Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0243
(514 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_54456| Best HMM Match : EGF (HMM E-Value=2.3e-31) 33 0.14
SB_15138| Best HMM Match : CLN3 (HMM E-Value=4.4e-05) 32 0.24
SB_44033| Best HMM Match : SRCR (HMM E-Value=1.3) 31 0.56
SB_22238| Best HMM Match : CMAS (HMM E-Value=3.5e-15) 30 0.97
SB_2633| Best HMM Match : Drf_FH1 (HMM E-Value=4) 30 1.3
SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062) 30 1.3
SB_14918| Best HMM Match : Extensin_2 (HMM E-Value=0.35) 30 1.3
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_31795| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_33380| Best HMM Match : Herpes_capsid (HMM E-Value=3) 29 2.2
SB_53577| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_44668| Best HMM Match : 7tm_1 (HMM E-Value=6.1e-05) 29 3.0
SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35) 29 3.0
SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23) 29 3.0
SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.9
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.9
SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_43367| Best HMM Match : SAM_1 (HMM E-Value=0.085) 28 5.2
SB_59417| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_15490| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 28 5.2
SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_7375| Best HMM Match : RVT_1 (HMM E-Value=7.6e-19) 27 6.9
SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74) 27 9.1
SB_50147| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_35845| Best HMM Match : ShTK (HMM E-Value=7.9e-14) 27 9.1
>SB_54456| Best HMM Match : EGF (HMM E-Value=2.3e-31)
Length = 491
Score = 33.1 bits (72), Expect = 0.14
Identities = 20/60 (33%), Positives = 27/60 (45%)
Frame = +2
Query: 257 GLNFGGHTDVTKTITLVKGVPVPYAVDRPVPYPVEKHXPYPVKVAVPQPYEVVKHVPYHV 436
G+ F V + V VP P V+RPV + + P+PV V +P VPY V
Sbjct: 247 GMPFSNMMAVDAPVHHVDRVPFPVMVNRPVHH--TERIPFPVPFVVNRPIHHTVQVPYPV 304
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 317 PVPYAVDRPVPYPVEKHXPYPVKVAVPQPYEVV 415
PVP+ V+RP+ + V+ PYPV V P ++
Sbjct: 285 PVPFVVNRPIHHTVQ--VPYPVPVRGPSRLVII 315
>SB_15138| Best HMM Match : CLN3 (HMM E-Value=4.4e-05)
Length = 662
Score = 32.3 bits (70), Expect = 0.24
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +2
Query: 287 TKTITLVKGVPVPYAVDRPVPYPVEKHXPYPVKVAVPQPYEVVKHVPYHV 436
++ ITL + +PY V R +PY V + PY V + PY V + +P+ V
Sbjct: 356 SRVITLCRTRVLPYIVTRVLPYIVTRVLPYIVTRVL--PYTVTRVLPFIV 403
Score = 31.9 bits (69), Expect = 0.32
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +2
Query: 284 VTKTITLVKGVPVPYAVDRPVPYPVEKHXPYPVKVAVPQPYEVVKHVPYHV 436
