Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0242
(743 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family prot... 155 2e-38
AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family pr... 135 4e-32
AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein. 135 4e-32
U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like prot... 122 3e-28
U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein. 115 4e-26
U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated p... 105 4e-23
AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family pr... 103 1e-22
U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein. 101 4e-22
U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein. 101 4e-22
U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family pro... 101 4e-22
U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family pro... 101 4e-22
AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein. 101 4e-22
U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein. 101 7e-22
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 93 1e-19
U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein. 91 6e-19
Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical pr... 87 2e-17
AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical ... 86 3e-17
Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical pr... 85 4e-17
U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical pr... 85 5e-17
Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical pr... 85 7e-17
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 85 7e-17
AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family pr... 84 9e-17
AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family pr... 83 2e-16
AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein. 83 2e-16
Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical pr... 81 6e-16
Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical pr... 80 1e-15
AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical ... 80 2e-15
AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein. 80 2e-15
U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like prot... 79 3e-15
U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical pr... 77 1e-14
U68260-1|AAB16975.1| 69|Caenorhabditis elegans rab19-like prot... 77 2e-14
Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical pr... 76 2e-14
AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family pr... 76 2e-14
AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical ... 75 7e-14
U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family prot... 74 1e-13
Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical pr... 72 4e-13
U68259-1|AAB16974.1| 69|Caenorhabditis elegans rab14-like prot... 72 5e-13
Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical pr... 71 7e-13
U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein. 71 7e-13
Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical pr... 70 2e-12
U68262-1|AAB16977.1| 74|Caenorhabditis elegans RAM1-like protein. 69 5e-12
AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical ... 69 5e-12
AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical ... 64 8e-11
Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical pr... 63 2e-10
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 63 2e-10
Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical p... 60 2e-09
DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GL... 60 2e-09
U68253-1|AAB16968.1| 65|Caenorhabditis elegans rab6-like protein. 59 3e-09
Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical p... 58 5e-09
Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical pr... 58 9e-09
U68254-1|AAB16969.1| 67|Caenorhabditis elegans rab6-like protein. 58 9e-09
AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical ... 56 2e-08
U68264-1|AAB16979.1| 66|Caenorhabditis elegans S10-like protein. 56 4e-08
Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical pr... 52 4e-07
U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding pro... 52 4e-07
U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding pro... 52 4e-07
U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog ... 52 4e-07
L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleot... 52 4e-07
CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical ... 52 4e-07
AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical ... 52 4e-07
AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-rela... 52 4e-07
U68261-1|AAB16976.1| 53|Caenorhabditis elegans rab19-like prot... 51 8e-07
Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical p... 50 1e-06
Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical pr... 48 5e-06
M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein pro... 48 5e-06
CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical ... 48 9e-06
Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical pr... 46 2e-05
U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein. 46 2e-05
Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical pr... 46 3e-05
X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-relat... 46 4e-05
L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein pr... 46 4e-05
L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein pr... 46 4e-05
AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse e... 46 4e-05
AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death a... 46 4e-05
AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death a... 46 4e-05
Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical pr... 45 5e-05
Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical pr... 45 5e-05
U28733-4|AAA68305.2| 125|Caenorhabditis elegans Di-ras/rig/noey... 43 2e-04
U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical p... 43 2e-04
L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine nucleot... 43 2e-04
AF067623-4|AAC17556.2| 393|Caenorhabditis elegans Hypothetical ... 43 3e-04
Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical pr... 42 3e-04
U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase... 42 3e-04
S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog p... 42 6e-04
AC024853-3|ABP57809.1| 244|Caenorhabditis elegans Hypothetical ... 42 6e-04
Z71180-2|CAA94890.1| 207|Caenorhabditis elegans Hypothetical pr... 39 0.003
U66216-1|AAB07465.1| 128|Caenorhabditis elegans RAN/Tc4 protein. 39 0.004
U68263-1|AAB16978.1| 115|Caenorhabditis elegans rab-like protein. 38 0.006
U50301-3|AAM29676.1| 370|Caenorhabditis elegans Hypothetical pr... 37 0.013
U97592-7|AAB52874.2| 332|Caenorhabditis elegans Sperm-specific ... 36 0.023
U68255-1|AAB16970.1| 70|Caenorhabditis elegans rab7-like protein. 36 0.023
AL117204-37|CAB55148.2| 248|Caenorhabditis elegans Hypothetical... 35 0.053
AF098999-2|AAC68728.3| 369|Caenorhabditis elegans Hypothetical ... 35 0.053
Z66561-1|CAA91454.1| 635|Caenorhabditis elegans Hypothetical pr... 33 0.21
U23938-1|AAA65452.1| 35|Caenorhabditis elegans pra-1 protein. 33 0.28
AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical ... 33 0.28
AL032654-6|CAB54465.1| 467|Caenorhabditis elegans Hypothetical ... 32 0.37
Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical p... 32 0.49
Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical pr... 31 0.65
Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical pr... 30 2.0
AC087079-5|ABC48240.1| 367|Caenorhabditis elegans Hypothetical ... 29 2.6
AC087079-4|ABC48239.1| 370|Caenorhabditis elegans Hypothetical ... 29 2.6
AC024812-5|AAF59556.1| 191|Caenorhabditis elegans Hypothetical ... 29 3.5
Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z75531-6|CAA99807.1| 1144|Caenorhabditis elegans Hypothetical pr... 29 4.6
AL032618-1|CAB63366.1| 1045|Caenorhabditis elegans Hypothetical ... 29 4.6
AC092690-2|AAK73855.2| 745|Caenorhabditis elegans Hypothetical ... 29 4.6
AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G... 29 4.6
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 28 6.1
AC006659-2|AAF39883.2| 977|Caenorhabditis elegans Hypothetical ... 28 6.1
>U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family protein
10 protein.
Length = 201
Score = 155 bits (377), Expect = 2e-38
Identities = 72/96 (75%), Positives = 82/96 (85%)
Frame = +2
Query: 218 IKG*ENKAPDMGPAGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHAN 397
+KG + K AGQERFHTITTSYYRGAMGIMLVYDITN K+FD+I KWLRNIDEHA+
Sbjct: 53 LKGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHAS 112
Query: 398 EDVEKMILGNKCDMEEKRVVSKERGEAIAREHGIRF 505
EDV KMILGNKCDM ++RVVS+ERGE IA++HGI F
Sbjct: 113 EDVVKMILGNKCDMSDRRVVSRERGEKIAQDHGISF 148
Score = 122 bits (294), Expect = 3e-28
Identities = 55/68 (80%), Positives = 63/68 (92%)
Frame = +3
Query: 63 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKL 242
MA++ YD+LFKLLLIGDSGVGKTCIL+RFSD+ F TTFISTIGIDFKIKT+EL+GKKIKL
Sbjct: 1 MARRPYDMLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKL 60
Query: 243 QIWDLLGR 266
QIWD G+
Sbjct: 61 QIWDTAGQ 68
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = +1
Query: 505 HETSAKANINIDRAFSELAEAILDK 579
HETSAK N+++D AF +LAEAIL K
Sbjct: 149 HETSAKLNVHVDTAFYDLAEAILAK 173
>AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family
protein 8 protein.
Length = 211
Score = 135 bits (326), Expect = 4e-32
Identities = 58/89 (65%), Positives = 76/89 (85%)
Frame = +2
Query: 257 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCD 436
AGQERF TITT+YYRGAMGI+LVYDITNE++F++I W+RNI+EHA DVE+MI+GNKCD
Sbjct: 65 AGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNKCD 124
Query: 437 MEEKRVVSKERGEAIAREHGIRFMRRRLK 523
+EE+R VS++RGE +A E+G +F+ K
Sbjct: 125 IEERREVSRDRGEQLAIEYGTKFLETSAK 153
Score = 115 bits (276), Expect = 4e-26
Identities = 52/65 (80%), Positives = 58/65 (89%)
Frame = +3
Query: 72 KTYDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIW 251
KTYD LFKLLLIGDSGVGKTC+LFRFSD+ F +FISTIGIDFKI+T+EL GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 252 DLLGR 266
D G+
Sbjct: 63 DTAGQ 67
Score = 33.5 bits (73), Expect = 0.16
Identities = 18/32 (56%), Positives = 19/32 (59%)
Frame = +1
Query: 508 ETSAKANINIDRAFSELAEAILDKTAGREADA 603
ETSAKAN+NID AF LA I K E A
Sbjct: 149 ETSAKANLNIDEAFFTLARDIKSKMEQNEMRA 180
>AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein.
Length = 211
Score = 135 bits (326), Expect = 4e-32
Identities = 58/89 (65%), Positives = 76/89 (85%)
Frame = +2
Query: 257 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCD 436
AGQERF TITT+YYRGAMGI+LVYDITNE++F++I W+RNI+EHA DVE+MI+GNKCD
Sbjct: 65 AGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNKCD 124
Query: 437 MEEKRVVSKERGEAIAREHGIRFMRRRLK 523
+EE+R VS++RGE +A E+G +F+ K
Sbjct: 125 IEERREVSRDRGEQLAIEYGTKFLETSAK 153
Score = 115 bits (276), Expect = 4e-26
Identities = 52/65 (80%), Positives = 58/65 (89%)
Frame = +3
Query: 72 KTYDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIW 251
KTYD LFKLLLIGDSGVGKTC+LFRFSD+ F +FISTIGIDFKI+T+EL GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 252 DLLGR 266
D G+
Sbjct: 63 DTAGQ 67
Score = 33.5 bits (73), Expect = 0.16
Identities = 18/32 (56%), Positives = 19/32 (59%)
Frame = +1
Query: 508 ETSAKANINIDRAFSELAEAILDKTAGREADA 603
ETSAKAN+NID AF LA I K E A
Sbjct: 149 ETSAKANLNIDEAFFTLARDIKSKMEQNEMRA 180
>U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like
protein.
