Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0244
(749 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 215 7e-57
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 181 1e-46
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 155 5e-39
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 124 2e-29
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 122 4e-29
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 105 5e-24
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 101 8e-23
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 100 4e-22
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 97 2e-21
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 81 1e-16
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 75 1e-14
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 65 9e-12
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 63 4e-11
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 62 8e-11
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 60 3e-10
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 59 6e-10
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 59 8e-10
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 57 3e-09
SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase Abc... 31 0.23
SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy... 30 0.31
SPCC645.13 |||transcription elongation regulator|Schizosaccharom... 30 0.40
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 29 0.71
SPBC9B6.10 |cdc37||Hsp90 co-chaperone Cdc37|Schizosaccharomyces ... 29 0.71
SPAC3H1.01c |orp3|orc3, SPAP14E8.06c|origin recognition complex ... 27 2.9
SPBC244.02c |||U3 snoRNP-associated protein Utp6 |Schizosaccharo... 26 5.0
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 26 5.0
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 26 5.0
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 26 5.0
SPAC30C2.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 8.7
SPAC4G8.06c |trm12||tRNA methyltransferase Trm12 |Schizosaccharo... 25 8.7
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 215 bits (524), Expect = 7e-57
Identities = 94/154 (61%), Positives = 130/154 (84%)
Frame = +3
Query: 63 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKL 242
M+ K+YD L KLLLIGDSGVGK+C+L RFS++ FT +FI+TIGIDFKI+T+EL GK+IKL
Sbjct: 1 MSTKSYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKL 60
Query: 243 QIXGTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMIL 422
QI TAGQERF TITT+YYRGAMGI+L+YD+T++K+FD++ W N+++HA+E+V K+++
Sbjct: 61 QIWDTAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILI 120
Query: 423 GNKCDMEEKRVVSKERGEAIAREHGIRFMRRRLK 524
GNKCD E++R VS E+G+A+A E G++F+ K
Sbjct: 121 GNKCDCEDQRQVSFEQGQALADELGVKFLEASAK 154
Score = 28.7 bits (61), Expect = 0.94
Identities = 18/53 (33%), Positives = 23/53 (43%)
Frame = +2
Query: 509 ETSAKANINIDRAFSELAEAILDKTAGREADADHSRIAVEXXXXXXXXXXXCC 667
E SAK N+N+D AF LA I K +A+ + S A CC
Sbjct: 150 EASAKTNVNVDEAFFTLAREI--KKQKIDAENEFSNQANNVDLGNDRTVKRCC 200
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 181 bits (440), Expect = 1e-46
Identities = 82/149 (55%), Positives = 113/149 (75%)
Frame = +3
Query: 78 YDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIXGT 257
YD LFKLLLIGDSGVGK+C+L RF+D+ +T ++ISTIG+DFKI+T EL GK +KLQI T
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDT 64
Query: 258 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCD 437
AGQERF TIT+SYYRGA GI++VYD+T++ +F+++ +WL+ ID +A E V ++++GNK D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKSD 124
Query: 438 MEEKRVVSKERGEAIAREHGIRFMRRRLK 524
M +K+VV + A I F+ K
Sbjct: 125 MVDKKVVEYSVAKEFADSLNIPFLETSAK 153
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 155 bits (377), Expect = 5e-39
Identities = 70/144 (48%), Positives = 101/144 (70%)
Frame = +3