VT+ + + +PY V R +PY V + PY V + PY V + +PY V
Sbjct: 459 VTRVLPYIVTRVLPYIVTRVLPYIVTRVLPYIVTRVL--PYTVTRVLPYIV 507
Score = 31.9 bits (69), Expect = 0.32
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +2
Query: 284 VTKTITLVKGVPVPYAVDRPVPYPVEKHXPYPVKVAVPQPYEVVKHVPYHV 436
VT+ + + +PY V R +PY V + PY V + PY V + +PY V
Sbjct: 467 VTRVLPYIVTRVLPYIVTRVLPYIVTRVLPYTVTRVL--PYIVTRVLPYIV 515
Score = 31.5 bits (68), Expect = 0.42
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +2
Query: 284 VTKTITLVKGVPVPYAVDRPVPYPVEKHXPYPVKVAVPQPYEVVKHVPYHV 436
VT+ + + +PY V R +PY V + PY V + PY V + +PY V
Sbjct: 395 VTRVLPFIVTRVLPYIVTRVLPYIVTRVLPYIVTRVL--PYIVTRVLPYIV 443
Score = 31.1 bits (67), Expect = 0.56
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +2
Query: 284 VTKTITLVKGVPVPYAVDRPVPYPVEKHXPYPVKVAVPQPYEVVKHVPYHV 436
VT+ + + +PY V R +PY V + PY V + PY V + +PY V
Sbjct: 411 VTRVLPYIVTRVLPYIVTRVLPYIVTRVLPYIVTRVL--PYIVTRVLPYIV 459
Score = 31.1 bits (67), Expect = 0.56
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +2
Query: 284 VTKTITLVKGVPVPYAVDRPVPYPVEKHXPYPVKVAVPQPYEVVKHVPYHV 436
VT+ + + +PY V R +PY V + PY V + PY V + +PY V
Sbjct: 427 VTRVLPYIVTRVLPYIVTRVLPYIVTRVLPYIVTRVL--PYIVTRVLPYIV 475
Score = 31.1 bits (67), Expect = 0.56
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +2
Query: 284 VTKTITLVKGVPVPYAVDRPVPYPVEKHXPYPVKVAVPQPYEVVKHVPYHV 436
VT+ + + +PY V R +PY V + PY V + PY V + +PY V
Sbjct: 443 VTRVLPYIVTRVLPYIVTRVLPYIVTRVLPYIVTRVL--PYIVTRVLPYIV 491
Score = 30.7 bits (66), Expect = 0.74
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +2
Query: 284 VTKTITLVKGVPVPYAVDRPVPYPVEKHXPYPVKVAVPQPYEVVKHVPYHV 436
VT + + +PY V R +PY V + PY V + PY V + +PY V
Sbjct: 548 VTMVLPYIVTWVLPYIVTRVLPYIVTRVLPYIVTRVL--PYTVTRVLPYIV 596
Score = 30.3 bits (65), Expect = 0.97
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +2
Query: 284 VTKTITLVKGVPVPYAVDRPVPYPVEKHXPYPVKVAVPQPYEVVKHVPYHV 436
VT+ + + +PY V R +PY V + P+ V + PY V + +PY V
Sbjct: 371 VTRVLPYIVTRVLPYIVTRVLPYTVTRVLPFIVTRVL--PYIVTRVLPYIV 419
Score = 29.1 bits (62), Expect = 2.2
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +2
Query: 284 VTKTITLVKGVPVPYAVDRPVPYPVEKHXPYPVKVAVPQPYEVVKHVPYHV 436
VT + + + +PY V +PY V + PY V + PY V + +PY V
Sbjct: 540 VTSVLPYIVTMVLPYIVTWVLPYIVTRVLPYIVTRVL--PYIVTRVLPYTV 588
Score = 28.3 bits (60), Expect = 3.9
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +2
Query: 284 VTKTITLVKGVPVPYAVDRPVPYPVEKHXPYPVKVAVPQPYEVVKHVPYHV 436
VT+ + +P+ V R +PY V + PY V + PY V + +PY V
Sbjct: 387 VTRVLPYTVTRVLPFIVTRVLPYIVTRVLPYIVTRVL--PYIVTRVLPYIV 435
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 284 VTKTITLVKGVPVPYAVDRPVPYPVEKHXPYPVKVAVP 397