Length = 124
Score = 122 bits (294), Expect = 3e-28
Identities = 55/68 (80%), Positives = 63/68 (92%)
Frame = +3
Query: 63 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKL 242
MA++ YD+LFKLLLIGDSGVGKTCIL+RFSD+ F TTFISTIGIDFKIKT+EL+GKKIKL
Sbjct: 1 MARRPYDMLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKL 60
Query: 243 QIWDLLGR 266
QIWD G+
Sbjct: 61 QIWDTAGQ 68
Score = 120 bits (289), Expect = 1e-27
Identities = 56/72 (77%), Positives = 61/72 (84%)
Frame = +2
Query: 218 IKG*ENKAPDMGPAGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHAN 397
+KG + K AGQERFHTITTSYYRGAMGIMLVYDITN K+FD+I KWLRNIDEHA+
Sbjct: 53 LKGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHAS 112
Query: 398 EDVEKMILGNKC 433
EDV KMILGNKC
Sbjct: 113 EDVVKMILGNKC 124
>U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein.
Length = 123
Score = 115 bits (276), Expect = 4e-26
Identities = 52/65 (80%), Positives = 58/65 (89%)
Frame = +3
Query: 72 KTYDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIW 251
KTYD LFKLLLIGDSGVGKTC+LFRFSD+ F +FISTIGIDFKI+T+EL GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 252 DLLGR 266
D G+
Sbjct: 63 DTAGQ 67
Score = 104 bits (250), Expect = 6e-23
Identities = 44/59 (74%), Positives = 54/59 (91%)
Frame = +2
Query: 257 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKC 433
AGQERF TITT+YYRGAMGI+LVYDITNE++F++I W+RNI+EHA DVE+MI+GNKC
Sbjct: 65 AGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNKC 123
>U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated
protein 108 protein.
Length = 214
Score = 105 bits (251), Expect = 4e-23
Identities = 49/102 (48%), Positives = 65/102 (63%)
Frame = +2
Query: 218 IKG*ENKAPDMGPAGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHAN 397
I G + K AGQE F +IT SYYRGA G +LVYDIT TF+ + WL + +H+N
Sbjct: 50 IDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTSWLEDARQHSN 109
Query: 398 EDVEKMILGNKCDMEEKRVVSKERGEAIAREHGIRFMRRRLK 523
++ M++GNK D+E +R V +E GEA AREHG+ FM K
Sbjct: 110 SNMVIMLIGNKSDLEARREVKREEGEAFAREHGLVFMETSAK 151
Score = 73.3 bits (172), Expect = 2e-13
Identities = 31/64 (48%), Positives = 45/64 (70%)
Frame = +3
Query: 75 TYDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWD 254
+Y LFK ++IGD+GVGK+C+L +F+D F TIG++F + V + GK+IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGKQIKLQIWD 61
Query: 255 LLGR 266
G+
Sbjct: 62 TAGQ 65
>AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family
protein 1 protein.
Length = 205
Score = 103 bits (247), Expect = 1e-22
Identities = 45/89 (50%), Positives = 66/89 (74%)
Frame = +2
Query: 257 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCD 436
AGQERF TIT+SYYRGA GI++VYDIT+++TF+++ +WL+ ID +A E+V K+++GNKCD
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQWLQEIDRYACENVNKLLVGNKCD 127
Query: 437 MEEKRVVSKERGEAIAREHGIRFMRRRLK 523
+ KR V + + A + GI F+ K
Sbjct: 128 LTAKRAVETQAAQDYAGQLGIPFLETSAK 156
Score = 101 bits (242), Expect = 5e-22
Identities = 44/63 (69%), Positives = 55/63 (87%)
Frame = +3
Query: 78 YDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDL 257
YD LFKLLLIGDSGVGK+C+L RF+D+ +T ++ISTIG+DFKI+T+EL GK IKLQIWD
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 258 LGR 266
G+
Sbjct: 68 AGQ 70
>U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 101 bits (243), Expect = 4e-22
Identities = 43/89 (48%), Positives = 64/89 (71%)
Frame = +2
Query: 257 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCD 436
AGQER+ TITT+YYRGAMG +L+YDITNE++F+ + W I ++ E+ + +++GNKCD
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCD 138
Query: 437 MEEKRVVSKERGEAIAREHGIRFMRRRLK 523
M+ +RVVS +RG +A + G+ F K
Sbjct: 139 MDSERVVSMDRGRQLADQLGLEFFETSAK 167
Score = 87.8 bits (208), Expect = 7e-18
Identities = 37/65 (56%), Positives = 51/65 (78%)
Frame = +3
Query: 72 KTYDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIW 251
+ +D +FKLL+IG+S VGKT LFR+ D+ FT+ F+ST+GIDFK+KTV K++KLQIW
Sbjct: 17 QNFDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIW 76
Query: 252 DLLGR 266
D G+
Sbjct: 77 DTAGQ 81
Score = 32.7 bits (71), Expect = 0.28
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +1
Query: 508 ETSAKANINIDRAFSELAEAILDKTA 585
ETSAK NIN+ F +L E I DK A
Sbjct: 163 ETSAKENINVKAVFEKLVEIICDKMA 188
>U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 101 bits (243), Expect = 4e-22
Identities = 43/89 (48%), Positives = 64/89 (71%)
Frame = +2
Query: 257 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCD 436
AGQER+ TITT+YYRGAMG +L+YDITNE++F+ + W I ++ E+ + +++GNKCD
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCD 138
Query: 437 MEEKRVVSKERGEAIAREHGIRFMRRRLK 523
M+ +RVVS +RG +A + G+ F K
Sbjct: 139 MDSERVVSMDRGRQLADQLGLEFFETSAK 167
Score = 87.8 bits (208), Expect = 7e-18
Identities = 37/65 (56%), Positives = 51/65 (78%)
Frame = +3
Query: 72 KTYDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIW 251
+ +D +FKLL+IG+S VGKT LFR+ D+ FT+ F+ST+GIDFK+KTV K++KLQIW
Sbjct: 17 QNFDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIW 76
Query: 252 DLLGR 266
D G+
Sbjct: 77 DTAGQ 81
Score = 32.7 bits (71), Expect = 0.28
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +1
Query: 508 ETSAKANINIDRAFSELAEAILDKTA 585
ETSAK NIN+ F +L E I DK A
Sbjct: 163 ETSAKENINVKAVFEKLVEIICDKMA 188
>U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family
protein 3, isoform b protein.
Length = 219
Score = 101 bits (243), Expect = 4e-22
Identities = 43/89 (48%), Positives = 64/89 (71%)
Frame = +2
Query: 257 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCD 436
AGQER+ TITT+YYRGAMG +L+YDITNE++F+ + W I ++ E+ + +++GNKCD
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCD 138
Query: 437 MEEKRVVSKERGEAIAREHGIRFMRRRLK 523
M+ +RVVS +RG +A + G+ F K
Sbjct: 139 MDSERVVSMDRGRQLADQLGLEFFETSAK 167
Score = 87.8 bits (208), Expect = 7e-18
Identities = 37/65 (56%), Positives = 51/65 (78%)
Frame = +3
Query: 72 KTYDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIW 251
+ +D +FKLL+IG+S VGKT LFR+ D+ FT+ F+ST+GIDFK+KTV K++KLQIW
Sbjct: 17 QNFDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIW 76
Query: 252 DLLGR 266
D G+
Sbjct: 77 DTAGQ 81
Score = 32.7 bits (71), Expect = 0.28
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +1
Query: 508 ETSAKANINIDRAFSELAEAILDKTA 585
ETSAK NIN+ F +L E I DK A
Sbjct: 163 ETSAKENINVKAVFEKLVEIICDKMA 188
>U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family
protein 3, isoform a protein.
Length = 233
Score = 101 bits (243), Expect = 4e-22
Identities = 43/89 (48%), Positives = 64/89 (71%)
Frame = +2
Query: 257 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCD 436
AGQER+ TITT+YYRGAMG +L+YDITNE++F+ + W I ++ E+ + +++GNKCD
Sbjct: 93 AGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCD 152
Query: 437 MEEKRVVSKERGEAIAREHGIRFMRRRLK 523
M+ +RVVS +RG +A + G+ F K
Sbjct: 153 MDSERVVSMDRGRQLADQLGLEFFETSAK 181
Score = 87.8 bits (208), Expect = 7e-18
Identities = 37/65 (56%), Positives = 51/65 (78%)
Frame = +3
Query: 72 KTYDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIW 251
+ +D +FKLL+IG+S VGKT LFR+ D+ FT+ F+ST+GIDFK+KTV K++KLQIW
Sbjct: 31 QNFDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIW 90
Query: 252 DLLGR 266
D G+
Sbjct: 91 DTAGQ 95
Score = 32.7 bits (71), Expect = 0.28
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +1
Query: 508 ETSAKANINIDRAFSELAEAILDKTA 585
ETSAK NIN+ F +L E I DK A
Sbjct: 177 ETSAKENINVKAVFEKLVEIICDKMA 202
>AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein.
Length = 219
Score = 101 bits (243), Expect = 4e-22
Identities = 43/89 (48%), Positives = 64/89 (71%)
Frame = +2
Query: 257 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCD 436
AGQER+ TITT+YYRGAMG +L+YDITNE++F+ + W I ++ E+ + +++GNKCD
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCD 138
Query: 437 MEEKRVVSKERGEAIAREHGIRFMRRRLK 523
M+ +RVVS +RG +A + G+ F K
Sbjct: 139 MDSERVVSMDRGRQLADQLGLEFFETSAK 167
Score = 87.8 bits (208), Expect = 7e-18
Identities = 37/65 (56%), Positives = 51/65 (78%)
Frame = +3
Query: 72 KTYDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIW 251
+ +D +FKLL+IG+S VGKT LFR+ D+ FT+ F+ST+GIDFK+KTV K++KLQIW
Sbjct: 17 QNFDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIW 76
Query: 252 DLLGR 266
D G+
Sbjct: 77 DTAGQ 81
Score = 32.7 bits (71), Expect = 0.28
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +1
Query: 508 ETSAKANINIDRAFSELAEAILDKTA 585
ETSAK NIN+ F +L E I DK A
Sbjct: 163 ETSAKENINVKAVFEKLVEIICDKMA 188
>U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein.