Query: 78 YDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIXGT 257
YD LFK +LIGDSGVGK+ +L RF+ N F STIG++F + + L KKIK QI T
Sbjct: 7 YDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDT 66
Query: 258 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCD 437
AGQER+ IT++YYRGA+G ++VYDIT + +FD++ +WL+ + EHA+ ++ M++GNK D
Sbjct: 67 AGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTD 126
Query: 438 MEEKRVVSKERGEAIAREHGIRFM 509
+ R VS E +A A E+ + F+
Sbjct: 127 LLHLRAVSTEEAQAFAAENNLSFI 150
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 124 bits (298), Expect = 2e-29
Identities = 59/145 (40%), Positives = 91/145 (62%)
Frame = +3
Query: 90 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIXGTAGQE 269
FKL+ +G+ VGKT ++ RF + F T+ +TIGIDF KT+ L + ++LQ+ TAGQE
Sbjct: 12 FKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 71
Query: 270 RFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCDMEEK 449
RF ++ SY R + ++VYDITN +F + KW+ ++ +DV +++GNK D+ +K
Sbjct: 72 RFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIEDVRAERGDDVIIVLVGNKTDLADK 131
Query: 450 RVVSKERGEAIAREHGIRFMRRRLK 524
R V++E GE A+E I M K
Sbjct: 132 RQVTQEEGEKKAKELKIMHMETSAK 156
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 122 bits (295), Expect = 4e-29
Identities = 60/150 (40%), Positives = 92/150 (61%), Gaps = 4/150 (2%)
Frame = +3
Query: 63 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVEL----RGK 230
M K++YD L K++L G SG GK+C+L RF N + T+GIDF + + + + K
Sbjct: 1 MDKESYDYLVKIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQK 60
Query: 231 KIKLQIXGTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVE 410
+IKLQI TAGQE+F ++ +YYRGA G +LVYD+TN+ +F+++ WL +I A +
Sbjct: 61 RIKLQIWDTAGQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEELSSWLSDIRAMAPSTIC 120
Query: 411 KMILGNKCDMEEKRVVSKERGEAIAREHGI 500
++ G+K D++ +R VS E E I
Sbjct: 121 VVLAGSKSDLQNQRQVSTEEAAEFCSEKHI 150
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 105 bits (253), Expect = 5e-24
Identities = 60/150 (40%), Positives = 90/150 (60%), Gaps = 5/150 (3%)
Frame = +3
Query: 63 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKL 242
MA K LL K++++G+SGVGKT I+ ++ + F+ + +TIG DF K V + K + L
Sbjct: 1 MAGKKKHLL-KVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTL 59
Query: 243 QIXGTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKW----LRNIDEHANEDVE 410
Q+ TAGQERF ++ ++YRGA +LVYD+ N K+F+ + W L E
Sbjct: 60 QLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFP 119
Query: 411 KMILGNKCDMEE-KRVVSKERGEAIAREHG 497
++LGNK D+EE KR+VSK + A + G
Sbjct: 120 FILLGNKVDVEEQKRMVSKSKALAFCQARG 149
Score = 29.5 bits (63), Expect = 0.54
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +2
Query: 488 RARHPLHETSAKANINIDRAFSELAEAILDKTAGREADAD 607
R P ETSAK IN+ AF +A+ L+ + AD
Sbjct: 148 RGEIPYFETSAKEAINVQEAFETVAKLALENMDSDDIAAD 187
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 101 bits (243), Expect = 8e-23
Identities = 52/143 (36%), Positives = 86/143 (60%), Gaps = 5/143 (3%)
Frame = +3
Query: 84 LLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIXGTAG 263
+ K++++GDSGVGKTC++ +F + F+ + +TIG DF K V + K + LQ+ TAG
Sbjct: 7 VFLKVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAG 66
Query: 264 QERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANED---VEKMILGNKC 434
QERF ++ ++YRGA ++VY++ N K+FD + W + ++D +I+GN+
Sbjct: 67 QERFQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTSQDECAFPFIIVGNQI 126
Query: 435 DME-EKRVVSKERG-EAIAREHG 497
D + KR VS R + +HG
Sbjct: 127 DKDASKRAVSLHRALDYCKSKHG 149
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 99.5 bits (237), Expect = 4e-22
Identities = 53/146 (36%), Positives = 80/146 (54%), Gaps = 2/146 (1%)
Frame = +3
Query: 93 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVEL-RGKKIKLQIXGTAGQE 269
KL+L+GDS VGK+ ++ RF + F STIG F +T+ + +KL+I TAGQE
Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQE 75
Query: 270 RFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCDM-EE 446
R+ ++ YYR A ++VYDIT + + W++ + A E + + GNK D+ +E
Sbjct: 76 RYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEGIVIALAGNKLDLAQE 135
Query: 447 KRVVSKERGEAIAREHGIRFMRRRLK 524
+R V K EA A E + F K
Sbjct: 136 RRAVEKADAEAYAAEANLLFFETSAK 161
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 97.1 bits (231), Expect = 2e-21
Identities = 49/141 (34%), Positives = 82/141 (58%), Gaps = 1/141 (0%)
Frame = +3
Query: 69 KKTYDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQI 248
+ TY +KL+++GD GVGK+ + + +HF + TI ++ K E+ G+ L +
Sbjct: 2 RSTYLREYKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYR-KKCEIDGEGALLDV 60
Query: 249 XGTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMIL-G 425
TAGQE + + Y R G +LVY+IT+ +FD+I + + I ++D ++L
Sbjct: 61 LDTAGQEEYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLVA 120
Query: 426 NKCDMEEKRVVSKERGEAIAR 488
NKCD+E +RVVS+ GE +A+
Sbjct: 121 NKCDLEAERVVSRAEGEQLAK 141
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 81.4 bits (192), Expect = 1e-16
Identities = 41/135 (30%), Positives = 81/135 (60%), Gaps = 2/135 (1%)
Frame = +3
Query: 93 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIXGTAGQER 272
++ ++G VGK+ + ++ +NHF ++ TI F K ++ +G++ +I TAGQ+
Sbjct: 8 RIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTFS-KNIKYKGQEFATEIIDTAGQDE 66
Query: 273 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRN--IDEHANEDVEKMILGNKCDMEE 446
+ + + + G G +LVY IT++ +F ++VK +R+ ++ E V +++GNK D+
Sbjct: 67 YSILNSKHSIGIHGYVLVYSITSKSSF-EMVKIVRDKILNHTGTEWVPIVVVGNKSDLHM 125
Query: 447 KRVVSKERGEAIARE 491
+R V+ E G+A+A E
Sbjct: 126 QRAVTAEEGKALANE 140
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 74.9 bits (176), Expect = 1e-14
Identities = 39/126 (30%), Positives = 71/126 (56%), Gaps = 1/126 (0%)
Frame = +3
Query: 90 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIXGTAGQE 269
FKL+L+GD G GKT + R F +I+T+G++ +I + TAGQE
Sbjct: 10 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQE 69
Query: 270 RFHTITTSYY-RGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCDMEE 446
+ + YY +G GI +++D+T+ T+ ++ W R++ E++ ++ GNK D++E
Sbjct: 70 KLGGLRDGYYIQGQCGI-IMFDVTSRITYKNVPHWWRDL-VRVCENIPIVLCGNKVDVKE 127
Query: 447 KRVVSK 464
++V +K
Sbjct: 128 RKVKAK 133
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 65.3 bits (152), Expect = 9e-12
Identities = 31/119 (26%), Positives = 59/119 (49%)
Frame = +3
Query: 81 DLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIXGTA 260
++ K+ +IGDS +GKT ++ + F T+G++F KT+ +R +I I
Sbjct: 8 NVTIKVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDLG 67
Query: 261 GQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCD 437
GQ F + A+ I+ ++D++ + T + I +W R N+ +++G K D
Sbjct: 68 GQREFVNMLPMVCNDAVAILFMFDLSRKSTLNSIKEWYRQA-RGFNKTAVPILIGTKYD 125
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 63.3 bits (147), Expect = 4e-11
Identities = 33/123 (26%), Positives = 68/123 (55%), Gaps = 1/123 (0%)
Frame = +3
Query: 75 TYDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIXG 254
T +L KL+++GD GKTC+L FS F ++ T+ ++ + VE+ G+ I+L +
Sbjct: 2 TTELRRKLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENY-VADVEVDGRHIELALWD 60
Query: 255 TAGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDI-VKWLRNIDEHANEDVEKMILGNK 431
TAGQE + + Y + +++ + + ++ D++ KW+ + H ++ +++G K
Sbjct: 61 TAGQEDYDRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEV-LHFCSNLPILLVGCK 119
Query: 432 CDM 440
D+
Sbjct: 120 VDL 122
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 62.1 bits (144), Expect = 8e-11
Identities = 34/135 (25%), Positives = 71/135 (52%), Gaps = 1/135 (0%)
Frame = +3
Query: 93 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIXGTAGQER 272
