Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0242
(743 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 120 2e-28
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 100 3e-22
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 95 1e-20
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 74 2e-14
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 71 2e-13
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 63 5e-11
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 62 6e-11
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 62 1e-10
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 60 2e-10
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 54 3e-08
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 51 2e-07
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 50 3e-07
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 50 5e-07
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 44 2e-05
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 44 2e-05
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 43 4e-05
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 40 3e-04
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 39 9e-04
SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase Abc... 31 0.23
SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy... 30 0.30
SPCC645.13 |||transcription elongation regulator|Schizosaccharom... 30 0.40
SPBC9B6.10 |cdc37||Hsp90 co-chaperone Cdc37|Schizosaccharomyces ... 29 0.70
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 28 1.6
SPAC3H1.01c |orp3|orc3, SPAP14E8.06c|origin recognition complex ... 27 2.8
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 26 4.9
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 26 4.9
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 26 4.9
SPAC30C2.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 8.6
SPAC4G8.06c |trm12||tRNA methyltransferase Trm12 |Schizosaccharo... 25 8.6
SPBC32H8.02c |nep2|mug120|nedd8 protease Nep2|Schizosaccharomyce... 25 8.6
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 120 bits (289), Expect = 2e-28
Identities = 49/89 (55%), Positives = 74/89 (83%)
Frame = +2
Query: 257 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCD 436
AGQERF TITT+YYRGAMGI+L+YD+T++K+FD++ W N+++HA+E+V K+++GNKCD
Sbjct: 66 AGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKCD 125
Query: 437 MEEKRVVSKERGEAIAREHGIRFMRRRLK 523
E++R VS E+G+A+A E G++F+ K
Sbjct: 126 CEDQRQVSFEQGQALADELGVKFLEASAK 154
Score = 106 bits (254), Expect = 4e-24
Identities = 47/68 (69%), Positives = 59/68 (86%)
Frame = +3
Query: 63 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKL 242
M+ K+YD L KLLLIGDSGVGK+C+L RFS++ FT +FI+TIGIDFKI+T+EL GK+IKL
Sbjct: 1 MSTKSYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKL 60
Query: 243 QIWDLLGR 266
QIWD G+
Sbjct: 61 QIWDTAGQ 68
Score = 28.3 bits (60), Expect = 1.2
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1
Query: 508 ETSAKANINIDRAFSELAEAI 570
E SAK N+N+D AF LA I
Sbjct: 150 EASAKTNVNVDEAFFTLAREI 170
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 100 bits (239), Expect = 3e-22
Identities = 43/63 (68%), Positives = 54/63 (85%)
Frame = +3
Query: 78 YDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDL 257
YD LFKLLLIGDSGVGK+C+L RF+D+ +T ++ISTIG+DFKI+T EL GK +KLQIWD
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDT 64
Query: 258 LGR 266
G+
Sbjct: 65 AGQ 67
Score = 92.7 bits (220), Expect = 5e-20
Identities = 41/89 (46%), Positives = 62/89 (69%)
Frame = +2
Query: 257 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCD 436