Length = 69
Score = 101 bits (241), Expect = 7e-22
Identities = 44/62 (70%), Positives = 54/62 (87%)
Frame = +3
Query: 78 YDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDL 257
YD LFKLLLIGDSGVGK+C+L RF+D+ +T ++ISTIG+DFKI+T+EL GK IKLQIWD
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 258 LG 263
G
Sbjct: 68 AG 69
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 93.5 bits (222), Expect = 1e-19
Identities = 38/65 (58%), Positives = 55/65 (84%)
Frame = +3
Query: 72 KTYDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIW 251
+ YD LFKLL+IGDSGVGK+ +L RF+DN F+ +I+TIG+DFKI+T+++ G+++KLQIW
Sbjct: 5 RDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSENYITTIGVDFKIRTMDINGQRVKLQIW 64
Query: 252 DLLGR 266
D G+
Sbjct: 65 DTAGQ 69
Score = 86.2 bits (204), Expect = 2e-17
Identities = 37/89 (41%), Positives = 60/89 (67%)
Frame = +2
Query: 257 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCD 436
AGQERF TIT++YYRG G+++VYD+TN ++F ++ +WL+ I+ + + V+K+++GNKC+
Sbjct: 67 AGQERFRTITSTYYRGTHGVVVVYDVTNGESFGNVKRWLQEIENNC-DSVQKVLVGNKCE 125
Query: 437 MEEKRVVSKERGEAIAREHGIRFMRRRLK 523
E+RVV + A+ I F K
Sbjct: 126 ENERRVVLESDARNYAQSMNISFFETSAK 154
>U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein.
Length = 66
Score = 91.5 bits (217), Expect = 6e-19
Identities = 37/61 (60%), Positives = 53/61 (86%)
Frame = +3
Query: 72 KTYDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIW 251
+ YD LFKLL+IGDSGVGK+ +L RF+DN F+ +I+TIG+DFKI+T+++ G+++KLQIW
Sbjct: 5 RDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSENYITTIGVDFKIRTMDINGQRVKLQIW 64
Query: 252 D 254
D
Sbjct: 65 D 65
>Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical
protein F11A5.4 protein.
Length = 203
Score = 86.6 bits (205), Expect = 2e-17
Identities = 39/83 (46%), Positives = 56/83 (67%)
Frame = +2
Query: 260 GQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCDM 439
GQERF ++ SYYR A+G +LVYDIT+ ++F + WL ++ + D+ +++GNK D+
Sbjct: 64 GQERFRSLVGSYYRHAIGALLVYDITSRESFYHLEHWLTDLQRLGDPDIVIVLIGNKSDL 123
Query: 440 EEKRVVSKERGEAIAREHGIRFM 508
E R V KE GEA ARE G+ FM
Sbjct: 124 EADREVRKEEGEAFAREFGLIFM 146
Score = 62.1 bits (144), Expect = 4e-10
Identities = 27/62 (43%), Positives = 41/62 (66%)
Frame = +3
Query: 81 DLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDLL 260
D +FK ++IGD GVGK+ +L RF F + ST+GI+F + +E+ KK+KL +WD
Sbjct: 4 DHVFKYVIIGDRGVGKSNLLLRFIGKPFDSIHPSTLGIEFGFRNLEIDRKKVKLHVWDTC 63
Query: 261 GR 266
G+
Sbjct: 64 GQ 65
>AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical
protein Y62E10A.9 protein.
Length = 210
Score = 85.8 bits (203), Expect = 3e-17
Identities = 35/80 (43%), Positives = 56/80 (70%)
Frame = +2
Query: 260 GQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCDM 439
GQERF TIT SYYR A GI+L YDIT +++F + +W+ ++ + A +V K+++G KCD+
Sbjct: 68 GQERFRTITQSYYRSANGIVLCYDITCKQSFGSLQRWIDDVSKFAAPNVVKLLIGTKCDL 127
Query: 440 EEKRVVSKERGEAIAREHGI 499
E++R + E E + R +G+
Sbjct: 128 EDQRAIEAEEAEMLQRANGM 147
Score = 75.8 bits (178), Expect = 3e-14
Identities = 32/63 (50%), Positives = 47/63 (74%)
Frame = +3
Query: 78 YDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDL 257
+D LFK++L+GD GVGKTC++ RF + F +TIG+DF +KT+ + GK++KLQIWD
Sbjct: 7 FDYLFKIVLVGDMGVGKTCVVQRFRNGTFVDRQGTTIGVDFTMKTLVVDGKRVKLQIWDT 66
Query: 258 LGR 266
G+
Sbjct: 67 GGQ 69
Score = 31.5 bits (68), Expect = 0.65
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +1
Query: 508 ETSAKANINIDRAFSELA 561
ETSAK N+N+D AF ELA
Sbjct: 152 ETSAKGNVNVDNAFLELA 169
>Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical
protein F11A5.3 protein.
Length = 201
Score = 85.4 bits (202), Expect = 4e-17
Identities = 37/88 (42%), Positives = 59/88 (67%)
Frame = +2
Query: 260 GQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCDM 439
GQE F +I +YYR A+G +LVYDIT K+F + +WL ++ +H + ++ M++GNK D+
Sbjct: 64 GQENFRSIIRAYYRNALGALLVYDITCRKSFVHLEQWLSDLRQHGHPEMVIMLIGNKSDL 123
Query: 440 EEKRVVSKERGEAIAREHGIRFMRRRLK 523
+ R V+ E GEA A+++G+ FM K
Sbjct: 124 KAVRDVTTEEGEAFAKKNGLTFMETSAK 151
Score = 60.5 bits (140), Expect = 1e-09
Identities = 24/62 (38%), Positives = 42/62 (67%)
Frame = +3
Query: 81 DLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDLL 260
D +FK ++IGD GVGK+ +L RF+D F +T+G++F K +++ K++L++WD
Sbjct: 4 DHMFKYVIIGDGGVGKSNLLLRFTDELFDPIHTTTLGVEFGYKDLQIDKYKVRLRVWDTC 63
Query: 261 GR 266
G+
Sbjct: 64 GQ 65
>U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical
protein K02E10.1 protein.
Length = 218
Score = 85.0 bits (201), Expect = 5e-17
Identities = 38/82 (46%), Positives = 56/82 (68%), Gaps = 1/82 (1%)
Frame = +2
Query: 257 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVK-WLRNIDEHANEDVEKMILGNKC 433
AG ER+ TI SYY A G+M VYD+TNEK+F+++ K WL+ I +HA + M++GNK
Sbjct: 63 AGMERYRTIYNSYYHSAHGVMCVYDMTNEKSFENLEKYWLKEIKQHAPPNAVLMLVGNKA 122
Query: 434 DMEEKRVVSKERGEAIAREHGI 499
DM+++R V +R E +A G+
Sbjct: 123 DMDQERKVDFDRAEKLASRLGV 144
Score = 78.2 bits (184), Expect = 6e-15
Identities = 31/63 (49%), Positives = 48/63 (76%)
Frame = +3
Query: 75 TYDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWD 254
+Y+ LFK++++GD GK+CIL RF++N F IST+G+DFK+KT++L KI+L++WD
Sbjct: 2 SYNHLFKIVVVGDHNCGKSCILLRFAENSFRMDHISTLGVDFKLKTIKLGRDKIRLELWD 61
Query: 255 LLG 263
G
Sbjct: 62 TAG 64
>Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical
protein K09A9.2 protein.
Length = 210
Score = 84.6 bits (200), Expect = 7e-17
Identities = 36/84 (42%), Positives = 53/84 (63%)
Frame = +2
Query: 257 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCD 436
AGQERF +T SYYRGA G ++VYDIT T++ + WL + N + ++GNK D
Sbjct: 68 AGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLADAKSLTNPNTAIFLIGNKAD 127
Query: 437 MEEKRVVSKERGEAIAREHGIRFM 508
+E++R V E +A A E+G+ F+
Sbjct: 128 LEDQRDVPYEEAKAFAEENGLTFL 151
Score = 72.1 bits (169), Expect = 4e-13
Identities = 30/67 (44%), Positives = 45/67 (67%)
Frame = +3
Query: 66 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQ 245
A Y +FK ++IGD GVGK+C+L +F++ F TIG++F + +E+ G+KIKLQ
Sbjct: 4 APYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQ 63
Query: 246 IWDLLGR 266
IWD G+
Sbjct: 64 IWDTAGQ 70
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 84.6 bits (200), Expect = 7e-17
Identities = 38/90 (42%), Positives = 59/90 (65%), Gaps = 1/90 (1%)
Frame = +2
Query: 257 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEH-ANEDVEKMILGNKC 433
AGQERF T+T SYYRGA G++ VYD+T+ +F+ + W++ +D + N+++ KM++ NK
Sbjct: 68 AGQERFRTLTPSYYRGAQGVICVYDVTSRSSFEKLNHWMQEVDTYCTNDNIIKMMVANKI 127
Query: 434 DMEEKRVVSKERGEAIAREHGIRFMRRRLK 523
DM RVV++E G A+ H F+ K
Sbjct: 128 DM-PNRVVTREEGLKFAKRHRTLFIEASAK 156
Score = 63.3 bits (147), Expect = 2e-10
Identities = 25/58 (43%), Positives = 42/58 (72%)
Frame = +3
Query: 93 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDLLGR 266
K+L+IG+SGVGK+ ++ RF D+ F +TIG+DF++ ++ + G ++KL IWD G+
Sbjct: 13 KILIIGESGVGKSSLMLRFVDDVFDPEQAATIGVDFRVTSMAIDGNRVKLAIWDTAGQ 70
>AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family
protein 11.1 protein.