VT+ + + +PY V R +PY V + PY V +P
Sbjct: 564 VTRVLPYIVTRVLPYIVTRVLPYTVTRVLPYIVTRILP 601
>SB_44033| Best HMM Match : SRCR (HMM E-Value=1.3)
Length = 112
Score = 31.1 bits (67), Expect = 0.56
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +2
Query: 317 PVPYAVDRPVPYPVEKHXPYPVKVAVPQPYEVVKHVPY 430
P PY RP PY P+P P PY + PY
Sbjct: 12 PFPYTTRRPFPYTT--RRPFPYTTRRPLPYTTRRPFPY 47
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +2
Query: 317 PVPYAVDRPVPYPVEKHXPYPVKVAVPQPYEVVKHVPY 430
P PY RP PY + PY + P PY PY
Sbjct: 20 PFPYTTRRPFPYTTRRPLPYTTR--RPFPYTTRPPFPY 55
Score = 28.7 bits (61), Expect = 3.0
Identities = 11/38 (28%), Positives = 16/38 (42%)
Frame = +2
Query: 317 PVPYAVDRPVPYPVEKHXPYPVKVAVPQPYEVVKHVPY 430
P P+ P+P P+P P PY + +PY
Sbjct: 2 PTPFRYTTRRPFPYTTRRPFPYTTRRPFPYTTRRPLPY 39
>SB_22238| Best HMM Match : CMAS (HMM E-Value=3.5e-15)
Length = 1605
Score = 30.3 bits (65), Expect = 0.97
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Frame = -1
Query: 505 GIRHLXFDWVWRGNVDGNLNVLLHV-IWHVFDDLVGLGHGYLD--GIRXVLLNWVWNGS- 338
G+ H DWV GN +V+ V + H D VGLGH +D G+ +++WV G
Sbjct: 716 GLDHSVVDWVGLGN-----SVVEWVGLGHSVVDWVGLGHSVVDWVGLGHSVVDWVGLGHS 770
Query: 337 -VDGVRYRDAFDEGDGLG 287
VD V + + GLG
Sbjct: 771 VVDWVGLGHSVVDWVGLG 788
Score = 28.3 bits (60), Expect = 3.9
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 10/83 (12%)
Frame = -1
Query: 505 GIRHLXFDWVWRGNVDGNLNVLLHVI--W----HVFDDLVGLGHGYLD--GIRXVLLNWV 350
G+ H DWV G+ + L H + W H D VGLGH +D G+ +++WV
Sbjct: 746 GLGHSVVDWVGLGHSVVDWVGLGHSVVDWVGLGHSVVDWVGLGHSVVDWVGLGHSVVDWV 805
Query: 349 WNGS--VDGVRYRDAFDEGDGLG 287
G VD V + + GLG
Sbjct: 806 GLGHSVVDWVGLGHSVVDWVGLG 828
>SB_2633| Best HMM Match : Drf_FH1 (HMM E-Value=4)
Length = 179
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +2
Query: 320 VPYAVDRPVPYPVEKHXP--YPVKVAVPQPYEVVKHVP 427
+P V P +P++ H P +P+KV +P + + H+P
Sbjct: 126 LPIKVHLPNEHPIKVHLPNKHPIKVHLPNEHPIKVHLP 163
Score = 29.5 bits (63), Expect = 1.7
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +2
Query: 323 PYAVDRPVPYPVEKHXP--YPVKVAVPQPYEVVKHVP 427
P V P +P++ H P +P+KV +P + + H+P
Sbjct: 13 PIKVHLPNEHPIKVHLPNKHPIKVHLPNKHPIKVHLP 49
Score = 29.5 bits (63), Expect = 1.7
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +2
Query: 323 PYAVDRPVPYPVEKHXP--YPVKVAVPQPYEVVKHVP 427
P V P +P++ H P +P+KV +P + + H+P
Sbjct: 23 PIKVHLPNKHPIKVHLPNKHPIKVHLPNKHPIKVHLP 59
Score = 29.5 bits (63), Expect = 1.7
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +2
Query: 323 PYAVDRPVPYPVEKHXP--YPVKVAVPQPYEVVKHVP 427
P V P +P++ H P +P+KV +P + + H+P
Sbjct: 67 PIKVHLPNKHPIKVHLPNKHPIKVHLPNKHPIKVHLP 103
Score = 29.5 bits (63), Expect = 1.7