AGQERF TIT+SYYRGA GI++VYD+T++ +F+++ +WL+ ID +A E V ++++GNK D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKSD 124
Query: 437 MEEKRVVSKERGEAIAREHGIRFMRRRLK 523
M +K+VV + A I F+ K
Sbjct: 125 MVDKKVVEYSVAKEFADSLNIPFLETSAK 153
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 94.7 bits (225), Expect = 1e-20
Identities = 40/91 (43%), Positives = 63/91 (69%)
Frame = +2
Query: 236 KAPDMGPAGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKM 415
KA AGQER+ IT++YYRGA+G ++VYDIT + +FD++ +WL+ + EHA+ ++ M
Sbjct: 60 KAQIWDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIM 119
Query: 416 ILGNKCDMEEKRVVSKERGEAIAREHGIRFM 508
++GNK D+ R VS E +A A E+ + F+
Sbjct: 120 LVGNKTDLLHLRAVSTEEAQAFAAENNLSFI 150
Score = 73.7 bits (173), Expect = 2e-14
Identities = 34/63 (53%), Positives = 43/63 (68%)
Frame = +3
Query: 78 YDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDL 257
YD LFK +LIGDSGVGK+ +L RF+ N F STIG++F + + L KKIK QIWD
Sbjct: 7 YDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDT 66
Query: 258 LGR 266
G+
Sbjct: 67 AGQ 69
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 73.7 bits (173), Expect = 2e-14
Identities = 35/89 (39%), Positives = 54/89 (60%)
Frame = +2
Query: 257 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCD 436
AGQERF ++ SY R + ++VYDITN +F + KW+ ++ +DV +++GNK D
Sbjct: 68 AGQERFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIEDVRAERGDDVIIVLVGNKTD 127
Query: 437 MEEKRVVSKERGEAIAREHGIRFMRRRLK 523
+ +KR V++E GE A+E I M K
Sbjct: 128 LADKRQVTQEEGEKKAKELKIMHMETSAK 156
Score = 62.1 bits (144), Expect = 8e-11
Identities = 26/59 (44%), Positives = 40/59 (67%)
Frame = +3
Query: 90 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDLLGR 266
FKL+ +G+ VGKT ++ RF + F T+ +TIGIDF KT+ L + ++LQ+WD G+
Sbjct: 12 FKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 70
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 70.9 bits (166), Expect = 2e-13
Identities = 31/81 (38%), Positives = 50/81 (61%)
Frame = +2
Query: 257 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCD 436
AGQE+F ++ +YYRGA G +LVYD+TN+ +F+++ WL +I A + ++ G+K D
Sbjct: 70 AGQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEELSSWLSDIRAMAPSTICVVLAGSKSD 129
Query: 437 MEEKRVVSKERGEAIAREHGI 499
++ +R VS E E I
Sbjct: 130 LQNQRQVSTEEAAEFCSEKHI 150
Score = 63.7 bits (148), Expect = 3e-11
Identities = 31/72 (43%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Frame = +3
Query: 63 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVEL----RGK 230
M K++YD L K++L G SG GK+C+L RF N + T+GIDF + + + + K
Sbjct: 1 MDKESYDYLVKIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQK 60
Query: 231 KIKLQIWDLLGR 266
+IKLQIWD G+
Sbjct: 61 RIKLQIWDTAGQ 72
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 62.9 bits (146), Expect = 5e-11
Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Frame = +2
Query: 257 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCD 436
AGQER+ ++ YYR A ++VYDIT + + W++ + A E + + GNK D
Sbjct: 72 AGQERYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEGIVIALAGNKLD 131
Query: 437 M-EEKRVVSKERGEAIAREHGIRFMRRRLK 523
+ +E+R V K EA A E + F K
Sbjct: 132 LAQERRAVEKADAEAYAAEANLLFFETSAK 161
Score = 48.4 bits (110), Expect = 1e-06
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Frame = +3
Query: 93 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVEL-RGKKIKLQIWDLLGR 266
KL+L+GDS VGK+ ++ RF + F STIG F +T+ + +KL+IWD G+
Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQ 74
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 62.5 bits (145), Expect = 6e-11
Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Frame = +2
Query: 257 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMIL-GNKC 433