Length = 211
Score = 84.2 bits (199), Expect = 9e-17
Identities = 35/97 (36%), Positives = 62/97 (63%)
Frame = +2
Query: 218 IKG*ENKAPDMGPAGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHAN 397
++G KA AGQER+ IT++YYRGA+G +LVYDI T++++ +WL+ + +HA+
Sbjct: 55 VEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHAD 114
Query: 398 EDVEKMILGNKCDMEEKRVVSKERGEAIAREHGIRFM 508
+++ M++GNK D+ R V + + A + + F+
Sbjct: 115 QNIVIMLVGNKSDLRHLRAVPTDEAKIYAERNQLSFI 151
Score = 74.1 bits (174), Expect = 9e-14
Identities = 32/63 (50%), Positives = 45/63 (71%)
Frame = +3
Query: 78 YDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDL 257
YD LFK++LIGDSGVGK+ +L RF+ N F STIG++F +++ + GK +K QIWD
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQIWDT 67
Query: 258 LGR 266
G+
Sbjct: 68 AGQ 70
>AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family
protein 37 protein.
Length = 196
Score = 83.0 bits (196), Expect = 2e-16
Identities = 39/89 (43%), Positives = 55/89 (61%)
Frame = +2
Query: 257 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCD 436
AGQERF ++TTSYYR A ++LVYDI N +F++ WL I E+ E V+ ++GNKCD
Sbjct: 60 AGQERFRSVTTSYYRDADALLLVYDIANRASFENCRNWLSQIKEYGKEAVQVTLVGNKCD 119
Query: 437 MEEKRVVSKERGEAIAREHGIRFMRRRLK 523
+ R V + G+ +A + I FM K
Sbjct: 120 L--PRAVPTDEGKRLAEAYQIPFMETSAK 146
Score = 72.1 bits (169), Expect = 4e-13
Identities = 37/80 (46%), Positives = 50/80 (62%), Gaps = 5/80 (6%)
Frame = +3
Query: 84 LLFKLLLIGDSGVGKTCILFRFSDNHF-TTTFISTIGIDFKIKTVELRGKKIKLQIWDLL 260
+ K++L+GDS GKTC+L R+ D F FIST+GID++ K + + KK+KLQIWD
Sbjct: 1 MFLKVMLLGDSCTGKTCLLIRYKDGAFLNNNFISTVGIDYRNKLITMGDKKVKLQIWDTA 60
Query: 261 G----RSVSTPSRRRITAAL 308
G RSV+T R A L
Sbjct: 61 GQERFRSVTTSYYRDADALL 80
Score = 32.7 bits (71), Expect = 0.28
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +1
Query: 499 PLHETSAKANINIDRAFSELAEAIL 573
P ETSAK N+DRAF LAE +L
Sbjct: 139 PFMETSAKTGFNVDRAFLGLAERML 163
>AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein.
Length = 196
Score = 83.0 bits (196), Expect = 2e-16
Identities = 39/89 (43%), Positives = 55/89 (61%)
Frame = +2
Query: 257 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCD 436
AGQERF ++TTSYYR A ++LVYDI N +F++ WL I E+ E V+ ++GNKCD
Sbjct: 60 AGQERFRSVTTSYYRDADALLLVYDIANRASFENCRNWLSQIKEYGKEAVQVTLVGNKCD 119
Query: 437 MEEKRVVSKERGEAIAREHGIRFMRRRLK 523
+ R V + G+ +A + I FM K
Sbjct: 120 L--PRAVPTDEGKRLAEAYQIPFMETSAK 146
Score = 72.1 bits (169), Expect = 4e-13
Identities = 37/80 (46%), Positives = 50/80 (62%), Gaps = 5/80 (6%)
Frame = +3
Query: 84 LLFKLLLIGDSGVGKTCILFRFSDNHF-TTTFISTIGIDFKIKTVELRGKKIKLQIWDLL 260
+ K++L+GDS GKTC+L R+ D F FIST+GID++ K + + KK+KLQIWD
Sbjct: 1 MFLKVMLLGDSCTGKTCLLIRYKDGAFLNNNFISTVGIDYRNKLITMGDKKVKLQIWDTA 60
Query: 261 G----RSVSTPSRRRITAAL 308
G RSV+T R A L
Sbjct: 61 GQERFRSVTTSYYRDADALL 80
Score = 32.7 bits (71), Expect = 0.28
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +1
Query: 499 PLHETSAKANINIDRAFSELAEAIL 573
P ETSAK N+DRAF LAE +L
Sbjct: 139 PFMETSAKTGFNVDRAFLGLAERML 163
>Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical
protein T01B7.3 protein.
Length = 207
Score = 81.4 bits (192), Expect = 6e-16
Identities = 37/103 (35%), Positives = 60/103 (58%)
Frame = +2
Query: 200 QNKDSGIKG*ENKAPDMGPAGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRN 379
QNK ++ + AGQE++H + YYRG+ G++LV+DIT+ K+F+ + W+
Sbjct: 50 QNKTVNVEDCQADLHIWDTAGQEKYHALGPIYYRGSNGVLLVFDITDRKSFEKVKNWVLE 109
Query: 380 IDEHANEDVEKMILGNKCDMEEKRVVSKERGEAIAREHGIRFM 508
I E +I+GNK D+EE+R V+++ EA A G +M
Sbjct: 110 IKTCLGNTAEILIVGNKIDLEEERQVTRQDAEAYAESEGALYM 152
Score = 52.0 bits (119), Expect = 4e-07
Identities = 23/59 (38%), Positives = 37/59 (62%)
Frame = +3
Query: 90 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDLLGR 266
FK++L+G+ VGK+ ++ RF +N F+ +STI F+ KTV + + L IWD G+
Sbjct: 13 FKIVLLGEGCVGKSSLVLRFVENKFSCKHLSTIQASFQNKTVNVEDCQADLHIWDTAGQ 71
>Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical
protein F26H9.6 protein.
Length = 208
Score = 80.2 bits (189), Expect = 1e-15
Identities = 33/89 (37%), Positives = 52/89 (58%)
Frame = +2
Query: 257 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCD 436
AGQER+H++ YYRGA ++VYDITN+++F W++ + A+ ++ + GNK D
Sbjct: 76 AGQERYHSLAPMYYRGAQAAIVVYDITNQESFQKAKNWVKELQRQASPNIVMALAGNKAD 135
Query: 437 MEEKRVVSKERGEAIAREHGIRFMRRRLK 523
+ KR V E A A ++ + FM K
Sbjct: 136 VANKRTVEYEEANAYAEDNALLFMETSAK 164
Score = 50.8 bits (116), Expect = 1e-06
Identities = 26/59 (44%), Positives = 35/59 (59%)
Frame = +3
Query: 90 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDLLGR 266
FKL+L+G+S VGK+ ++ RF F STIG F +TV L IK +IWD G+
Sbjct: 20 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDATIKFEIWDTAGQ 78
>AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical
protein Y87G2A.4 protein.
Length = 215
Score = 79.8 bits (188), Expect = 2e-15
Identities = 37/84 (44%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Frame = +2
Query: 257 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHAN-EDVEKMILGNKC 433
AGQERF ++TT+++R AMG +L++DITNE++F +I WL + HA E + +I GNK
Sbjct: 73 AGQERFRSLTTAFFRDAMGFILIFDITNEQSFLNIRDWLSQLKVHAYCEQPDIIICGNKA 132
Query: 434 DMEEKRVVSKERGEAIAREHGIRF 505
D+E +R VS R + +A + G+ +
Sbjct: 133 DLENRRQVSTARAKQLADQLGLPY 156
Score = 72.1 bits (169), Expect = 4e-13
Identities = 37/72 (51%), Positives = 46/72 (63%), Gaps = 9/72 (12%)
Frame = +3
Query: 78 YDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVEL---------RGK 230
YD L K L +GDSGVGKT L R++DN FT FIST+GIDFK K V RG+
Sbjct: 4 YDYLIKFLALGDSGVGKTSFLHRYTDNTFTGQFISTVGIDFKEKKVVYKSSRGGFGGRGQ 63
Query: 231 KIKLQIWDLLGR 266
++ LQ+WD G+
Sbjct: 64 RVLLQLWDTAGQ 75
>AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein.
Length = 215
Score = 79.8 bits (188), Expect = 2e-15
Identities = 37/84 (44%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Frame = +2
Query: 257 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHAN-EDVEKMILGNKC 433
AGQERF ++TT+++R AMG +L++DITNE++F +I WL + HA E + +I GNK
Sbjct: 73 AGQERFRSLTTAFFRDAMGFILIFDITNEQSFLNIRDWLSQLKVHAYCEQPDIIICGNKA 132
Query: 434 DMEEKRVVSKERGEAIAREHGIRF 505
D+E +R VS R + +A + G+ +
Sbjct: 133 DLENRRQVSTARAKQLADQLGLPY 156
Score = 72.1 bits (169), Expect = 4e-13
Identities = 37/72 (51%), Positives = 46/72 (63%), Gaps = 9/72 (12%)
Frame = +3
Query: 78 YDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVEL---------RGK 230
YD L K L +GDSGVGKT L R++DN FT FIST+GIDFK K V RG+
Sbjct: 4 YDYLIKFLALGDSGVGKTSFLHRYTDNTFTGQFISTVGIDFKEKKVVYKSSRGGFGGRGQ 63
Query: 231 KIKLQIWDLLGR 266
++ LQ+WD G+
Sbjct: 64 RVLLQLWDTAGQ 75
>U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like
protein.