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +2
Query: 323 PYAVDRPVPYPVEKHXP--YPVKVAVPQPYEVVKHVP 427
P V P +P++ H P +P+KV +P + + H+P
Sbjct: 77 PIKVHLPNKHPIKVHLPNKHPIKVHLPNEHPIKVHLP 113
Score = 29.5 bits (63), Expect = 1.7
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +2
Query: 323 PYAVDRPVPYPVEKHXP--YPVKVAVPQPYEVVKHVP 427
P V P +P++ H P +P+KV +P + + H+P
Sbjct: 87 PIKVHLPNKHPIKVHLPNEHPIKVHLPNEHPIKVHLP 123
Score = 29.5 bits (63), Expect = 1.7
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +2
Query: 323 PYAVDRPVPYPVEKHXP--YPVKVAVPQPYEVVKHVP 427
P V P +P++ H P +P+KV +P + + H+P
Sbjct: 137 PIKVHLPNKHPIKVHLPNEHPIKVHLPNKHPIKVHLP 173
Score = 28.3 bits (60), Expect = 3.9
Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +2
Query: 323 PYAVDRPVPYPVEKHXP--YPVKVAVPQPYEVVKHVP 427
P V P +P++ H P +P+KV +P + H+P
Sbjct: 97 PIKVHLPNEHPIKVHLPNEHPIKVHLPNKLPIKVHLP 133
Score = 28.3 bits (60), Expect = 3.9
Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +2
Query: 323 PYAVDRPVPYPVEKHXP--YPVKVAVPQPYEVVKHVP 427
P V P +P++ H P P+KV +P + + H+P
Sbjct: 107 PIKVHLPNEHPIKVHLPNKLPIKVHLPNEHPIKVHLP 143
Score = 28.3 bits (60), Expect = 3.9
Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +2
Query: 323 PYAVDRPVPYPVEKHXP--YPVKVAVPQPYEVVKHVP 427
P V P P++ H P +P+KV +P + + H+P
Sbjct: 117 PIKVHLPNKLPIKVHLPNEHPIKVHLPNKHPIKVHLP 153
>SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062)
Length = 406
Score = 29.9 bits (64), Expect = 1.3
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = +2
Query: 320 VPYAVDRPVPYPVEKHXPYPVKVAVPQPYEVVKHVPY 430
+P+ P P+P KH YP P P+ + P+
Sbjct: 157 IPHTSIPPTPHPTYKHPSYPTYNIPPTPHTSIPPTPH 193
>SB_14918| Best HMM Match : Extensin_2 (HMM E-Value=0.35)
Length = 1242
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 6/46 (13%)
Frame = +2
Query: 314 VPVPYAVDRPVPYPVE---KHXPYP---VKVAVPQPYEVVKHVPYH 433
V P+ +D PYP+E P+P +++ P P ++ H P H
Sbjct: 234 VTSPHRMDHKTPYPIEIVDPKSPHPMGTLRLYSPHPMQITDHKPLH 279
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 29.5 bits (63), Expect = 1.7
Identities = 25/73 (34%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Frame = +3
Query: 249 PGTASTSVDIPTSPRPSPSSKASLYLTPSTDPFHTQLRSTXLIPSR*PCPN-PTRSSNTC 425
P T ST + T PS S S+ TPST P ST P+ P+ P+ S
Sbjct: 234 PSTLSTPITPSTPSTPSTPSTPSMPSTPST-PSTPSTPSTPCTPNTPSTPSTPSMPSTPS 292
Query: 426 HIT*RSTXRFPST 464
+ ST PST
Sbjct: 293 TPSTPSTPSTPST 305
Score = 29.5 bits (63), Expect = 1.7
Identities = 25/73 (34%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Frame = +3
Query: 249 PGTASTSVDIPTSPRPSPSSKASLYLTPSTDPFHTQLRSTXLIPSR*PCPN-PTRSSNTC 425
P T ST + T PS S S+ TPST P ST P+ P+ P+ S
