Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0243
(514 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0066 - 536281-537196,537397-537452 30 1.3
11_01_0047 + 358370-360107,360713-361353 29 2.2
11_06_0610 - 25449085-25453284 29 2.9
05_03_0342 - 12704683-12704736,12704827-12704895,12704969-12706003 29 2.9
06_03_1156 - 28069663-28070393,28070966-28071231,28072023-28072909 28 3.8
09_06_0308 - 22199389-22199451,22199604-22199924,22200178-222004... 28 5.1
06_03_1146 - 28004896-28005554,28005664-28005844 28 5.1
06_03_1006 + 26844161-26844198,26844304-26844372,26844526-268445... 28 5.1
05_03_0040 - 7646525-7647775 28 5.1
03_05_0576 + 25765137-25766420 28 5.1
01_01_1173 + 9339169-9339396,9340208-9340954 28 5.1
12_01_1053 - 10840558-10841085,10841363-10841528,10841571-108417... 27 6.7
07_03_0630 - 20097672-20097772,20097983-20102012 27 6.7
05_03_0039 - 7621613-7622695 27 6.7
03_05_1166 - 30876802-30876899,30877233-30878685 27 6.7
11_06_0195 - 21138029-21138389,21139796-21140052 27 8.8
08_02_1144 + 24670224-24670607,24670723-24670928,24671211-246713... 27 8.8
04_04_0318 + 24347364-24348826,24348920-24349048,24349158-243492... 27 8.8
>11_01_0066 - 536281-537196,537397-537452
Length = 323
Score = 29.9 bits (64), Expect = 1.3
Identities = 22/67 (32%), Positives = 24/67 (35%)
Frame = +3
Query: 279 PTSPRPSPSSKASLYLTPSTDPFHTQLRSTXLIPSR*PCPNPTRSSNTCHIT*RSTXRFP 458
P P P S TP P ST P P P TR+S T +T R P
Sbjct: 206 PPRPLPPASPPPPSIATPPPSPASPPPPSTATPPPPSPTPTTTRASPTPPPIPTATVRPP 265
Query: 459 STFPRHT 479
PR T
Sbjct: 266 PPLPRAT 272
>11_01_0047 + 358370-360107,360713-361353
Length = 792
Score = 29.1 bits (62), Expect = 2.2
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +3
Query: 261 STSVDIPTSPRPSPSSKAS 317
S SV PTSP PSPS+ AS
Sbjct: 363 SASVPCPTSPSPSPSAPAS 381
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 28.7 bits (61), Expect = 2.9
Identities = 19/41 (46%), Positives = 23/41 (56%)
Frame = +2
Query: 305 VKGVPVPYAVDRPVPYPVEKHXPYPVKVAVPQPYEVVKHVP 427
VK +P P V P P PV K P P V++P P VVK +P
Sbjct: 1261 VKSLPPPAPVSLPPP-PV-KSLPPPAPVSLPPP--VVKSLP 1297
Score = 27.5 bits (58), Expect = 6.7
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +2
Query: 305 VKGVPVPYAVDRPVPYPVEKHXPYPVKVAVPQPYEVVKHVP 427
VK +P P V +P PV K P P V++P P VK +P
Sbjct: 1277 VKSLPPPAPVS--LPPPVVKSLPPPAPVSLPPP--AVKPLP 1313
>05_03_0342 - 12704683-12704736,12704827-12704895,12704969-12706003
Length = 385
Score = 28.7 bits (61), Expect = 2.9
Identities = 25/65 (38%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = +3
Query: 288 PRPSPSSK-ASLYLTPSTDPFHTQLRSTXLIPSR*PCPNPTRSSNTCHIT*RSTXRFPST 464
P SP SK A+ S P H T LIP R PCP P R +T + T PS
Sbjct: 8 PSHSPQSKHANAIPHASARPTHLH---TFLIPRR-PCPPPVRPPDTPAMPPALTSNPPSF 63
Query: 465 FPRHT 479
P T
Sbjct: 64 RPLST 68
>06_03_1156 - 28069663-28070393,28070966-28071231,28072023-28072909
Length = 627
Score = 28.3 bits (60), Expect = 3.8
Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = +2
Query: 317 PVPYAVDRPVPY--PVEKHXPYPVKVAVPQPYEVVKHVPYH 433
P P P PY P+ ++ PY + PQ ++ H+P H
Sbjct: 22 PPPQYPHHPPPYAAPLPQYAPYARGMPPPQAQQLYSHLPPH 62
>09_06_0308 -
22199389-22199451,22199604-22199924,22200178-22200423,
22202152-22203337,22203487-22203551,22204205-22204486,
22205005-22205106,22205587-22206105
Length = 927
Score = 27.9 bits (59), Expect = 5.1
Identities = 17/34 (50%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +3
Query: 288 PRPSPSSKA-SLYLTPSTD--PFHTQLRSTXLIP 380
P+PSPSS L L+PST H LRST +P
Sbjct: 20 PKPSPSSAPFLLLLSPSTPRLRLHLHLRSTRRLP 53
>06_03_1146 - 28004896-28005554,28005664-28005844
Length = 279
Score = 27.9 bits (59), Expect = 5.1
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = +3
Query: 246 PPGTASTSVDIPTSPRPSPS-SKASLYLTPSTDPFHTQLRSTXLIPSR*PCPNPTRSSNT 422
PP A + P S PSP+ + A+ L PS P T + + P P PT S+ +
Sbjct: 149 PPPVAPVPMPSPASSPPSPAPAAATPSLAPS--PVATTPSPSPSVSPMAPAPAPTTSTPS 206
Query: 423 CHIT*RSTXRFPSTFP 470
+ PST P
Sbjct: 207 SPPAPAAMAPSPSTTP 222
>06_03_1006 +
26844161-26844198,26844304-26844372,26844526-26844591,
26844831-26844902,26844982-26845053,26846179-26846244,
26846409-26846881,26846966-26847324,26847429-26847697,
26847780-26847918,26848323-26848462,26848612-26848768,
26848925-26848978,26849457-26849539,26851085-26851136
Length = 702
Score = 27.9 bits (59), Expect = 5.1
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = +3
Query: 246 PPGTASTSVDIPTSPRPSPSSKASLYLTPSTDPFHTQLRSTXLIPSR*PCPNPTRSSNT 422
PP T PT RP+PS + TPS P + L + PS P+ T S+++
Sbjct: 144 PPSTPGGPAPTPTPTRPAPSPSPTGPPTPS--PTNPNLEPSPPPPSSSAPPSRTPSNSS 200
>05_03_0040 - 7646525-7647775
Length = 416
Score = 27.9 bits (59), Expect = 5.1
Identities = 16/44 (36%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Frame = +2
Query: 308 KGVPVPYAVDRPVPYPVEKHXPYPVKVAVPQP-YEVVKHVPYHV 436
K P P P PYP K P P P+P KH P H+
Sbjct: 367 KPEPKPEPKPEPKPYPEPKPEPKPKPKPEPKPEAPPKKHKPPHI 410
Score = 27.5 bits (58), Expect = 6.7
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +2
Query: 308 KGVPVPYAVDRPVPYPVEKHXPYPVKVAVPQPYEVVKHVP 427
K P P V P P P K P P P+PY K P
Sbjct: 75 KPEPEPKPVPEPEPKPEPKPEPKPEPKPEPKPYPEPKPEP 114
>03_05_0576 + 25765137-25766420
Length = 427
Score = 27.9 bits (59), Expect = 5.1
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +3
Query: 246 PPGTASTSVDIPTSPRPSP 302
PP A+ SV PT PRP P
Sbjct: 93 PPPAAAVSVSPPTQPRPRP 111
>01_01_1173 + 9339169-9339396,9340208-9340954
Length = 324
Score = 27.9 bits (59), Expect = 5.1
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +3
Query: 327 TPSTDPFHTQLRSTXLIPSR*PCPNPTRSSNTCHIT*RSTXRFPSTFPRHTQSKXRCL 500
T S DP + L+ S CPNP+ SS+T + + +F S + + Q K L
Sbjct: 213 TTSLDPLLDSAYAKALMSS---CPNPSPSSSTIDLDVATPLKFDSGYYANLQKKQGAL 267
>12_01_1053 -
10840558-10841085,10841363-10841528,10841571-10841787,
10842321-10842420
Length = 336
