati... 28 8.1
L16687-1|AAK71357.2| 1317|Caenorhabditis elegans Hypothetical pr... 28 8.1
>U88314-9|AAF99881.1| 408|Caenorhabditis elegans Hypothetical
protein C46H11.2 protein.
Length = 408
Score = 70.5 bits (165), Expect = 1e-12
Identities = 36/97 (37%), Positives = 52/97 (53%)
Frame = +1
Query: 97 RACIIGAGYSGLGAARYMKQYHVNFTVFEATRNFGGTWHFDPHVGTDEDGLASFSSMYND 276
R C+IGAG +GL AA++ + VFE T N GGTW + G S SSMY +
Sbjct: 4 RVCVIGAGAAGLAAAKHSLAQGLEVEVFEQTGNVGGTWVYSKQTG-------SHSSMYQN 56
Query: 277 LRTNTPRQTMEYYDFPFPEGTPSYPSATCFLDYLKSF 387
+ TN P++ M++ PF PS+ + +YL+ F
Sbjct: 57 MTTNLPKEVMQFRGVPFRNELPSFLTHENVREYLQEF 93
Score = 35.5 bits (78), Expect = 0.041
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = +2
Query: 515 DFIVVANGPYNTPVWPKYDGIETFEGNMIHSHDYKDRK 628
D + V NG Y P P + FEG+ IHSHDY+ K
Sbjct: 131 DIVFVCNGHYFAPNNPYEES--AFEGSFIHSHDYRHSK 166
>Z71258-4|CAA95783.2| 423|Caenorhabditis elegans Hypothetical
protein C01H6.4 protein.
Length = 423
Score = 68.1 bits (159), Expect = 6e-12
Identities = 36/103 (34%), Positives = 54/103 (52%)
Frame = +1
Query: 97 RACIIGAGYSGLGAARYMKQYHVNFTVFEATRNFGGTWHFDPHVGTDEDGLASFSSMYND 276
+ CIIGAG +GL +A++ + +FE T GGTW + G SS+Y
Sbjct: 4 KICIIGAGAAGLVSAKHAIKQGYQVDIFEQTDQVGGTWVYSEKTGCH-------SSLYKV 56
Query: 277 LRTNTPRQTMEYYDFPFPEGTPSYPSATCFLDYLKSFVKHFDL 405
++TN P++ M + D PF + PS+ S L+YL F K F +
Sbjct: 57 MKTNLPKEAMLFQDEPFRDELPSFMSHEHVLEYLNEFSKDFPI 99
Score = 31.9 bits (69), Expect = 0.50
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2
Query: 515 DFIVVANGPYNTPVWPKYDGIETFEGNMIHSHDYK 619
D + V NG + P+ P + F+G +IHSHDY+
Sbjct: 131 DVVFVCNGHFFEPLNPYQNSY--FKGKLIHSHDYR 163
>Z77663-14|CAB01214.2| 568|Caenorhabditis elegans Hypothetical
protein F53F4.5 protein.
Length = 568
Score = 65.3 bits (152), Expect = 4e-11
Identities = 34/108 (31%), Positives = 57/108 (52%)
Frame = +1
Query: 97 RACIIGAGYSGLGAARYMKQYHVNFTVFEATRNFGGTWHFDPHVGTDEDGLASFSSMYND 276
R C++GAG SGL A + + ++ FE T + GG W++ P G + G ++
Sbjct: 2 RVCVVGAGASGLPAIKACIEEGLDVVCFEKTADIGGLWNYRP--GQKDIG----GTVMES 55
Query: 277 LRTNTPRQTMEYYDFPFPEGTPSYPSATCFLDYLKSFVKHFDLLSHIQ 420
NT ++ M Y DFP P ++ T ++Y+KS+ +HF L+ I+
Sbjct: 56 TVVNTSKEMMAYSDFPPPAEFANFMHHTKVIEYIKSYAEHFGLMDKIR 103
Score = 33.5 bits (73), Expect = 0.16
Identities = 9/39 (23%), Positives = 24/39 (61%)
Frame = +2
Query: 521 IVVANGPYNTPVWPKYDGIETFEGNMIHSHDYKDRKGVQ 637
+++ G + P +P+ ++ F+G ++H++DY + G +
Sbjct: 134 LILCTGHHAEPSYPELKNLDNFKGKVVHAYDYTNTSGYE 172
>AJ581300-1|CAE46113.1| 568|Caenorhabditis elegans flavin
monooxygenase protein.