K +++GD VGKTC+L ++ N F + ++ T+ ++ + TV + + L + TAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNYAV-TVMIGDEPYTLGLFDTAGQED 63
Query: 273 FHTITTSYYRGAMGIMLVYDITNEKTFDDI-VKWLRNIDEHANEDVEKMILGNKCDMEEK 449
+ + Y ++ + +T+ +F+++ KW + H V +I+G + D+ +
Sbjct: 64 YDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPEVHHHC-PGVPCLIVGTQIDLRDD 122
Query: 450 RVVSKERGEAIAREH 494
V ++ +AR+H
Sbjct: 123 PSVQQK----LARQH 133
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 60.1 bits (139), Expect = 3e-10
Identities = 32/130 (24%), Positives = 68/130 (52%), Gaps = 1/130 (0%)
Frame = +3
Query: 81 DLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIXGTA 260
+L KL+++GD GKTC+L FS F ++ T+ ++ + VE+ G+ ++L + TA
Sbjct: 4 ELRRKLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENY-VADVEVDGRHVELALWDTA 62
Query: 261 GQERFHTITTSYYRGAMGIMLVYDITNEKTFDDI-VKWLRNIDEHANEDVEKMILGNKCD 437
GQE + + Y + I++ + + + + D++ KW+ + H + +++ K D
Sbjct: 63 GQEDYDRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEV-LHFCSSLPILLVACKAD 121
Query: 438 MEEKRVVSKE 467
+ + +E
Sbjct: 122 LRNDPKIIEE 131
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 59.3 bits (137), Expect = 6e-10
Identities = 33/137 (24%), Positives = 69/137 (50%), Gaps = 1/137 (0%)
Frame = +3
Query: 93 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIXGTAGQER 272
K++++GD GKT +L F+ +F + TI ++ I + + G I+L + TAGQE
Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENY-IHDIFVDGNSIELSLWDTAGQEE 73
Query: 273 FHTITTSYYRGAMGIMLVYDITNEKTFDDIV-KWLRNIDEHANEDVEKMILGNKCDMEEK 449
+ + + Y IM+ + + + + ++++ KWL + + V+ +++ KCD+
Sbjct: 74 YDQLRSLSYSDTHVIMICFAVDSRDSLENVITKWLPEVSSNC-PGVKLVLVALKCDLRGA 132
Query: 450 RVVSKERGEAIAREHGI 500
+ + I E G+
Sbjct: 133 DEEQVDHSKIIDYEEGL 149
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 58.8 bits (136), Expect = 8e-10
Identities = 33/126 (26%), Positives = 67/126 (53%), Gaps = 1/126 (0%)
Frame = +3
Query: 93 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIXGTAGQER 272
KL+++GD GKT +L F+ +F T ++ T+ ++ + + GK ++L + TAGQE
Sbjct: 10 KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENY-VSDCRVDGKSVQLALWDTAGQEE 68
Query: 273 FHTITTSYYRGAMGIMLVYDITNEKTFDDI-VKWLRNIDEHANEDVEKMILGNKCDMEEK 449
+ + Y A I++ + I + + +++ KW+ I+ +V +++G K D+
Sbjct: 69 YERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEINTLC-PNVPFILVGMKADLRSD 127
Query: 450 RVVSKE 467
V +E
Sbjct: 128 PVAIEE 133
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 56.8 bits (131), Expect = 3e-09
Identities = 34/122 (27%), Positives = 61/122 (50%), Gaps = 2/122 (1%)
Frame = +3
Query: 93 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIK-TVELRGKKIKLQIXGTAGQE 269
KL+++GD G GKTC+L FS F ++ T+ ++ T K I+L + TAGQE
Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQE 75
Query: 270 RFHTITTSYYRGAMGIMLVYDITNEKTFDDIV-KWLRNIDEHANEDVEKMILGNKCDMEE 446
+ + Y + I+L + I + +++ KW + +H +++G K D+ +
Sbjct: 76 EYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPEV-QHFCPRTPIVLVGLKADLRK 134
Query: 447 KR 452
R
Sbjct: 135 DR 136
>SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase
Abc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1463
Score = 30.7 bits (66), Expect = 0.23
Identities = 18/67 (26%), Positives = 33/67 (49%)
Frame = +3
Query: 324 VYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCDMEEKRVVSKERGEAIAREHGIR 503
VY ++ DDI L +D+H N D+ + +LG+K + + V+ + +E +
Sbjct: 720 VYSRSDIYLLDDI---LSAVDQHVNRDLVRNLLGSKGLLRSRCVILSTNSLTVLKEASMI 776
Query: 504 FMRRRLK 524
+M R K
Sbjct: 777 YMLRNGK 783
>SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1201
Score = 30.3 bits (65), Expect = 0.31
Identities = 22/58 (37%), Positives = 30/58 (51%)
Frame = -2
Query: 475 SPRSLLTTRFSSISHLLPSIIFSTSSFACSSIFRNHLTISSNVFSFVMSYTSMMPIAP 302
SPRSLLT FS PSIIF + S+F +H +S F++ S+ P+ P
Sbjct: 750 SPRSLLTKIFSEARKNAPSIIFINNVEKWPSLF-SHSFLS----MFLLLLDSISPLEP 802