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 246 PPGTASTSVDIPTSPRPSPSSK 311
PP TA IP+SP P PS +
Sbjct: 22 PPATADDQGRIPSSPSPKPSCR 43
>07_03_0630 - 20097672-20097772,20097983-20102012
Length = 1376
Score = 27.5 bits (58), Expect = 6.7
Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 5/71 (7%)
Frame = +2
Query: 8 PLKRHNENSALLSFPAGSSSGCQ*EEDDRKQS*TPREE-----IGQTWSPEPRVWIRY*W 172
P K+H E + + SS Q EED+ K+ P EE G W PE R W Y W
Sbjct: 1253 PRKQHMEEQSFIEKEKSSSLNEQAEEDESKKE--PLEEWLQQSEGDQW-PE-REWELYSW 1308
Query: 173 S*RWLXPYTDK 205
R L D+
Sbjct: 1309 VERKLKKELDR 1319
>05_03_0039 - 7621613-7622695
Length = 360
Score = 27.5 bits (58), Expect = 6.7
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +2
Query: 308 KGVPVPYAVDRPVPYPVEKHXPYPVKVAVPQP 403
K P PY +P P PV K P P P+P
Sbjct: 257 KPEPKPYPKPKPEPKPVPKPKPIPHPGPKPKP 288
Score = 27.1 bits (57), Expect = 8.8
Identities = 13/37 (35%), Positives = 15/37 (40%)
Frame = +2
Query: 317 PVPYAVDRPVPYPVEKHXPYPVKVAVPQPYEVVKHVP 427
P P P P P +H P P P+PY K P
Sbjct: 126 PKPKPKPEPKPEPKPEHKPEPKPEPEPKPYPKPKPEP 162
Score = 27.1 bits (57), Expect = 8.8
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +2
Query: 308 KGVPVPYAVDRPVPYPVEKHXPYPVKVAVPQPYEVVKHVP 427
K P P P PYP K P PV P P+ K P
Sbjct: 249 KPEPKPEPKPEPKPYPKPKPEPKPVPKPKPIPHPGPKPKP 288
>03_05_1166 - 30876802-30876899,30877233-30878685
Length = 516
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 246 PPGTASTSVDIPTSPRPSPSSKASLYLTPSTDPFHTQ 356
PP ++S +P P P P K +Y PS +P+HT+
Sbjct: 214 PPKSSSPPTLLPPPP-PPPREK--MYPNPSGEPWHTR 247
>11_06_0195 - 21138029-21138389,21139796-21140052
Length = 205
Score = 27.1 bits (57), Expect = 8.8
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +3
Query: 270 VDIPTSPRPSPSSKASLYLTPST 338
+ +PT PRP+P ++ PST
Sbjct: 111 IQLPTEPRPTPKHSMTMLEAPST 133
>08_02_1144 +
24670224-24670607,24670723-24670928,24671211-24671310,
24671539-24672864
Length = 671
Score = 27.1 bits (57), Expect = 8.8
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = -2
Query: 141 GDHVCPISSLGVQLCFLSSSSHWQPLLLPAGKLSRALFSLCLFN 10
G+ CP+SSL ++ C S++ LL +G +++ L SL + N
Sbjct: 500 GNGRCPMSSLCLRGCKRISNNGIASLLCGSGTINKTLISLDIGN 543
>04_04_0318 +
24347364-24348826,24348920-24349048,24349158-24349293,
24349447-24349535,24349631-24349742,24349836-24349942,
24350033-24350129
Length = 710
Score = 27.1 bits (57), Expect = 8.8
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +2
Query: 275 HTDVTKTITLVKGVPVPYAVDRPVPYPVEKHXP 373
H+DV K V VP + P P P + H P
Sbjct: 153 HSDVAKGKKAVDSVPTELPLPPPPPLPPQDHIP 185
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,310,329
Number of Sequences: 37544
Number of extensions: 269373
Number of successful extensions: 1468
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1388
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1106928780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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