Length = 568
Score = 65.3 bits (152), Expect = 4e-11
Identities = 34/108 (31%), Positives = 57/108 (52%)
Frame = +1
Query: 97 RACIIGAGYSGLGAARYMKQYHVNFTVFEATRNFGGTWHFDPHVGTDEDGLASFSSMYND 276
R C++GAG SGL A + + ++ FE T + GG W++ P G + G ++
Sbjct: 2 RVCVVGAGASGLPAIKACIEEGLDVVCFEKTADIGGLWNYRP--GQKDIG----GTVMES 55
Query: 277 LRTNTPRQTMEYYDFPFPEGTPSYPSATCFLDYLKSFVKHFDLLSHIQ 420
NT ++ M Y DFP P ++ T ++Y+KS+ +HF L+ I+
Sbjct: 56 TVVNTSKEMMAYSDFPPPAEFANFMHHTKVIEYIKSYAEHFGLMDKIR 103
Score = 33.5 bits (73), Expect = 0.16
Identities = 9/39 (23%), Positives = 24/39 (61%)
Frame = +2
Query: 521 IVVANGPYNTPVWPKYDGIETFEGNMIHSHDYKDRKGVQ 637
+++ G + P +P+ ++ F+G ++H++DY + G +
Sbjct: 134 LILCTGHHAEPSYPELKNLDNFKGKVVHAYDYTNTSGYE 172
>Z70286-2|CAA94290.1| 529|Caenorhabditis elegans Hypothetical
protein K08C7.5 protein.
Length = 529
Score = 64.5 bits (150), Expect = 8e-11
Identities = 38/110 (34%), Positives = 56/110 (50%)
Frame = +1
Query: 97 RACIIGAGYSGLGAARYMKQYHVNFTVFEATRNFGGTWHFDPHVGTDEDGLASFSSMYND 276
R +IGAG SGL + R+ Y + T FEA+ + GG W + H T+E SS+
Sbjct: 5 RVAVIGAGASGLPSIRHGLLYGFDVTCFEASDDIGGLWRYKSH-ETNE------SSVMKT 57
Query: 277 LRTNTPRQTMEYYDFPFPEGTPSYPSATCFLDYLKSFVKHFDLLSHIQLR 426
NT ++ Y DF E ++ L+Y KS+ +H L+ HI+LR
Sbjct: 58 TVINTSKEMTAYSDFTPQENLANFMHNNEMLNYFKSYAEHHGLMKHIKLR 107
Score = 47.6 bits (108), Expect = 9e-06
Identities = 19/42 (45%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = +2
Query: 515 DFIVVANGPYNTPVWPK-YDGIETFEGNMIHSHDYKDRKGVQ 637
D ++V +G + P WPK + G F+G ++HSHDYKD KG +
Sbjct: 142 DGVLVCSGHHAIPHWPKPFPGQNEFKGRIVHSHDYKDHKGYE 183
>AJ582071-1|CAE46541.1| 529|Caenorhabditis elegans flavin
monooxygenase protein.