Sbjct: 784 PSTLSTPITPSTPSTPSTPSTPSMPSTPST-PSTPSTPSTPCTPNTPSTPSTPSMPSTPS 842
Query: 426 HIT*RSTXRFPST 464
+ ST PST
Sbjct: 843 TPSTPSTPSTPST 855
Score = 28.7 bits (61), Expect = 3.0
Identities = 29/74 (39%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +3
Query: 249 PGTASTSVDIPTSP-RPSPSSKASLYLTPSTDPFHTQLRSTXLIPSR*PCPN-PTRSSNT 422
PGT ST P++P PS S SL TPST P ST PS P+ P+ S
Sbjct: 431 PGTPST----PSTPSTPSTPSTPSLTHTPST-PSTPSTPSTPSTPSTPSTPSTPSTPSTP 485
Query: 423 CHIT*RSTXRFPST 464
+ ST PST
Sbjct: 486 STPSTPSTSSTPST 499
Score = 28.3 bits (60), Expect = 3.9
Identities = 26/73 (35%), Positives = 29/73 (39%), Gaps = 1/73 (1%)
Frame = +3
Query: 249 PGTASTSVDIPTSPRPSPSSKASLYLTPSTDPFHTQLRSTXLIPSR*PCPN-PTRSSNTC 425
P T ST T PS S S TPST P ST PS P+ P+ S
Sbjct: 54 PSTPSTPCTHSTPSAPSTPSTPSTPCTPST-PSTPSTPSTPSTPSTPSAPSTPSTPSTPS 112
Query: 426 HIT*RSTXRFPST 464
+ ST PST
Sbjct: 113 TPSTPSTPSTPST 125
Score = 27.9 bits (59), Expect = 5.2
Identities = 25/75 (33%), Positives = 31/75 (41%), Gaps = 3/75 (4%)
Frame = +3
Query: 249 PGTASTSVDIPTSPRPSPSSKASLYLTPST--DPFHTQLRSTXLIPSR*PCPN-PTRSSN 419
PGT T + T PS S S TPST P + ST +P+ P+ P+ S
Sbjct: 177 PGTPITPSTLSTPSTPSTPSTRSTPSTPSTPSTPSTLSMPSTPSMPNTPSTPSTPSTPST 236
Query: 420 TCHIT*RSTXRFPST 464
ST PST
Sbjct: 237 LSTPITPSTPSTPST 251
Score = 27.9 bits (59), Expect = 5.2
Identities = 28/74 (37%), Positives = 31/74 (41%), Gaps = 2/74 (2%)
Frame = +3
Query: 249 PGTASTSVDIPTSPRPSPSSKASLYLTPSTDPFHTQLRSTXLIPSR*PC-PN-PTRSSNT 422
P T ST + T PS S S TPS P ST PS PC PN P+ S
Sbjct: 228 PSTPSTPSTLSTPITPSTPSTPSTPSTPSM-PSTPSTPSTPSTPST-PCTPNTPSTPSTP 285
Query: 423 CHIT*RSTXRFPST 464
+ ST PST
Sbjct: 286 SMPSTPSTPSTPST 299
Score = 27.9 bits (59), Expect = 5.2
Identities = 27/74 (36%), Positives = 28/74 (37%), Gaps = 2/74 (2%)
Frame = +3
Query: 249 PGTASTSVDIPTSPRPSPSSKASLYLTPST--DPFHTQLRSTXLIPSR*PCPNPTRSSNT 422
P T ST T PS S S TPST P T ST PS P+ NT
Sbjct: 640 PSTPSTPSTRSTPSTPSTPSTPSTPSTPSTPSTPSLTHTPSTPSTPSTPSTPSTPSMPNT 699
Query: 423 CHIT*RSTXRFPST 464
ST PST
Sbjct: 700 PSTP--STPSTPST 711
Score = 27.9 bits (59), Expect = 5.2
Identities = 25/75 (33%), Positives = 31/75 (41%), Gaps = 3/75 (4%)
Frame = +3
Query: 249 PGTASTSVDIPTSPRPSPSSKASLYLTPST--DPFHTQLRSTXLIPSR*PCPN-PTRSSN 419
PGT T + T PS S S TPST P + ST +P+ P+ P+ S
Sbjct: 727 PGTPITPSTLSTPSTPSTPSTRSTPSTPSTPSTPSTLSMPSTPSMPNTPSTPSTPSTPST 786
Query: 420 TCHIT*RSTXRFPST 464
ST PST
Sbjct: 787 LSTPITPSTPSTPST 801
Score = 27.9 bits (59), Expect = 5.2
Identities = 28/74 (37%), Positives = 31/74 (41%), Gaps = 2/74 (2%)
Frame = +3
Query: 249 PGTASTSVDIPTSPRPSPSSKASLYLTPSTDPFHTQLRSTXLIPSR*PC-PN-PTRSSNT 422
P T ST + T PS S S TPS P ST PS PC PN P+ S
Sbjct: 778 PSTPSTPSTLSTPITPSTPSTPSTPSTPSM-PSTPSTPSTPSTPST-PCTPNTPSTPSTP 835