Length = 127
Score = 79.0 bits (186), Expect = 3e-15
Identities = 34/94 (36%), Positives = 60/94 (63%), Gaps = 4/94 (4%)
Frame = +2
Query: 167 NDFYFDDRYRL----QNKDSGIKG*ENKAPDMGPAGQERFHTITTSYYRGAMGIMLVYDI 334
N+F+ + + + + ++G KA AGQER+ IT++YYRGA+G +LVYDI
Sbjct: 34 NEFHLESKSTIGVEFATRSISVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI 93
Query: 335 TNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCD 436
T++++ +WL+ + +HA++++ M +GNKCD
Sbjct: 94 AKHVTYENVERWLKELRDHADQNIVIMPVGNKCD 127
Score = 73.3 bits (172), Expect = 2e-13
Identities = 32/63 (50%), Positives = 45/63 (71%)
Frame = +3
Query: 78 YDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDL 257
YD LFK++LIGDSGVGK+ +L RF+ N F STIG++F +++ + GK +K QIWD
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFHLESKSTIGVEFATRSISVEGKTVKAQIWDT 67
Query: 258 LGR 266
G+
Sbjct: 68 AGQ 70
>U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical
protein C56E6.2 protein.
Length = 266
Score = 77.4 bits (182), Expect = 1e-14
Identities = 34/84 (40%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Frame = +2
Query: 257 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHA-NEDVEKMILGNKC 433
AGQERF + Y R A ++VYD+T+ TF+D+ KWL+++D + ED ++GNK
Sbjct: 113 AGQERFRCMVPMYMRNADAALIVYDVTDRNTFEDVEKWLKDLDRSSGTEDANVYLIGNKT 172
Query: 434 DMEEKRVVSKERGEAIAREHGIRF 505
D+ EKR V++ G+A+A + +F
Sbjct: 173 DLVEKREVTEAEGKAMAAKINAKF 196
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Frame = +3
Query: 93 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTV--ELRGKK--IKLQIWDLL 260
K++++GDSGVGKT I++R +TIG F V + R ++ ++LQ+WD
Sbjct: 54 KVVVLGDSGVGKTSIIYRHRYGAHYRPVNATIGASFVSFDVGADYRDREDVVRLQVWDTA 113
Query: 261 GR 266
G+
Sbjct: 114 GQ 115
>U68260-1|AAB16975.1| 69|Caenorhabditis elegans rab19-like
protein.
Length = 69
Score = 76.6 bits (180), Expect = 2e-14
Identities = 32/62 (51%), Positives = 46/62 (74%)
Frame = +3
Query: 78 YDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDL 257
+D LFK++L+GD GVGKTC++ RF + F +TIG+DF +KT+ + GK++KLQIWD
Sbjct: 7 FDYLFKIVLVGDMGVGKTCVVQRFRNGTFVDRQGTTIGVDFTMKTLVVDGKRVKLQIWDT 66
Query: 258 LG 263
G
Sbjct: 67 AG 68
>Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical
protein W04G5.2 protein.
Length = 198
Score = 76.2 bits (179), Expect = 2e-14
Identities = 34/84 (40%), Positives = 53/84 (63%)
Frame = +2
Query: 257 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCD 436
AG ERF +SYYRGA+G +LVYDI+ KT++ + +WL+ + +HANED+ ++GNK D
Sbjct: 65 AGMERFRCGASSYYRGALGALLVYDISKHKTYESVEQWLKVLRDHANEDIVITLVGNKSD 124
Query: 437 MEEKRVVSKERGEAIAREHGIRFM 508
+ V + + A + I F+
Sbjct: 125 L--SHAVPTDEAKIYAERNHISFI 146
Score = 65.7 bits (153), Expect = 3e-11
Identities = 29/62 (46%), Positives = 41/62 (66%)
Frame = +3
Query: 78 YDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDL 257
Y LFK++LIG+ GVGK+ +L RF+ N F TIG++F K + + GK +K+QIWD
Sbjct: 5 YYYLFKIVLIGNPGVGKSNLLSRFTRNEFNLKSKPTIGVEFATKIISVEGKAVKVQIWDT 64
Query: 258 LG 263
G
Sbjct: 65 AG 66
>AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family
protein 18, isoform a protein.
Length = 193
Score = 76.2 bits (179), Expect = 2e-14
Identities = 37/95 (38%), Positives = 59/95 (62%), Gaps = 9/95 (9%)
Frame = +2
Query: 257 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEH-ANEDVEKMILGNKC 433
AGQERF T+T SYYRGA G++ VYD+T+ +F+ + W++ +D + N+++ KM++ NK
Sbjct: 41 AGQERFRTLTPSYYRGAQGVICVYDVTSRSSFEKLNHWMQEVDTYCTNDNIIKMMVANKI 100
Query: 434 DMEEK-RVVS-------KERGEAIAREHGIRFMRR 514
DM K R S + + RE G++F +R
Sbjct: 101 DMVRKSRFCSIFGLKNNFQPNRVVTREEGLKFAKR 135
Score = 42.3 bits (95), Expect = 3e-04
Identities = 16/43 (37%), Positives = 28/43 (65%)
Frame = +3
Query: 138 LFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDLLGR 266
+ RF D+ F +TIG+DF++ ++ + G ++KL IWD G+
Sbjct: 1 MLRFVDDVFDPEQAATIGVDFRVTSMAIDGNRVKLAIWDTAGQ 43
>AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical
protein Y45F3A.2 protein.
Length = 216
Score = 74.5 bits (175), Expect = 7e-14
Identities = 34/72 (47%), Positives = 50/72 (69%)
Frame = +2
Query: 257 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCD 436
AGQERF +IT SYYR A I+LVYD++ + +FD + +WL I+ +AN V K+++GNK D
Sbjct: 64 AGQERFRSITQSYYRSAHAIVLVYDVSCQPSFDCLPEWLGEIESYANRRVLKILVGNKVD 123
Query: 437 MEEKRVVSKERG 472
++R V + G
Sbjct: 124 KGDEREVPERIG 135
Score = 72.9 bits (171), Expect = 2e-13
Identities = 32/63 (50%), Positives = 46/63 (73%)
Frame = +3
Query: 78 YDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDL 257
Y LFK++L+G++GVGKTC++ +F+ F +TIG+DF IKTV++ KIKLQIWD
Sbjct: 4 YKYLFKVVLVGNAGVGKTCLVRKFTQGIFPPGQSATIGVDFMIKTVKVGNDKIKLQIWDT 63
Query: 258 LGR 266
G+
Sbjct: 64 AGQ 66
>U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family protein
6.2 protein.
Length = 205
Score = 73.7 bits (173), Expect = 1e-13
Identities = 34/89 (38%), Positives = 52/89 (58%)
Frame = +2
Query: 257 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCD 436
AGQERF ++ SY R + ++VYDITN +F KW+ ++ DV M++GNK D
Sbjct: 67 AGQERFRSLIPSYIRDSTVAVVVYDITNSNSFHQTSKWIDDVRTERGSDVIIMLVGNKTD 126
Query: 437 MEEKRVVSKERGEAIAREHGIRFMRRRLK 523
+ +KR V+ + GE A+E + F+ K
Sbjct: 127 LSDKRQVTTDEGERKAKELNVMFIETSAK 155
Score = 61.7 bits (143), Expect = 5e-10
Identities = 26/59 (44%), Positives = 40/59 (67%)
Frame = +3
Query: 90 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDLLGR 266
FKL+ +G+ VGKT ++ RF + F T+ +TIGIDF KT+ L + ++LQ+WD G+
Sbjct: 11 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 69
>Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical
protein F59B2.7 protein.
Length = 205
Score = 72.1 bits (169), Expect = 4e-13
Identities = 35/89 (39%), Positives = 52/89 (58%)
Frame = +2
Query: 257 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCD 436
AGQERF ++ SY R + ++VYDITN +F KW+ ++ DV +++GNK D
Sbjct: 68 AGQERFRSLIPSYIRDSSVAVVVYDITNANSFHQTTKWVDDVRNERGCDVIIVLVGNKTD 127
Query: 437 MEEKRVVSKERGEAIAREHGIRFMRRRLK 523
+ +KR VS E GE AR+ + F+ K
Sbjct: 128 LADKRQVSTEDGEKKARDLNVMFIETSAK 156
Score = 62.9 bits (146), Expect = 2e-10
Identities = 28/59 (47%), Positives = 40/59 (67%)
Frame = +3
Query: 90 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDLLGR 266
FKL+ +G+ VGKT I+ RF + F T+ +TIGIDF KT+ L + I+LQ+WD G+
Sbjct: 12 FKLVFLGEQSVGKTSIITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQ 70
>U68259-1|AAB16974.1| 69|Caenorhabditis elegans rab14-like
protein.
Length = 69
Score = 71.7 bits (168), Expect = 5e-13
Identities = 30/66 (45%), Positives = 44/66 (66%)
Frame = +3
Query: 66 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQ 245
A Y +FK ++IGD GVGK+C+L +F++ F TIG++F + +E+ G+KIKLQ
Sbjct: 4 APYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQ 63
Query: 246 IWDLLG 263
IWD G
Sbjct: 64 IWDTAG 69
>Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical
protein D2013.1 protein.
Length = 229
Score = 71.3 bits (167), Expect = 7e-13
Identities = 31/88 (35%), Positives = 55/88 (62%), Gaps = 4/88 (4%)
Frame = +2
Query: 257 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLR----NIDEHANEDVEKMILG 424
AGQE+F +IT SYYR ++G++ +YD TN ++F+ + W++ N+ + ++G
Sbjct: 75 AGQEKFRSITKSYYRNSVGVLAIYDTTNRESFEHVENWVKEAALNLGGPSPSKCVFQLVG 134
Query: 425 NKCDMEEKRVVSKERGEAIAREHGIRFM 508
K DM+ +R V+ E GE A+ H ++F+
Sbjct: 135 TKSDMDSQRQVNYEEGEYFAKYHKMKFI 162
Score = 54.8 bits (126), Expect = 6e-08
Identities = 24/60 (40%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Frame = +3
Query: 90 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELR-GKKIKLQIWDLLGR 266
++L++IGDS VGK+ +L F++ T+G+DF + +ELR G ++KLQ+WD G+
Sbjct: 18 YRLIVIGDSTVGKSSLLRYFTEGKMAEISDPTVGVDFYARMIELRPGYRVKLQLWDTAGQ 77
>U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein.