Length = 529
Score = 64.5 bits (150), Expect = 8e-11
Identities = 38/110 (34%), Positives = 56/110 (50%)
Frame = +1
Query: 97 RACIIGAGYSGLGAARYMKQYHVNFTVFEATRNFGGTWHFDPHVGTDEDGLASFSSMYND 276
R +IGAG SGL + R+ Y + T FEA+ + GG W + H T+E SS+
Sbjct: 5 RVAVIGAGASGLPSIRHGLLYGFDVTCFEASDDIGGLWRYKSH-ETNE------SSVMKT 57
Query: 277 LRTNTPRQTMEYYDFPFPEGTPSYPSATCFLDYLKSFVKHFDLLSHIQLR 426
NT ++ Y DF E ++ L+Y KS+ +H L+ HI+LR
Sbjct: 58 TVINTSKEMTAYSDFTPQENLANFMHNNEMLNYFKSYAEHHGLMKHIKLR 107
Score = 47.6 bits (108), Expect = 9e-06
Identities = 19/42 (45%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = +2
Query: 515 DFIVVANGPYNTPVWPK-YDGIETFEGNMIHSHDYKDRKGVQ 637
D ++V +G + P WPK + G F+G ++HSHDYKD KG +
Sbjct: 142 DGVLVCSGHHAIPHWPKPFPGQNEFKGRIVHSHDYKDHKGYE 183
>Z70286-4|CAA94291.2| 533|Caenorhabditis elegans Hypothetical
protein K08C7.2 protein.
Length = 533
Score = 62.9 bits (146), Expect = 2e-10
Identities = 34/105 (32%), Positives = 52/105 (49%)
Frame = +1
Query: 106 IIGAGYSGLGAARYMKQYHVNFTVFEATRNFGGTWHFDPHVGTDEDGLASFSSMYNDLRT 285
I+GAG SGL + R+ Y ++ T FE T++ GG WH+ P SS+
Sbjct: 10 IVGAGASGLPSLRHALLYGIDVTCFERTKDVGGLWHYKPQE-------TELSSVMKTTVI 62
Query: 286 NTPRQTMEYYDFPFPEGTPSYPSATCFLDYLKSFVKHFDLLSHIQ 420
NT ++ Y DFP ++ T YL ++ KH++L HI+
Sbjct: 63 NTSKEMTAYSDFPPESRMANFMHNTEMYRYLLNYSKHYELEKHIK 107
Score = 46.8 bits (106), Expect = 2e-05
Identities = 18/42 (42%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Frame = +2
Query: 515 DFIVVANGPYNTPVWP-KYDGIETFEGNMIHSHDYKDRKGVQ 637
D +++ +G + TP WP K+ G + F+G +IHSH YKD +G +
Sbjct: 144 DGVMLCSGHHTTPNWPQKFRGQDDFKGRIIHSHSYKDHRGYE 185
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +3
Query: 630 AYKNRKVLIVGAGASGLGS 686
A N+K+LIVGAGASGL S
Sbjct: 2 APNNKKLLIVGAGASGLPS 20
>AJ582070-1|CAE46540.1| 533|Caenorhabditis elegans flavin
monooxygenase protein.
Length = 533
Score = 62.9 bits (146), Expect = 2e-10
Identities = 34/105 (32%), Positives = 52/105 (49%)
Frame = +1
Query: 106 IIGAGYSGLGAARYMKQYHVNFTVFEATRNFGGTWHFDPHVGTDEDGLASFSSMYNDLRT 285
I+GAG SGL + R+ Y ++ T FE T++ GG WH+ P SS+
Sbjct: 10 IVGAGASGLPSLRHALLYGIDVTCFERTKDVGGLWHYKPQE-------TELSSVMKTTVI 62
Query: 286 NTPRQTMEYYDFPFPEGTPSYPSATCFLDYLKSFVKHFDLLSHIQ 420
NT ++ Y DFP ++ T YL ++ KH++L HI+
Sbjct: 63 NTSKEMTAYSDFPPESRMANFMHNTEMYRYLLNYSKHYELEKHIK 107
Score = 46.8 bits (106), Expect = 2e-05
Identities = 18/42 (42%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Frame = +2
Query: 515 DFIVVANGPYNTPVWP-KYDGIETFEGNMIHSHDYKDRKGVQ 637
D +++ +G + TP WP K+ G + F+G +IHSH YKD +G +
Sbjct: 144 DGVMLCSGHHTTPNWPQKFRGQDDFKGRIIHSHSYKDHRGYE 185
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +3
Query: 630 AYKNRKVLIVGAGASGLGS 686
A N+K+LIVGAGASGL S
Sbjct: 2 APNNKKLLIVGAGASGLPS 20
>AJ582073-1|CAE46543.1| 518|Caenorhabditis elegans flavin
monooxygenase protein.