>SPCC645.13 |||transcription elongation
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 721
Score = 29.9 bits (64), Expect = 0.40
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +3
Query: 384 DEHANEDVEKMILGNKCDMEEKRVVSKERGEAIAREHG 497
+EH D+ GN+ + EE VVS + EAI +E G
Sbjct: 84 EEHQTADLLASNEGNEKNNEENNVVSSDSKEAITKESG 121
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 29.1 bits (62), Expect = 0.71
Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Frame = +3
Query: 90 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIXGTAGQE 269
F L+L G+SG+GKT F + F+TT S +G + K++ K ++++I +E
Sbjct: 29 FTLMLCGESGLGKT----TFCNTLFSTTIKSHMGPE-KVRAKHAE-KTVEIEITKAELEE 82
Query: 270 R-FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEH 392
+ FH T G I N ++ +V+++ D+H
Sbjct: 83 KNFHLRLTVIDTPGFGDF----INNSGCWESVVEFIE--DQH 118
>SPBC9B6.10 |cdc37||Hsp90 co-chaperone Cdc37|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 29.1 bits (62), Expect = 0.71
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +3
Query: 378 NIDEHANEDVEKMILGNKCDMEEKRVVSKERGEAIAREHGIRFMRRRL 521
+I+ H N D + I + D+ EKR V K++ E I G M RRL
Sbjct: 18 DIEVHPNVDKKSFIRWRQRDIHEKRAVRKQKMEDI---KGAMAMNRRL 62
>SPAC3H1.01c |orp3|orc3, SPAP14E8.06c|origin recognition complex
subunit Orp3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 27.1 bits (57), Expect = 2.9
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 330 DITNEKTFDDIVKWLRNIDEHANEDVEK 413
+IT T+D + LR + EHA+E V++
Sbjct: 63 EITTHTTYDSNARVLRQLCEHASEPVDE 90
>SPBC244.02c |||U3 snoRNP-associated protein Utp6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 488
Score = 26.2 bits (55), Expect = 5.0
Identities = 23/87 (26%), Positives = 38/87 (43%)
Frame = +3
Query: 174 FISTIGIDFKIKTVELRGKKIKLQIXGTAGQERFHTITTSYYRGAMGIMLVYDITNEKTF 353
F+S I + ++T+ + K +L I G IT S Y G ++ ++ K F
Sbjct: 54 FLSYIQYEINLETLRAKRHK-RLNITGK--------ITISDYAGPRKVLFLFLRATNKFF 104
Query: 354 DDIVKWLRNIDEHANEDVEKMILGNKC 434
D+ WL I +A + I+G C
Sbjct: 105 GDVTLWLDYI-HYAQKIKAVNIVGKIC 130
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 26.2 bits (55), Expect = 5.0
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +3
Query: 99 LLIGDSGVGKTCIL 140
+L+GD+ GKTCIL
Sbjct: 1873 ILVGDTATGKTCIL 1886
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 26.2 bits (55), Expect = 5.0
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -2
Query: 547 SSVYIYVRFSRRLMKRMPCSRAIASPRSLLTTRFSSISHLLPSI 416
SS + + R+ RR PCS A +SP + T FS + P +
Sbjct: 377 SSDFAHFRYQRRSRPVSPCSTAPSSP-TFSTRSFSPTPDVTPLV 419
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 26.2 bits (55), Expect = 5.0
Identities = 21/54 (38%), Positives = 26/54 (48%)
Frame = -2
Query: 490 SRAIASPRSLLTTRFSSISHLLPSIIFSTSSFACSSIFRNHLTISSNVFSFVMS 329
S ASP S T S+ S L S ++SS A SSI + L SS S + S
Sbjct: 98 STTSASPTSSSLTSSSATSSSLASSSTTSSSLASSSITSSSLASSSITSSSLAS 151
>SPAC30C2.07 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 25.4 bits (53), Expect = 8.7
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 60 KMAKKTYDLLFKLLLIGDSGVGKTCILFRFSDNH 161
K + T D+ F+L+L+ D G K +L F NH
Sbjct: 30 KQYQSTKDVTFRLVLVQDIGDRKKTVL--FDSNH 61
>SPAC4G8.06c |trm12||tRNA methyltransferase Trm12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 418
Score = 25.4 bits (53), Expect = 8.7
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +1
Query: 55 FVKWPKKHTTCYSNCFSSVTPELEKRAY 138
F K K+T C +NC S +P + Y
Sbjct: 386 FSKMLAKNTVCVTNCVKSFSPRVSHIVY 413
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,784,333
Number of Sequences: 5004
Number of extensions: 55740
Number of successful extensions: 205
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 198
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 357280532
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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