Query: 423 CHIT*RSTXRFPST 464
+ ST PST
Sbjct: 836 SMPSTPSTPSTPST 849
>SB_31795| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1525
Score = 29.5 bits (63), Expect = 1.7
Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = -2
Query: 189 CSQRQDHQYRIHTRGSGDHVCPISSLG-VQLCFLSSSSHWQPLL 61
C + + +R T GS H P L V L S +HWQPLL
Sbjct: 820 CDIQDANIHRQQTSGSKTHRTPFYMLDRVGLPIFSYDNHWQPLL 863
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 29.1 bits (62), Expect = 2.2
Identities = 18/60 (30%), Positives = 25/60 (41%)
Frame = +3
Query: 249 PGTASTSVDIPTSPRPSPSSKASLYLTPSTDPFHTQLRSTXLIPSR*PCPNPTRSSNTCH 428
P + S PT P+P++ TP T T ST P+ P PT+ + T H
Sbjct: 54 PTPTTPSPTAPTQTTPTPATPTPTTPTPKTP---TPTTSTLTKPTPATTPTPTKPTPTAH 110
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = +3
Query: 249 PGTASTSVDIPTSPRPSPSSKASLYLTPSTDPFHTQLRSTXLIPSR*PCPNPTRSSNT 422
P A+ + PT P+P++ TP+T P T+ T P+ P PT + T
Sbjct: 69 PTPATPTPTTPTPKTPTPTTSTLTKPTPATTPTPTKPTPTAHTPT---TPTPTAHTPT 123
>SB_33380| Best HMM Match : Herpes_capsid (HMM E-Value=3)
Length = 474
Score = 29.1 bits (62), Expect = 2.2
Identities = 21/52 (40%), Positives = 24/52 (46%)
Frame = +3
Query: 246 PPGTASTSVDIPTSPRPSPSSKASLYLTPSTDPFHTQLRSTXLIPSR*PCPN 401
PP ASTS+ + S SS AS LT T P T S+ S P PN
Sbjct: 131 PPRPASTSLTTSAAFTSSTSSAASTSLT--TSPVSTSSTSSAASTSLTPAPN 180
>SB_53577| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 79
Score = 28.7 bits (61), Expect = 3.0
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Frame = +3
Query: 249 PGTASTSVDIPTSPRPS---PSSKASLYLTPSTDPFH 350
P + S S D P+S PS PSS +S PS DP H
Sbjct: 22 PSSYSPSPDSPSSYSPSLDSPSSYSSSSYLPSPDPHH 58
>SB_44668| Best HMM Match : 7tm_1 (HMM E-Value=6.1e-05)
Length = 1604
Score = 28.7 bits (61), Expect = 3.0
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 12/66 (18%)
Frame = +2
Query: 275 HTDVTKTITLVKGVPVPYAVDRPVP--------YPVEKHXP----YPVKVAVPQPYEVVK 418
H + + + V +P P ++RPVP P+E+ P P + + +P V
Sbjct: 477 HLPLERPVPAVTRLPTPLPLERPVPAVTHLPTDLPLERPVPAVTRLPTPLLLERPVPAVT 536
Query: 419 HVPYHV 436
H+P H+
Sbjct: 537 HLPAHL 542
Score = 28.3 bits (60), Expect = 3.9
Identities = 13/51 (25%), Positives = 23/51 (45%)
Frame = +2
Query: 275 HTDVTKTITLVKGVPVPYAVDRPVPYPVEKHXPYPVKVAVPQPYEVVKHVP 427
H + + + V +P ++RPVP P P++ VP + H+P
Sbjct: 381 HLPLERPVPAVTRLPTHLPLERPVPAVTRFTTPLPLERPVPAVTRLPTHLP 431
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/54 (24%), Positives = 24/54 (44%)
Frame = +2
Query: 266 FGGHTDVTKTITLVKGVPVPYAVDRPVPYPVEKHXPYPVKVAVPQPYEVVKHVP 427
F + + + + V +P P ++RPVP P++ VP + H+P
Sbjct: 602 FTTYLPLERPVPAVTRLPTPLPLERPVPAVTRLPTHLPLEQPVPAVTSLPTHLP 655
>SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35)