Length = 518
Score = 58.0 bits (134), Expect = 7e-09
Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
Frame = +1
Query: 106 IIGAGYSGLGAARYMKQY-HVNFTVFEATRNFGGTWHFDPHVGTDEDGLASFSSMYNDLR 282
++GAG SGL + R+ + +V T FE + + GG W+F P D+ L S++
Sbjct: 9 VVGAGASGLPSIRHALLHPNVEVTCFEKSGDIGGLWNFKP----DQTDL---STVMKSTV 61
Query: 283 TNTPRQTMEYYDFPFPEGTPSYPSATCFLDYLKSFVKHFDLLSHIQL 423
NT ++ Y DFP + ++ YLKS+ +H+ LL HI+L
Sbjct: 62 INTSKEMTAYSDFPPEDTMANFMHNREMCRYLKSYAEHYGLLKHIKL 108
Score = 41.9 bits (94), Expect = 5e-04
Identities = 18/42 (42%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = +2
Query: 515 DFIVVANGPYNTPVWPK-YDGIETFEGNMIHSHDYKDRKGVQ 637
D +++ +G + P P+ + G E F+G +IHSHDYKD KG +
Sbjct: 144 DGVMICSGHHAIPHIPEPWPGQEKFKGRIIHSHDYKDHKGYE 185
>AC006663-1|AAF39901.1| 518|Caenorhabditis elegans
Flavin-containing monooxygenasefamily protein 5 protein.
Length = 518
Score = 58.0 bits (134), Expect = 7e-09
Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
Frame = +1
Query: 106 IIGAGYSGLGAARYMKQY-HVNFTVFEATRNFGGTWHFDPHVGTDEDGLASFSSMYNDLR 282
++GAG SGL + R+ + +V T FE + + GG W+F P D+ L S++
Sbjct: 9 VVGAGASGLPSIRHALLHPNVEVTCFEKSGDIGGLWNFKP----DQTDL---STVMKSTV 61
Query: 283 TNTPRQTMEYYDFPFPEGTPSYPSATCFLDYLKSFVKHFDLLSHIQL 423
NT ++ Y DFP + ++ YLKS+ +H+ LL HI+L
Sbjct: 62 INTSKEMTAYSDFPPEDTMANFMHNREMCRYLKSYAEHYGLLKHIKL 108
Score = 41.9 bits (94), Expect = 5e-04
Identities = 18/42 (42%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = +2
Query: 515 DFIVVANGPYNTPVWPK-YDGIETFEGNMIHSHDYKDRKGVQ 637
D +++ +G + P P+ + G E F+G +IHSHDYKD KG +
Sbjct: 144 DGVMICSGHHAIPHIPEPWPGQEKFKGRIIHSHDYKDHKGYE 185
>AL031633-22|CAB97238.1| 512|Caenorhabditis elegans Hypothetical
protein Y39A1A.19 protein.
Length = 512
Score = 55.2 bits (127), Expect = 5e-08
Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Frame = +1
Query: 106 IIGAGYSGLGAARYMKQY-HVNFTVFEATRNFGGTWHFDPHVGTDEDGLASFSSMYNDLR 282
++GAG SGL + R+ Y +V T FE T GG W++ P+ S++
Sbjct: 10 VVGAGASGLPSIRHALLYPNVEVTCFEKTNEVGGLWNYKPYK-------TELSTVMKSTV 62
Query: 283 TNTPRQTMEYYDFPFPEGTPSYPSATCFLDYLKSFVKHFDLLSHIQ 420
NT ++ + DFP + ++ T YL ++ KH +LL +I+
Sbjct: 63 INTSKEMTSFSDFPPEDTMANFMHNTEMCRYLNNYAKHHELLKYIK 108
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +2
Query: 515 DFIVVANGPYNTPVWPK-YDGIETFEGNMIHSHDYKDRKGVQ 637
D +++ +G + P PK + G E F+G + HSHDYKD KG +
Sbjct: 145 DGVMLCSGHHAIPHIPKPWPGQEKFKGRITHSHDYKDHKGYE 186
>AJ582072-1|CAE46542.1| 512|Caenorhabditis elegans flavin
monooxygenase protein.
