Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0242
         (743 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            71   5e-14
AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...    39   2e-04
DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.       26   1.4  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   10.0 
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    23   10.0 
AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.         23   10.0 
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    23   10.0 

>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 70.5 bits (165), Expect = 5e-14
 Identities = 31/89 (34%), Positives = 49/89 (55%)
 Frame = +2

Query: 257 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCD 436
           AGQER+H++   YYRGA   ++VYDI N  +F     W++ +   A+ ++   + GNK D
Sbjct: 81  AGQERYHSLAPMYYRGAQAAIVVYDIQNSDSFARAKTWVKELQRQASPNIVIALAGNKAD 140

Query: 437 MEEKRVVSKERGEAIAREHGIRFMRRRLK 523
           +   RVV  E  +  A ++ + FM    K
Sbjct: 141 LANSRVVDYEEAKQYADDNRLLFMETSAK 169



 Score = 48.4 bits (110), Expect = 2e-07
 Identities = 23/59 (38%), Positives = 35/59 (59%)
 Frame = +3

Query: 90  FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDLLGR 266
           FKL+L+G+S VGK+ ++ RF    F     STIG  F  +T+ +    +K +IWD  G+
Sbjct: 25  FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTTVKFEIWDTAGQ 83


>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score = 38.7 bits (86), Expect = 2e-04
 Identities = 17/58 (29%), Positives = 33/58 (56%)
 Frame = +3

Query: 93  KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDLLGR 266
           K +++GD  VGKTC+L  ++ + F   ++ T   ++    V + G ++ L +WD  G+
Sbjct: 8   KCVVVGDGTVGKTCMLISYTTDSFPGEYVPTSFDNYSAPMV-VDGVQVSLGLWDTAGQ 64


>DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.
          Length = 410

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 9/25 (36%), Positives = 19/25 (76%)
 Frame = -2

Query: 265 LPSRSHIWSFIFLPLNSTVFILKSI 191
           +P R ++  +IF+P+NST  +++S+
Sbjct: 175 VPYRQNVTMYIFMPMNSTRQLVQSM 199


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.0 bits (47), Expect = 10.0
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = -2

Query: 430  FIAKYHLFHILVCMLVYIS*PFNDIIKCFFI 338
            FI  ++LF  +V +L  +    +DII+ +F+
Sbjct: 1682 FIEPWNLFDFVVVILSILGLVLSDIIEKYFV 1712


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 23.0 bits (47), Expect = 10.0
 Identities = 8/30 (26%), Positives = 15/30 (50%)
 Frame = -1

Query: 470 RAPC*QHVSPPYHIYCQVSSFPHPRLHARL 381
           +  C Q +      +C + +F HPR H ++
Sbjct: 39  KTTCSQCIQTTNCRWCTMPNFTHPRCHGQI 68


>AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.
          Length = 93

 Score = 23.0 bits (47), Expect = 10.0
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = -2

Query: 607 GRRLPRAPPSCRV*PPLVPRKLCLYLCSL 521
           GRR PR P SC    P    +LC+   SL
Sbjct: 23  GRRWPRPPTSCW---PSRRSRLCIIALSL 48


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.0 bits (47), Expect = 10.0
 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
 Frame = -3

Query: 525 RFSRRLMKRMPCSRAIASPRSLLTTRFSS---ISHLLP 421
           R  RRL++R+    AIA  R+  T R+ +   ++ LLP
Sbjct: 821 RECRRLLERVQRKSAIAVARTFRTVRYETAVLLAGLLP 858


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 750,051
Number of Sequences: 2352
Number of extensions: 14372
Number of successful extensions: 37
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76507752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)