Length = 66
Score = 71.3 bits (167), Expect = 7e-13
Identities = 30/64 (46%), Positives = 45/64 (70%)
Frame = +3
Query: 75 TYDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWD 254
+Y LFK ++IGD+GVGK+C+L +F+D F TIG++F + V + GK+IKLQ+WD
Sbjct: 2 SYAYLFKHIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGKQIKLQMWD 61
Query: 255 LLGR 266
G+
Sbjct: 62 TAGQ 65
>Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical
protein C27B7.8 protein.
Length = 188
Score = 70.1 bits (164), Expect = 2e-12
Identities = 40/115 (34%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Frame = +2
Query: 182 DDRYRLQNKDSGIKG*ENKAPDMGPAGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDI 361
+D YR Q + + G + + AG E+F + Y + G +LVY IT + TF+D+
Sbjct: 37 EDSYRKQVE---VDGQQCMLEILDTAGTEQFTAMRDLYMKNGQGFVLVYSITAQSTFNDL 93
Query: 362 VKWLRNIDEHANEDVEKMIL-GNKCDMEEKRVVSKERGEAIAREHGIRFMRRRLK 523
+ I + D MIL GNKCD+E++RVV K++G+ +AR+ G F+ K
Sbjct: 94 MDLRDQILRVKDTDEVPMILVGNKCDLEDERVVGKDQGQNLARQFGSAFLETSAK 148
>U68262-1|AAB16977.1| 74|Caenorhabditis elegans RAM1-like protein.
Length = 74
Score = 68.5 bits (160), Expect = 5e-12
Identities = 37/71 (52%), Positives = 43/71 (60%), Gaps = 9/71 (12%)
Frame = +3
Query: 78 YDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVEL---------RGK 230
YD L K L GD GVGKT L R++DN FT FIST+GIDFK K V RG+
Sbjct: 4 YDYLIKFLAPGDPGVGKTSFLHRYTDNTFTGQFISTVGIDFKEKKVVYESSRGGFGGRGQ 63
Query: 231 KIKLQIWDLLG 263
++ LQIWD G
Sbjct: 64 RVLLQIWDTAG 74
>AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical
protein 4R79.2 protein.
Length = 395
Score = 68.5 bits (160), Expect = 5e-12
Identities = 29/63 (46%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Frame = +3
Query: 81 DLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVEL-RGKKIKLQIWDL 257
D +FK++ +GDS VGKTC L RF N F F +TIG+DF +KT+++ + I +Q+WD
Sbjct: 200 DRIFKVVFVGDSAVGKTCFLHRFCHNRFKPLFNATIGVDFTVKTMKIPPNRAIAMQLWDT 259
Query: 258 LGR 266
G+
Sbjct: 260 AGQ 262
Score = 56.8 bits (131), Expect = 2e-08
Identities = 22/61 (36%), Positives = 42/61 (68%)
Frame = +2
Query: 257 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCD 436
AGQERF +IT Y+R A G++L++D+T+E++F ++ W+ ++ ++ ++GNK D
Sbjct: 260 AGQERFRSITKQYFRKADGVVLMFDVTSEQSFLNVRNWIDSVRAGVDDATVMCLVGNKMD 319
Query: 437 M 439
+
Sbjct: 320 L 320
>AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical
protein Y71H2AM.12 protein.
Length = 195
Score = 64.5 bits (150), Expect = 8e-11
Identities = 30/59 (50%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Frame = +3
Query: 93 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELR-GKKIKLQIWDLLGR 266
K++++G+SG GKT +L F DN F T ++TIGIDFK K V+L G+ I+LQ+WD G+
Sbjct: 8 KVVVVGESGAGKTALLTCFLDNTFETDPLTTIGIDFKHKIVQLNDGQSIRLQLWDTAGQ 66
Score = 52.4 bits (120), Expect = 3e-07
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Frame = +2
Query: 257 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCD 436
AGQERF + +Y R A +LV D+++E + +++W ID++ ++ +I+GNK D
Sbjct: 64 AGQERFRQLAPAYIRSARVALLVIDLSDENCVEHLIRWKGIIDKNKSDFTSTIIVGNKHD 123
Query: 437 M-EEKRVVSKERGEAIAREHGIRFMRRRLK 523
+ EKR R AI RE ++ K
Sbjct: 124 LVSEKR---SPRLTAIIRETNDEYIETSAK 150
>Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical
protein F43D9.2 protein.
Length = 307
Score = 63.3 bits (147), Expect = 2e-10
Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Frame = +2
Query: 257 AGQERFH-TITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEH---ANEDVEKMILG 424
AGQER+ +I YYR ++ VYD+T ++F+D+ W++ ++H + +V ++++G
Sbjct: 157 AGQERYRQSIVAHYYRNVNAVVFVYDVTCRESFNDLALWIKECEKHGLVGDSEVPRILIG 216
Query: 425 NKCDMEEKRVVSKERGEAIAREHGIRFMRRRLK 523
NKCD+E VS + + A + + K
Sbjct: 217 NKCDVECTNRVSTDEAQMFADRNNMALFETSAK 249
Score = 56.8 bits (131), Expect = 2e-08
Identities = 21/59 (35%), Positives = 40/59 (67%)
Frame = +3
Query: 90 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDLLGR 266
FK++++G++ VGKTC+ FRF F +TIG+DF+ ++ + + +++Q+WD G+
Sbjct: 101 FKVIIVGNAAVGKTCLSFRFCCGRFPEHTEATIGVDFRERSCVIENELLRVQLWDTAGQ 159
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 62.9 bits (146), Expect = 2e-10
Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Frame = +2
Query: 257 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCD 436
AGQERF ++ SY+R A G +LVYD+ E++F + W+ I E + +++GNK D
Sbjct: 518 AGQERFRSLCKSYFRRADGAILVYDVCAEQSFLRVRDWIETIKESTERSIPIILVGNKVD 577
Query: 437 M--EEKRVVSKERGEAIAREHGIRFM 508
M V+K G ++A G+ FM
Sbjct: 578 MRISTPGSVAKTDGASMAAAMGVLFM 603
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/59 (38%), Positives = 38/59 (64%)
Frame = +3
Query: 90 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDLLGR 266
F++++ GD+ VGK+ + R FT ST+G+DF +KTV + G+ + LQ+WD G+
Sbjct: 462 FRIVMCGDAAVGKSSFVMRVIRRQFTNQLPSTLGVDFHVKTVNVDGRNVALQLWDTAGQ 520
>Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical
protein R07B1.12 protein.
Length = 212
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/60 (45%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Frame = +3
Query: 90 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVEL-RGKKIKLQIWDLLGR 266
+K+L+IGD GVGKT I+ RF N F++ + +TIG+DF +K + + + LQIWD+ G+
Sbjct: 12 YKVLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKILPVDENTVVHLQIWDISGQ 71
Score = 49.2 bits (112), Expect = 3e-06
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Frame = +2
Query: 257 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHA----NEDVEKMILG 424
+GQ+R+ +T YY+ A ++V D T E+T + ++W ++D+ V ++L
Sbjct: 69 SGQDRYGVMTRVYYKDAHAAIIVLDSTRERTIEGALRWKTDLDQKVTLADGSPVPAILLA 128
Query: 425 NKCDMEEK 448
NKCD++ K
Sbjct: 129 NKCDIDNK 136
>DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GLO-1
protein.
Length = 212
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/60 (45%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Frame = +3
Query: 90 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVEL-RGKKIKLQIWDLLGR 266
+K+L+IGD GVGKT I+ RF N F++ + +TIG+DF +K + + + LQIWD+ G+
Sbjct: 12 YKVLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKILPVDENTVVHLQIWDISGQ 71
Score = 49.2 bits (112), Expect = 3e-06
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Frame = +2
Query: 257 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHA----NEDVEKMILG 424
+GQ+R+ +T YY+ A ++V D T E+T + ++W ++D+ V ++L
Sbjct: 69 SGQDRYGVMTRVYYKDAHAAIIVLDSTRERTIEGALRWKTDLDQKVTLADGSPVPAILLA 128
Query: 425 NKCDMEEK 448
NKCD++ K
Sbjct: 129 NKCDIDNK 136
>U68253-1|AAB16968.1| 65|Caenorhabditis elegans rab6-like protein.
Length = 65
Score = 59.3 bits (137), Expect = 3e-09
Identities = 27/54 (50%), Positives = 37/54 (68%)
Frame = +3
Query: 90 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIW 251
FKL+ +G+ VGKT I+ RF + F T+ +TIGIDF KT+ L + I+LQIW
Sbjct: 12 FKLVFLGEQSVGKTSIITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQIW 65
>Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical
protein C25D7.7 protein.
Length = 181
Score = 58.4 bits (135), Expect = 5e-09
Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Frame = +2
Query: 182 DDRYRLQNKDSGIKG*ENKAPDMGPAGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDI 361
+D YR K+ + G + + AG E+F ++ Y + G ++VY IT+++TF DI
Sbjct: 37 EDFYR---KEIEVDGQPSVLEILDTAGTEQFSSMRDLYIKNGQGFVVVYSITSQQTFHDI 93
Query: 362 VKWLRNIDE-HANEDVEKMILGNKCDMEEKRVVSKERGEAIAREHGIRF 505
I +E+V +++GNKCD+ +R V E G A+A F
Sbjct: 94 RNMKEQIVRVKGSENVPILLVGNKCDLSHQRQVRSEEGLALAESWSCPF 142
Score = 37.9 bits (84), Expect = 0.008
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +3
Query: 90 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDLLG 263
FK++++G GVGK+ + +F + F + TI DF K +E+ G+ L+I D G
Sbjct: 4 FKVVVLGSGGVGKSALTVQFVSSTFIEKYDPTIE-DFYRKEIEVDGQPSVLEILDTAG 60
>Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical
protein W03C9.3 protein.