Length = 512
Score = 55.2 bits (127), Expect = 5e-08
Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Frame = +1
Query: 106 IIGAGYSGLGAARYMKQY-HVNFTVFEATRNFGGTWHFDPHVGTDEDGLASFSSMYNDLR 282
++GAG SGL + R+ Y +V T FE T GG W++ P+ S++
Sbjct: 10 VVGAGASGLPSIRHALLYPNVEVTCFEKTNEVGGLWNYKPYK-------TELSTVMKSTV 62
Query: 283 TNTPRQTMEYYDFPFPEGTPSYPSATCFLDYLKSFVKHFDLLSHIQ 420
NT ++ + DFP + ++ T YL ++ KH +LL +I+
Sbjct: 63 INTSKEMTSFSDFPPEDTMANFMHNTEMCRYLNNYAKHHELLKYIK 108
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +2
Query: 515 DFIVVANGPYNTPVWPK-YDGIETFEGNMIHSHDYKDRKGVQ 637
D +++ +G + P PK + G E F+G + HSHDYKD KG +
Sbjct: 145 DGVMLCSGHHAIPHIPKPWPGQEKFKGRITHSHDYKDHKGYE 186
>Z81512-6|CAB04171.3| 455|Caenorhabditis elegans Hypothetical
protein F25C8.2 protein.
Length = 455
Score = 41.9 bits (94), Expect = 5e-04
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = +1
Query: 97 RACIIGAGYSGLGAARYMKQYHVNFTVFEATRNFGG-TWHFDPHVGTDEDGLASFSSMYN 273
+ CIIGAG +GL +A + +Q +++T+FE + GG + F+ +DG F + Y
Sbjct: 8 KVCIIGAGLAGLRSAIHFEQVGIDYTIFEGSNRIGGRVYPFE-----YQDGYLHFGAEYV 62
Query: 274 DLRTNTPRQTMEYYD 318
+ N +E YD
Sbjct: 63 NGVDNEVYNLVEKYD 77
>Z35602-2|CAA84671.3| 824|Caenorhabditis elegans Hypothetical
protein R13G10.2 protein.
Length = 824
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = +1
Query: 97 RACIIGAGYSGLGAARYMKQYHVNFTVFEATRNFGGTWHFDPHVG 231
+ IIGAG SG+ AR++K ++ +FEA FGG D +G
Sbjct: 353 KIAIIGAGISGISTARHLKHLGIDAVLFEAKDRFGGRMMDDQSLG 397
>Z78198-5|CAB01571.1| 437|Caenorhabditis elegans Hypothetical
protein F55C5.6 protein.
Length = 437
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/62 (30%), Positives = 35/62 (56%)
Frame = +1
Query: 85 QKTSRACIIGAGYSGLGAARYMKQYHVNFTVFEATRNFGGTWHFDPHVGTDEDGLASFSS 264
Q+ + IIGAG++GL AA+ ++ + +T+FE + GG + P+ ++G F +
Sbjct: 19 QENASIAIIGAGFAGLRAAQRFEELGIVYTIFEGSDRIGGRVYSFPY----QNGYLQFGA 74
Query: 265 MY 270
Y
Sbjct: 75 EY 76
>AF067936-2|AAC19213.1| 527|Caenorhabditis elegans Hypothetical
protein C24G6.6 protein.
Length = 527
Score = 31.1 bits (67), Expect = 0.87
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +1
Query: 106 IIGAGYSGLGAARYMKQYHV-NFTVFEATRNFGGTWHFDPH 225
I+GAG SGL AR + + + +F ++E GG H P+
Sbjct: 36 IVGAGISGLSTARRLIELGIDDFDIYEGLDRIGGRIHAIPY 76
>Z49889-5|CAA90070.1| 2207|Caenorhabditis elegans Hypothetical protein
W07E11.1 protein.
