Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0243
         (514 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    23   2.1  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    22   3.7  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   4.9  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   6.4  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   8.5  

>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = +3

Query: 273 DIPTSPRPSPSSKASLYLTPSTDPFHTQLRSTXLIPSR 386
           +IP+  R SP     + ++P+T P  +      L PS+
Sbjct: 76  EIPSPKRSSPILAEKVSVSPTTPPTPSPPPEERLTPSK 113


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +2

Query: 341 PVPYPVEKHXPYPVKVAVPQP 403
           PVP PVE+    P     P P
Sbjct: 392 PVPQPVEEVTQKPSSTKAPAP 412


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +3

Query: 396 PNPTRSSNTCH 428
           PNP ++  TCH
Sbjct: 228 PNPCQNGGTCH 238


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -2

Query: 162 RIHTRGSGDHVCPI 121
           R HT  SGD  C +
Sbjct: 453 RYHTSASGDEACSL 466


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3

Query: 18  GIMKTALCLVFLLV 59
           GIM + L L+FLL+
Sbjct: 99  GIMNSTLNLIFLLI 112


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,813
Number of Sequences: 336
Number of extensions: 1972
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12258909
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)