Length = 1118
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = -1
Query: 502 IRHLXFDWVWRGNVDGNLNVLLHVIWHVFDDLVG--LGHGYLDGIRXVLLNW 353
I + DW W + G ++L V W + + + HG L+ R VL+ +
Sbjct: 793 IAYFIRDWRWYMRISGLPSILFLVFWRLLPETPRWLIAHGRLEEARDVLIKY 844
>SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23)
Length = 2123
Score = 28.7 bits (61), Expect = 3.0
Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 258 ASTSV-DIPTSPRPSPSSKASLYLTPSTDPFHTQLRSTXLIPSR 386
A SV IP+ RPS + S LTPST +RST + SR
Sbjct: 1697 AKNSVHSIPSPSRPSLNIAPSSTLTPSTAGHTIDIRSTNRVHSR 1740
>SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1069
Score = 28.3 bits (60), Expect = 3.9
Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +3
Query: 252 GTASTSVDIPTSPRPSPSSKASLYLTPS--TDPFHTQLRSTXLIPSR*PCPNPTRSS 416
GT S PTS + SP+S +S TP+ TD ST S NPT SS
Sbjct: 102 GTQQPSPASPTSIKQSPNSSSSTGQTPTEKTDSTPKSSGSTLPTSSTPATQNPTDSS 158
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 28.3 bits (60), Expect = 3.9
Identities = 13/41 (31%), Positives = 16/41 (39%)
Frame = +2
Query: 323 PYAVDRPVPYPVEKHXPYPVKVAVPQPYEVVKHVPYHVKEY 445
PY PYP + PYP + P P + PY Y
Sbjct: 139 PYPPSPNAPYPPPPNPPYPPPLYPPPPNPPPPNAPYPPPPY 179
>SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 27.9 bits (59), Expect = 5.2
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +3
Query: 285 SPRPSPSSKASLYLTPSTDPFHTQLRSTXLIPSR*PCPNP 404
SP PSP+ + PS++P + PS P PNP
Sbjct: 488 SPNPSPNPSSDPSPNPSSNPSSDPSPNPSSNPSSEPSPNP 527
Score = 27.9 bits (59), Expect = 5.2
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Frame = +3
Query: 246 PPGTASTSVDIPTSPRPSPSSKASLYLTPSTDPFHTQLRSTXLIPSR*PCP----NPTRS 413
P S++ SP PS + + PS+DP + S+ PS P P NP R+
Sbjct: 547 PSPHPSSNPSSEPSPNPSSNPSSDPSPNPSSDPSLSFSPSSSSSPSVRPSPNLISNPNRN 606
Query: 414 SNT 422
SN+
Sbjct: 607 SNS 609
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +3
Query: 249 PGTASTSVDIPTS-PRPSPSSKASLYLTPSTDPFHTQLRSTXLIPSR*PCPNPTRSSNT 422
P +++ + P+ P PSP ++ PS +P + PS P PNP+ + ++
Sbjct: 463 PSISTSPISNPSPRPHPSPHPSSNPSPNPSPNPSSDPSPNPSSNPSSDPSPNPSSNPSS 521
>SB_43367| Best HMM Match : SAM_1 (HMM E-Value=0.085)
Length = 325
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +2
Query: 314 VPVPYAVDRPVPYPVEKH-XPYPVKVAVPQPY-EVVKHVPYH 433
+PVP PVP P + + P P K P+ E++K + YH
Sbjct: 123 LPVPTMAPTPVPRPSDTNPPPLPAKRFKPKSVEELLKRIGYH 164
>SB_59417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1822
Score = 27.9 bits (59), Expect = 5.2
Identities = 23/59 (38%), Positives = 30/59 (50%)
Frame = +3
Query: 282 TSPRPSPSSKASLYLTPSTDPFHTQLRSTXLIPSR*PCPNPTRSSNTCHIT*RSTXRFP 458
T P PSP + SLY ST T++R T +PS P + +R S H+T ST P