AGQE + + Y R G +LVY+IT+ +FD+I + + I ++D ++L NKC
Sbjct: 64 AGQEEYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLVANKC 123
Query: 434 DMEEKRVVSKERGEAIAR 487
D+E +RVVS+ GE +A+
Sbjct: 124 DLEAERVVSRAEGEQLAK 141
Score = 41.5 bits (93), Expect = 1e-04
Identities = 21/75 (28%), Positives = 39/75 (52%)
Frame = +3
Query: 69 KKTYDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQI 248
+ TY +KL+++GD GVGK+ + + +HF + TI ++ K E+ G+ L +
Sbjct: 2 RSTYLREYKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYR-KKCEIDGEGALLDV 60
Query: 249 WDLLGRSVSTPSRRR 293
D G+ + R +
Sbjct: 61 LDTAGQEEYSAMREQ 75
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 61.7 bits (143), Expect = 1e-10
Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 5/85 (5%)
Frame = +2
Query: 257 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKW----LRNIDEHANEDVEKMILG 424
AGQERF ++ ++YRGA +LVYD+ N K+F+ + W L E ++LG
Sbjct: 65 AGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFPFILLG 124
Query: 425 NKCDMEE-KRVVSKERGEAIAREHG 496
NK D+EE KR+VSK + A + G
Sbjct: 125 NKVDVEEQKRMVSKSKALAFCQARG 149
Score = 56.0 bits (129), Expect = 5e-09
Identities = 28/68 (41%), Positives = 44/68 (64%)
Frame = +3
Query: 63 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKL 242
MA K LL K++++G+SGVGKT I+ ++ + F+ + +TIG DF K V + K + L
Sbjct: 1 MAGKKKHLL-KVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTL 59
Query: 243 QIWDLLGR 266
Q+WD G+
Sbjct: 60 QLWDTAGQ 67
Score = 29.5 bits (63), Expect = 0.53
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +1
Query: 487 RARHPLHETSAKANINIDRAFSELAEAILDKTAGREADAD 606
R P ETSAK IN+ AF +A+ L+ + AD
Sbjct: 148 RGEIPYFETSAKEAINVQEAFETVAKLALENMDSDDIAAD 187
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 60.5 bits (140), Expect = 2e-10
Identities = 25/61 (40%), Positives = 41/61 (67%)
Frame = +3
Query: 84 LLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDLLG 263
+ K++++GDSGVGKTC++ +F + F+ + +TIG DF K V + K + LQ+WD G
Sbjct: 7 VFLKVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAG 66
Query: 264 R 266
+
Sbjct: 67 Q 67
Score = 53.2 bits (122), Expect = 4e-08
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 5/85 (5%)
Frame = +2
Query: 257 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANED---VEKMILGN 427
AGQERF ++ ++YRGA ++VY++ N K+FD + W + ++D +I+GN
Sbjct: 65 AGQERFQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTSQDECAFPFIIVGN 124
Query: 428 KCDME-EKRVVSKERG-EAIAREHG 496
+ D + KR VS R + +HG
Sbjct: 125 QIDKDASKRAVSLHRALDYCKSKHG 149
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 53.6 bits (123), Expect = 3e-08
Identities = 31/98 (31%), Positives = 57/98 (58%), Gaps = 2/98 (2%)
Frame = +2
Query: 203 NKDSGIKG*ENKAPDMGPAGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRN- 379
+K+ KG E + AGQ+ + + + + G G +LVY IT++ +F ++VK +R+
Sbjct: 44 SKNIKYKGQEFATEIIDTAGQDEYSILNSKHSIGIHGYVLVYSITSKSSF-EMVKIVRDK 102
Query: 380 -IDEHANEDVEKMILGNKCDMEEKRVVSKERGEAIARE 490
++ E V +++GNK D+ +R V+ E G+A+A E
Sbjct: 103 ILNHTGTEWVPIVVVGNKSDLHMQRAVTAEEGKALANE 140
Score = 35.9 bits (79), Expect = 0.006
Identities = 15/58 (25%), Positives = 33/58 (56%)
Frame = +3
Query: 93 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDLLGR 266
++ ++G VGK+ + ++ +NHF ++ TI F K ++ +G++ +I D G+
Sbjct: 8 RIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTFS-KNIKYKGQEFATEIIDTAGQ 64
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 51.2 bits (117), Expect = 2e-07
Identities = 23/64 (35%), Positives = 39/64 (60%)
Frame = +3
Query: 75 TYDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWD 254
T +L KL+++GD GKTC+L FS F ++ T+ ++ + VE+ G+ I+L +WD