Length = 209
Score = 57.6 bits (133), Expect = 9e-09
Identities = 23/60 (38%), Positives = 40/60 (66%)
Frame = +3
Query: 87 LFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDLLGR 266
L K++++GDSGVGKT ++ ++ + F+ + +TIG DF + V + + + LQIWD G+
Sbjct: 9 LLKVIILGDSGVGKTSLMNQYVNRRFSNQYKATIGADFLTRDVNIDDRTVTLQIWDTAGQ 68
Score = 55.6 bits (128), Expect = 4e-08
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Frame = +2
Query: 257 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKW----LRNIDEHANEDVEKMILG 424
AGQERF ++ ++YRGA +L +D+TN +F + W L + ++LG
Sbjct: 66 AGQERFQSLGVAFYRGADCCVLAFDVTNAASFKSLDSWRDEFLIQASPRDPDHFPFVLLG 125
Query: 425 NKCDMEEKRVVSKERGEAIAREHG 496
NK D+E +R VS +R ++ + G
Sbjct: 126 NKVDLESQRAVSSKRAQSWCQTKG 149
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 499 PLHETSAKANINIDRAFSELAEAILDKTAGREADADHFP 615
P +E SAK +N++ AF +A L + + D FP
Sbjct: 152 PYYEVSAKEALNVEAAFLAIARDALARESQETNDFPEFP 190
>U68254-1|AAB16969.1| 67|Caenorhabditis elegans rab6-like protein.
Length = 67
Score = 57.6 bits (133), Expect = 9e-09
Identities = 24/55 (43%), Positives = 38/55 (69%)
Frame = +3
Query: 90 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWD 254
F+L+ +G+ VGKT ++ RF + F T+ +TIGIDF KT+ L + ++LQ+WD
Sbjct: 11 FELVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQMWD 65
>AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical
protein Y11D7A.4 protein.
Length = 248
Score = 56.4 bits (130), Expect = 2e-08
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Frame = +2
Query: 260 GQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANED---VEKMILGNK 430
GQ + Y GA + LVYD+TN K+F++ V WL + ++ V+ +++GNK
Sbjct: 94 GQSIAGEMIDKYLTGANIVFLVYDVTNSKSFENAVDWLSVVKKNTKSSETPVKLVLMGNK 153
Query: 431 CDMEEKRVVSKE 466
D+EE+RVVS E
Sbjct: 154 TDLEERRVVSVE 165
Score = 49.6 bits (113), Expect = 2e-06
Identities = 21/66 (31%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Frame = +3
Query: 81 DLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVEL-RGKKIKLQIWDL 257
D + K++++GD GKT I RF+ F ++ T+G+DF + + L ++ +Q+WD+
Sbjct: 33 DKVIKIVVVGDGASGKTSICQRFAKESFDKSYHQTLGLDFFSRRITLPHEMQVLVQVWDI 92
Query: 258 LGRSVS 275
G+S++
Sbjct: 93 GGQSIA 98
>U68264-1|AAB16979.1| 66|Caenorhabditis elegans S10-like protein.
Length = 66
Score = 55.6 bits (128), Expect = 4e-08
Identities = 22/63 (34%), Positives = 41/63 (65%), Gaps = 4/63 (6%)
Frame = +2
Query: 257 AGQERFH-TITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEH---ANEDVEKMILG 424
AGQER+ +I YYR ++ VYD+T ++F+D+ W++ ++H + +V ++++G
Sbjct: 4 AGQERYRQSIVAHYYRNVNAVVFVYDVTCRESFNDLALWIKECEKHGLVGDSEVPRILIG 63
Query: 425 NKC 433
NKC
Sbjct: 64 NKC 66
>Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical
protein F17C8.4 protein.
Length = 211
Score = 52.0 bits (119), Expect = 4e-07
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Frame = +2
Query: 257 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNI-DEHANEDVEKMILGNKC 433
AGQE F + Y RG G +LV+ +T K+F++ K + + +++ NK
Sbjct: 73 AGQEEFSAMREQYIRGGRGFLLVFSVTERKSFEEAHKLYNQVLRVKDRSEYPVLLVANKV 132
Query: 434 DMEEKRVVSKERGEAIAREHGIRFMRRRLK 523
D+ +RVVS++ G +A + + ++ K
Sbjct: 133 DLINQRVVSEQEGRELAAQLKLMYIETSAK 162
Score = 36.7 bits (81), Expect = 0.017
Identities = 20/68 (29%), Positives = 35/68 (51%)
Frame = +3
Query: 90 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDLLGRS 269
+KL++IGD GVGK+ + +F F + TI D I+ E+ G + + + D G+
Sbjct: 18 YKLVVIGDGGVGKSSLTIQFFQKQFVDYYDPTIE-DQYIQHCEIDGNWVIMDVLDTAGQE 76
Query: 270 VSTPSRRR 293
+ R +
Sbjct: 77 EFSAMREQ 84
>U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding
protein protein.
Length = 211
Score = 52.0 bits (119), Expect = 4e-07
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Frame = +2
Query: 257 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNI-DEHANEDVEKMILGNKC 433
AGQE F + Y RG G +LV+ +T K+F++ K + + +++ NK
Sbjct: 73 AGQEEFSAMREQYIRGGRGFLLVFSVTERKSFEEAHKLYNQVLRVKDRSEYPVLLVANKV 132
Query: 434 DMEEKRVVSKERGEAIAREHGIRFMRRRLK 523
D+ +RVVS++ G +A + + ++ K
Sbjct: 133 DLINQRVVSEQEGRELAAQLKLMYIETSAK 162
Score = 36.7 bits (81), Expect = 0.017
Identities = 20/68 (29%), Positives = 35/68 (51%)
Frame = +3
Query: 90 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDLLGRS 269
+KL++IGD GVGK+ + +F F + TI D I+ E+ G + + + D G+
Sbjct: 18 YKLVVIGDGGVGKSSLTIQFFQKQFVDYYDPTIE-DQYIQHCEIDGNWVIMDVLDTAGQE 76
Query: 270 VSTPSRRR 293
+ R +
Sbjct: 77 EFSAMREQ 84
>U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding
protein protein.
Length = 212
Score = 52.0 bits (119), Expect = 4e-07
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMIL-GNKC 433
AGQE F T+ Y R G ++V+ +T+ +F+++ K I + D +IL GNK
Sbjct: 73 AGQEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLHELICRIKDRDDFPIILVGNKA 132
Query: 434 DMEEKRVVSKERGEAIAREHGIRFM 508
D+E +R V++ E +A I ++
Sbjct: 133 DLENERHVARHEAEELAHRLSIPYL 157
>U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog
protein.
Length = 212
Score = 52.0 bits (119), Expect = 4e-07
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMIL-GNKC 433
AGQE F T+ Y R G ++V+ +T+ +F+++ K I + D +IL GNK
Sbjct: 73 AGQEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLHELICRIKDRDDFPIILVGNKA 132
Query: 434 DMEEKRVVSKERGEAIAREHGIRFM 508
D+E +R V++ E +A I ++
Sbjct: 133 DLENERHVARHEAEELAHRLSIPYL 157
>L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 192
Score = 52.0 bits (119), Expect = 4e-07
Identities = 20/58 (34%), Positives = 38/58 (65%)
Frame = +3
Query: 93 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDLLGR 266
KL+++GD GKTC+L FS + F ++ T+ ++ + +E+ GK+++L +WD G+
Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPDVYVPTVFENY-VADIEVDGKQVELALWDTAGQ 63
>CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical
protein C44C11.1a protein.
Length = 212
Score = 52.0 bits (119), Expect = 4e-07
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMIL-GNKC 433
AGQE F T+ Y R G ++V+ +T+ +F+++ K I + D +IL GNK
Sbjct: 73 AGQEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLHELICRIKDRDDFPIILVGNKA 132
Query: 434 DMEEKRVVSKERGEAIAREHGIRFM 508
D+E +R V++ E +A I ++
Sbjct: 133 DLENERHVARHEAEELAHRLSIPYL 157
>AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical
protein Y51H4A.3 protein.
Length = 192
Score = 52.0 bits (119), Expect = 4e-07
Identities = 20/58 (34%), Positives = 38/58 (65%)
Frame = +3
Query: 93 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDLLGR 266
KL+++GD GKTC+L FS + F ++ T+ ++ + +E+ GK+++L +WD G+
Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPDVYVPTVFENY-VADIEVDGKQVELALWDTAGQ 63
>AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-related
gtpase) homologprotein 1 protein.
Length = 213
Score = 52.0 bits (119), Expect = 4e-07
Identities = 36/116 (31%), Positives = 56/116 (48%), Gaps = 2/116 (1%)
Frame = +2
Query: 185 DRYRLQNKDSGIKG*ENKAPDMGPAGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIV 364
D YR K + G E + AGQE + I +YYR G + V+ I + ++F+
Sbjct: 52 DSYR---KKVVLDGEECSIDILDTAGQEDYSAIRDNYYRSGEGFICVFSILDMESFEATN 108
Query: 365 KWLRNIDEHANED--VEKMILGNKCDMEEKRVVSKERGEAIAREHGIRFMRRRLKR 526
++ I N D V +++GNK DM ++RVVS E A + G ++ KR
Sbjct: 109 EFREQILRVKNSDSSVPIVLVGNKGDMRDQRVVSAELCRQRAEQWGCHYVETSAKR 164
>U68261-1|AAB16976.1| 53|Caenorhabditis elegans rab19-like
protein.
Length = 53
Score = 51.2 bits (117), Expect = 8e-07
Identities = 22/48 (45%), Positives = 35/48 (72%)
Frame = +3
Query: 78 YDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVEL 221
Y LFK++L+ ++GVGKTC++ +F+ F +TIG+DF IKTV++
Sbjct: 4 YKYLFKVVLVPNAGVGKTCLVRKFTQGIFPPGQSATIGVDFMIKTVKV 51
>Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical
protein C08F8.7 protein.