Sbjct: 137 TYPPPSPRAHQSLY---STVVLVTKVRLT--LPS--PRAHQSRYSTVVHVTKGSTITAP 188
>SB_15490| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 302
Score = 27.9 bits (59), Expect = 5.2
Identities = 30/85 (35%), Positives = 38/85 (44%), Gaps = 9/85 (10%)
Frame = +3
Query: 279 PTSPRP-SP-SSKASLYLTPSTDPFHTQLRSTXLIPSR*PCP------NPTRSSNTCHIT 434
PT P SP SS +S + + PFHT R IP P P +P +S T
Sbjct: 52 PTPPEGISPLSSSSSASSSSAASPFHTIPRDEFGIPLEFPSPPSLSTLSPLAASPPVS-T 110
Query: 435 *RSTXRFPSTF-PRHTQSKXRCLIP 506
R R PS+F PR + S+ R P
Sbjct: 111 PRQQRRTPSSFTPRSSISRRRSDTP 135
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 27.9 bits (59), Expect = 5.2
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = +3
Query: 249 PGTAST--SVDIPTSPRPSPSSKASLYLTPSTDPFHTQLRSTXLIPSR*PCPNPT 407
P T++T D+ P SP++ A TPS P T+ T + P +P+
Sbjct: 262 PETSTTLKPTDVTEKPEASPATPAEYSTTPSVQPELTEAPQTDYPTTASPATSPS 316
>SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1417
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +3
Query: 279 PTSPRPSPSSKASLYLTPSTDPFHTQLRSTXLIPSR*PCPNPT 407
P P PS +S + +PST+P +T P + P P+ T
Sbjct: 1263 PIKPSPSTTSTTPIKPSPSTNPIKPSPSTTSTTPIK-PSPSTT 1304
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +3
Query: 279 PTSPRPSPSSKASLYLTPSTDPFHTQLRSTXLIPSR*PCPNPTRSS 416
P P PS +S + +PST P +T + PS P P + S
Sbjct: 1284 PIKPSPSTTSTTPIKPSPSTTPIKPSPSTTPIKPS--PSTTPIKPS 1327
>SB_7375| Best HMM Match : RVT_1 (HMM E-Value=7.6e-19)
Length = 544
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +2
Query: 323 PYAVDRPVPYPVEKHXPYPVKVAVPQP 403
PY R PYP + PYP + P P
Sbjct: 190 PYPGRRGAPYPGRRGAPYPGRRGAPYP 216
>SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74)
Length = 483
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 365 HXPYPVKVAVPQPYEVVKHVPYHVK 439
H P+PV+V V P+ V VP V+
Sbjct: 212 HHPFPVRVPVRVPFRVPVRVPVPVR 236
>SB_50147| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
Frame = +3
Query: 246 PPGTAS--TSVDIPTSPRPSPSSKA 314
PP TAS T+ PT+PR +PS+ A
Sbjct: 357 PPNTASPSTTKTTPTTPRTTPSASA 381
>SB_35845| Best HMM Match : ShTK (HMM E-Value=7.9e-14)
Length = 330
Score = 27.1 bits (57), Expect = 9.1
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 341 PVPYPVEKHXPYPVKVAVP 397
P PYPVE PY +V +P
Sbjct: 256 PYPYPVEALHPYQYRVVLP 274
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,438,499
Number of Sequences: 59808
Number of extensions: 276831
Number of successful extensions: 1323
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 949
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1221
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1136110413
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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