Sbjct: 2 TTELRRKLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENY-VADVEVDGRHIELALWD 60
Query: 255 LLGR 266
G+
Sbjct: 61 TAGQ 64
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 50.4 bits (115), Expect = 3e-07
Identities = 21/62 (33%), Positives = 36/62 (58%)
Frame = +3
Query: 81 DLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDLL 260
++ K+ +IGDS +GKT ++ + F T+G++F KT+ +R +I IWDL
Sbjct: 8 NVTIKVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDLG 67
Query: 261 GR 266
G+
Sbjct: 68 GQ 69
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 49.6 bits (113), Expect = 5e-07
Identities = 21/62 (33%), Positives = 38/62 (61%)
Frame = +3
Query: 81 DLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDLL 260
+L KL+++GD GKTC+L FS F ++ T+ ++ + VE+ G+ ++L +WD
Sbjct: 4 ELRRKLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENY-VADVEVDGRHVELALWDTA 62
Query: 261 GR 266
G+
Sbjct: 63 GQ 64
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 44.4 bits (100), Expect = 2e-05
Identities = 22/70 (31%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Frame = +2
Query: 257 AGQERFHTITTSYY-RGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKC 433
AGQE+ + YY +G GI++ +D+T+ T+ ++ W R++ E++ ++ GNK
Sbjct: 66 AGQEKLGGLRDGYYIQGQCGIIM-FDVTSRITYKNVPHWWRDL-VRVCENIPIVLCGNKV 123
Query: 434 DMEEKRVVSK 463
D++E++V +K
Sbjct: 124 DVKERKVKAK 133
Score = 42.3 bits (95), Expect = 7e-05
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +3
Query: 90 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDLLGR 266
FKL+L+GD G GKT + R F +I+T+G++ +I +WD G+
Sbjct: 10 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQ 68
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 44.0 bits (99), Expect = 2e-05
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 93 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIK-TVELRGKKIKLQIWDLLGR 266
KL+++GD G GKTC+L FS F ++ T+ ++ T K I+L +WD G+
Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQ 74
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 43.2 bits (97), Expect = 4e-05
Identities = 18/58 (31%), Positives = 35/58 (60%)
Frame = +3
Query: 93 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDLLGR 266
KL+++GD GKT +L F+ +F T ++ T+ ++ + + GK ++L +WD G+
Sbjct: 10 KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENY-VSDCRVDGKSVQLALWDTAGQ 66
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 40.3 bits (90), Expect = 3e-04
Identities = 17/58 (29%), Positives = 35/58 (60%)
Frame = +3
Query: 93 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDLLGR 266
K +++GD VGKTC+L ++ N F + ++ T+ ++ + TV + + L ++D G+
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNYAV-TVMIGDEPYTLGLFDTAGQ 61
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 38.7 bits (86), Expect = 9e-04
Identities = 18/58 (31%), Positives = 33/58 (56%)
Frame = +3
Query: 93 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDLLGR 266
K++++GD GKT +L F+ +F + TI ++ I + + G I+L +WD G+
Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENY-IHDIFVDGNSIELSLWDTAGQ 71
>SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase
Abc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1463
Score = 30.7 bits (66), Expect = 0.23
Identities = 18/67 (26%), Positives = 33/67 (49%)
Frame = +2
Query: 323 VYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCDMEEKRVVSKERGEAIAREHGIR 502
VY ++ DDI L +D+H N D+ + +LG+K + + V+ + +E +
Sbjct: 720 VYSRSDIYLLDDI---LSAVDQHVNRDLVRNLLGSKGLLRSRCVILSTNSLTVLKEASMI 776
Query: 503 FMRRRLK 523
+M R K
Sbjct: 777 YMLRNGK 783
>SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1201
Score = 30.3 bits (65), Expect = 0.30
Identities = 22/58 (37%), Positives = 30/58 (51%)