Length = 2207
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +1
Query: 97 RACIIGAGYSGLGAARYMKQYHVNFTVFEATRNFGG 204
R IIG+G SGLGAA + + V+E GG
Sbjct: 1848 RIAIIGSGPSGLGAAAQLVKVGHTVVVYERKNRVGG 1883
>Z49868-5|CAA90032.1| 2207|Caenorhabditis elegans Hypothetical protein
W07E11.1 protein.
Length = 2207
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +1
Query: 97 RACIIGAGYSGLGAARYMKQYHVNFTVFEATRNFGG 204
R IIG+G SGLGAA + + V+E GG
Sbjct: 1848 RIAIIGSGPSGLGAAAQLVKVGHTVVVYERKNRVGG 1883
>AY152852-1|AAN62580.1| 770|Caenorhabditis elegans suppressor of
presenilin 5 protein.
Length = 770
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 106 IIGAGYSGLGAARYMKQYHVNFTVFEATRNFGGTWH 213
+IGAG +G+ AA ++ + + V EA GG H
Sbjct: 139 VIGAGAAGISAATQLESFGFDVIVLEARNCIGGRIH 174
>AL032636-3|CAA21604.1| 770|Caenorhabditis elegans Hypothetical
protein Y40B1B.6 protein.
Length = 770
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 106 IIGAGYSGLGAARYMKQYHVNFTVFEATRNFGGTWH 213
+IGAG +G+ AA ++ + + V EA GG H
Sbjct: 139 VIGAGAAGISAATQLESFGFDVIVLEARNCIGGRIH 174
>AC006696-7|AAF39988.1| 140|Caenorhabditis elegans Hypothetical
protein W08E12.3 protein.
Length = 140
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -2
Query: 641 VFVRPSDLCNHDCGSCCLQMFLFRR 567
+F++PS CN++ SCC F FRR
Sbjct: 95 IFIQPSQCCNNNNFSCC--PFRFRR 117
>AC006696-6|AAF39986.1| 141|Caenorhabditis elegans Hypothetical
protein W08E12.4 protein.
Length = 141
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -2
Query: 641 VFVRPSDLCNHDCGSCCLQMFLFRR 567
+F++PS CN++ SCC F FRR
Sbjct: 95 IFIQPSQCCNNNNFSCC--PFRFRR 117
>AC006696-5|AAF39987.1| 141|Caenorhabditis elegans Hypothetical
protein W08E12.5 protein.
Length = 141
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -2
Query: 641 VFVRPSDLCNHDCGSCCLQMFLFRR 567
+F++PS CN++ SCC F FRR
Sbjct: 95 IFIQPSQCCNNNNFSCC--PFRFRR 117
>U02289-1|AAA18934.1| 1439|Caenorhabditis elegans GTPase-activating
protein protein.
Length = 1439
Score = 27.9 bits (59), Expect = 8.1
Identities = 20/62 (32%), Positives = 29/62 (46%)
Frame = +3
Query: 558 GPSTTE*KHLKAT*STVMITKIGRAYKNRKVLIVGAGASGLGSRDTVVQRDRQISSQPPL 737
GPS + ++ +A +T K GR +K K G+G GS Q+ + QP L
Sbjct: 722 GPSR-DIENGEAPTATATTPKSGRKWKKSKAAKQGSGGGSSGSSSGSQQQGAAGAPQPVL 780
Query: 738 GV 743
GV
Sbjct: 781 GV 782
>L16687-1|AAK71357.2| 1317|Caenorhabditis elegans Hypothetical
protein C04D8.1 protein.
Length = 1317
Score = 27.9 bits (59), Expect = 8.1
Identities = 20/62 (32%), Positives = 29/62 (46%)
Frame = +3
Query: 558 GPSTTE*KHLKAT*STVMITKIGRAYKNRKVLIVGAGASGLGSRDTVVQRDRQISSQPPL 737
GPS + ++ +A +T K GR +K K G+G GS Q+ + QP L
Sbjct: 600 GPSR-DIENGEAPTATATTPKSGRKWKKSKAAKQGSGGGSSGSSSGSQQQGAAGAPQPVL 658
Query: 738 GV 743
GV
Sbjct: 659 GV 660
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,582,520
Number of Sequences: 27780
Number of extensions: 419850
Number of successful extensions: 1221
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1207
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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