Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0243
         (514 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   1.4  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   4.3  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   4.3  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   7.5  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   9.9  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    21   9.9  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +3

Query: 255 TASTSVDIPTSPRPSPSSKASLYLT 329
           +A+ +    TSPRP+ S+ A+L L+
Sbjct: 831 SAAATSSTSTSPRPASSTAATLVLS 855


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 5/16 (31%), Positives = 10/16 (62%)
 Frame = -1

Query: 355 WVWNGSVDGVRYRDAF 308
           W WN ++  + ++D F
Sbjct: 659 WAWNFTIPNMYFKDVF 674


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 5/16 (31%), Positives = 10/16 (62%)
 Frame = -1

Query: 355 WVWNGSVDGVRYRDAF 308
           W WN ++  + ++D F
Sbjct: 659 WAWNFTIPNMYFKDVF 674


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -2

Query: 93  LSSSSHWQPLLLPAG 49
           LS  S+W+ LLL AG
Sbjct: 87  LSEVSNWKVLLLEAG 101


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 5/14 (35%), Positives = 12/14 (85%)
 Frame = +2

Query: 305 VKGVPVPYAVDRPV 346
           ++G+P PY +++P+
Sbjct: 487 IQGLPPPYRLNKPL 500


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
          opsin protein.
          Length = 371

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 90 SSSSHWQPLLLPAG 49
          + S HW+   LPAG
Sbjct: 3  NDSIHWEARYLPAG 16


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,139
Number of Sequences: 438
Number of extensions: 2658
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14232156
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)