Frame = -3
Query: 474 SPRSLLTTRFSSISHLLPSIIFSTSSFACSSIFRNHLTISSNVFSFVMSYTSMMPIAP 301
SPRSLLT FS PSIIF + S+F +H +S F++ S+ P+ P
Sbjct: 750 SPRSLLTKIFSEARKNAPSIIFINNVEKWPSLF-SHSFLS----MFLLLLDSISPLEP 802
>SPCC645.13 |||transcription elongation
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 721
Score = 29.9 bits (64), Expect = 0.40
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 383 DEHANEDVEKMILGNKCDMEEKRVVSKERGEAIAREHG 496
+EH D+ GN+ + EE VVS + EAI +E G
Sbjct: 84 EEHQTADLLASNEGNEKNNEENNVVSSDSKEAITKESG 121
>SPBC9B6.10 |cdc37||Hsp90 co-chaperone Cdc37|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 29.1 bits (62), Expect = 0.70
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +2
Query: 377 NIDEHANEDVEKMILGNKCDMEEKRVVSKERGEAIAREHGIRFMRRRL 520
+I+ H N D + I + D+ EKR V K++ E I G M RRL
Sbjct: 18 DIEVHPNVDKKSFIRWRQRDIHEKRAVRKQKMEDI---KGAMAMNRRL 62
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 27.9 bits (59), Expect = 1.6
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Frame = +3
Query: 90 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGID-----FKIKTVELRGKKIKLQ 245
F L+L G+SG+GKT F + F+TT S +G + KTVE+ K +L+
Sbjct: 29 FTLMLCGESGLGKT----TFCNTLFSTTIKSHMGPEKVRAKHAEKTVEIEITKAELE 81
>SPAC3H1.01c |orp3|orc3, SPAP14E8.06c|origin recognition complex
subunit Orp3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 27.1 bits (57), Expect = 2.8
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 329 DITNEKTFDDIVKWLRNIDEHANEDVEK 412
+IT T+D + LR + EHA+E V++
Sbjct: 63 EITTHTTYDSNARVLRQLCEHASEPVDE 90
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 26.2 bits (55), Expect = 4.9
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +3
Query: 99 LLIGDSGVGKTCIL 140
+L+GD+ GKTCIL
Sbjct: 1873 ILVGDTATGKTCIL 1886
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 26.2 bits (55), Expect = 4.9
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -3
Query: 546 SSVYIYVRFSRRLMKRMPCSRAIASPRSLLTTRFSSISHLLPSI 415
SS + + R+ RR PCS A +SP + T FS + P +
Sbjct: 377 SSDFAHFRYQRRSRPVSPCSTAPSSP-TFSTRSFSPTPDVTPLV 419
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 26.2 bits (55), Expect = 4.9
Identities = 21/54 (38%), Positives = 26/54 (48%)
Frame = -3
Query: 489 SRAIASPRSLLTTRFSSISHLLPSIIFSTSSFACSSIFRNHLTISSNVFSFVMS 328
S ASP S T S+ S L S ++SS A SSI + L SS S + S
Sbjct: 98 STTSASPTSSSLTSSSATSSSLASSSTTSSSLASSSITSSSLASSSITSSSLAS 151
>SPAC30C2.07 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 25.4 bits (53), Expect = 8.6
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 60 KMAKKTYDLLFKLLLIGDSGVGKTCILFRFSDNH 161
K + T D+ F+L+L+ D G K +L F NH
Sbjct: 30 KQYQSTKDVTFRLVLVQDIGDRKKTVL--FDSNH 61
>SPAC4G8.06c |trm12||tRNA methyltransferase Trm12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 418
Score = 25.4 bits (53), Expect = 8.6
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +1
Query: 55 FVKWPKKHTTCYSNCFSSVTPELEKRAY 138
F K K+T C +NC S +P + Y
Sbjct: 386 FSKMLAKNTVCVTNCVKSFSPRVSHIVY 413
>SPBC32H8.02c |nep2|mug120|nedd8 protease Nep2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 415
Score = 25.4 bits (53), Expect = 8.6
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -2
Query: 277 VETLLPSRSHIWSFIFLPLNST 212
+E+ LP SFIFLP+N T
Sbjct: 140 IESALPPAMFDASFIFLPINDT 161
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,972,872
Number of Sequences: 5004
Number of extensions: 63059
Number of successful extensions: 224
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 221
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 353266144
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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