Length = 205
Score = 50.4 bits (115), Expect = 1e-06
Identities = 29/107 (27%), Positives = 52/107 (48%)
Frame = +2
Query: 170 DFYFDDRYRLQNKDSGIKG*ENKAPDMGPAGQERFHTITTSYYRGAMGIMLVYDITNEKT 349
D +D YR K S + + + AG E+F + +YYR A G +LV+ + T
Sbjct: 33 DATIEDSYR---KLSKVDAENARLEILDTAGTEQFTGMRETYYRTAQGFVLVFSLAETST 89
Query: 350 FDDIVKWLRNIDEHANEDVEKMILGNKCDMEEKRVVSKERGEAIARE 490
F+++ + +I ++V +++GNK D+ E R V + A +
Sbjct: 90 FENLKQTFTDIIAIRGKEVPMILVGNKSDLAETRQVDESEAHNFAEK 136
>Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical
protein ZK792.6 protein.
Length = 184
Score = 48.4 bits (110), Expect = 5e-06
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +2
Query: 257 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDE-HANEDVEKMILGNKC 433
AGQE + + Y R G +LV+ + K+F+++ + I ++DV +++GNKC
Sbjct: 59 AGQEEYSAMRDQYMRTGEGFLLVFAVNEAKSFENVANYREQIRRVKDSDDVPMVLVGNKC 118
Query: 434 DMEEKRVVSKERGEAIAREHGI 499
D+ + V + E A+ +GI
Sbjct: 119 DLSSRSVDFRTVSET-AKGYGI 139
Score = 41.1 bits (92), Expect = 8e-04
Identities = 20/59 (33%), Positives = 33/59 (55%)
Frame = +3
Query: 90 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDLLGR 266
+KL+++GD GVGK+ + + NHF + TI ++ K V + G+ L I D G+
Sbjct: 4 YKLVVVGDGGVGKSALTIQLIQNHFVEEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQ 61
>M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein
protein.
Length = 187
Score = 48.4 bits (110), Expect = 5e-06
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +2
Query: 257 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDE-HANEDVEKMILGNKC 433
AGQE + + Y R G +LV+ + K+F+++ + I ++DV +++GNKC
Sbjct: 62 AGQEEYSAMRDQYMRTGEGFLLVFAVNEAKSFENVANYREQIRRVKDSDDVPMVLVGNKC 121
Query: 434 DMEEKRVVSKERGEAIAREHGI 499
D+ + V + E A+ +GI
Sbjct: 122 DLSSRSVDFRTVSET-AKGYGI 142
Score = 41.1 bits (92), Expect = 8e-04
Identities = 20/59 (33%), Positives = 33/59 (55%)
Frame = +3
Query: 90 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDLLGR 266
+KL+++GD GVGK+ + + NHF + TI ++ K V + G+ L I D G+
Sbjct: 7 YKLVVVGDGGVGKSALTIQLIQNHFVEEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQ 64
>CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical
protein C44C11.1b protein.
Length = 168
Score = 47.6 bits (108), Expect = 9e-06
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Frame = +2
Query: 257 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMIL-GNKC 433
AGQE F T+ Y R G ++V+ +T+ +F+++ K I + D +IL GNK
Sbjct: 73 AGQEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLHELICRIKDRDDFPIILVGNKA 132
Query: 434 DMEEKRVVSKE 466
D+E +R VS E
Sbjct: 133 DLENERHVSFE 143
>Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical
protein K03D3.10 protein.
Length = 195
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = +3
Query: 93 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDLLGR 266
K +++GD VGKTC+L ++ N F +I T+ D V + G+ I L +WD G+
Sbjct: 5 KCVVVGDGAVGKTCLLLSYTTNAFPGEYILTV-FDTYSTNVMVDGRPINLSLWDTAGQ 61
>U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein.
Length = 195
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = +3
Query: 93 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDLLGR 266
K +++GD VGKTC+L ++ N F +I T+ D V + G+ I L +WD G+
Sbjct: 5 KCVVVGDGAVGKTCLLLSYTTNAFPGEYILTV-FDTYSTNVMVDGRPINLSLWDTAGQ 61
>Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical
protein F54C8.5 protein.
Length = 207
Score = 46.0 bits (104), Expect = 3e-05
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVK-WLRNIDEHANEDVEKMILGNKC 433
AGQ+ + S G +LVY I + K+F+ + + + + + + +I+GNK
Sbjct: 69 AGQQEYTVFPRSCSLDINGFILVYAIDDRKSFEMCSNIYEKIVRTYGDTSIPIVIVGNKT 128
Query: 434 DMEEKRVVSKERGEAIAREHGIRFM 508
D+ +RVV E GE +AR+ +F+
Sbjct: 129 DLSTQRVVRAEEGEELARQWDAKFV 153
Score = 28.3 bits (60), Expect = 6.1
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +3
Query: 93 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDLLGRSV 272
K+ ++G VGK+ ++ RF+ N F + STI D K + + L++ D G+
Sbjct: 15 KVAVMGYPHVGKSALVLRFTQNIFPERYESTIE-DQHSKHIAAFHRDYHLRVTDTAGQQE 73
Query: 273 ST 278
T
Sbjct: 74 YT 75
>X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-related
protein protein.
Length = 191
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = +3
Query: 93 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDLLGR 266
K +++GD VGKTC+L ++ N F +I T+ D V + G+ I L +WD G+
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGRPINLGLWDTAGQ 61
>L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = +3
Query: 93 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDLLGR 266
K +++GD VGKTC+L ++ N F +I T+ D V + G+ I L +WD G+
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGRPINLGLWDTAGQ 61
>L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = +3
Query: 93 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDLLGR 266
K +++GD VGKTC+L ++ N F +I T+ D V + G+ I L +WD G+
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGRPINLGLWDTAGQ 61
>AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse
engulfment proteinCED-10 protein.
Length = 191
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = +3
Query: 93 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDLLGR 266
K +++GD VGKTC+L ++ N F +I T+ D V + G+ I L +WD G+
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGRPINLGLWDTAGQ 61
>AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death
abnormality protein10, isoform b protein.
Length = 191
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = +3
Query: 93 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDLLGR 266
K +++GD VGKTC+L ++ N F +I T+ D V + G+ I L +WD G+
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGRPINLGLWDTAGQ 61
>AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death
abnormality protein10, isoform a protein.
Length = 129
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = +3
Query: 93 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDLLGR 266
K +++GD VGKTC+L ++ N F +I T+ D V + G+ I L +WD G+
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGRPINLGLWDTAGQ 61
>Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical
protein K01G5.4 protein.
Length = 215
Score = 45.2 bits (102), Expect = 5e-05
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +3
Query: 90 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDLLGR 266
FKL+L+GD G GKT + R F +++T+G++ +I+ +WD G+
Sbjct: 10 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQIRFNVWDTAGQ 68
Score = 44.8 bits (101), Expect = 7e-05
Identities = 19/69 (27%), Positives = 41/69 (59%)
Frame = +2
Query: 257 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCD 436
AGQE+F + YY ++++D+T T+ ++ W R++ E++ ++ GNK D
Sbjct: 66 AGQEKFGGLRDGYYIQGQCAIIMFDVTARVTYKNVPNWHRDL-ARVCENIPIVLCGNKVD 124
Query: 437 MEEKRVVSK 463
+++++V +K
Sbjct: 125 VKDRKVKAK 133
>Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical
protein F54C9.10 protein.
Length = 180
Score = 45.2 bits (102), Expect = 5e-05
Identities = 26/63 (41%), Positives = 37/63 (58%)
Frame = +3
Query: 93 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDLLGRSV 272
++L++G G GKT IL+R TT I TIG F ++ VE K +K Q+WDL G++
Sbjct: 18 RILILGLDGAGKTTILYRLQVGEVVTT-IPTIG--FNVEQVEY--KNLKFQVWDLGGQTS 72
Query: 273 STP 281
P
Sbjct: 73 IRP 75
>U28733-4|AAA68305.2| 125|Caenorhabditis elegans Di-ras/rig/noey2
ras-like proteinhomolog protein 1 protein.
Length = 125
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Frame = +2
Query: 317 MLVYDITNEKTFDD---IVKWLRNIDEHANEDVEKMILGNKCDMEEKRVVSKERGEAIAR 487
+L+Y +TN+++F + I++ ++ + +A + M++GNK D E KR VS G+ +A
Sbjct: 13 ILIYSVTNKQSFAELVPIIEMMKEVKGNAIAETPIMLVGNKKDEESKREVSSNSGQKVAT 72
Query: 488 EHGIRFMRRRLKRT*I*TEL 547
F+ K TEL
Sbjct: 73 NMECGFIETSAKNNENITEL 92
>U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical
protein R07G3.1 protein.
Length = 191
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/58 (31%), Positives = 36/58 (62%)
Frame = +3
Query: 93 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDLLGR 266
K +++GD VGKTC+L ++ N F + ++ T+ ++ + TV + G+ L ++D G+
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQ 61
>L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 188
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/58 (31%), Positives = 36/58 (62%)
Frame = +3
Query: 93 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDLLGR 266
K +++GD VGKTC+L ++ N F + ++ T+ ++ + TV + G+ L ++D G+
Sbjct: 2 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQ 58
>AF067623-4|AAC17556.2| 393|Caenorhabditis elegans Hypothetical
protein T26C12.3 protein.
Length = 393
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Frame = +2
Query: 311 GIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMIL-GNKCDMEEKRVVSKERGEAIAR 487
GI+++Y + + ++F + + + EH+ E + ++L G+K DM KRVV+ G+ +AR
Sbjct: 291 GIIIMYSVVDRQSFYHAAEIFKRL-EHSREHNQPIVLVGSKKDMRVKRVVTSFEGQQLAR 349
Query: 488 EHGIRFM 508
GI F+
Sbjct: 350 TLGIPFL 356
>Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical
protein C35C5.4 protein.
Length = 195
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/58 (29%), Positives = 34/58 (58%)
Frame = +3
Query: 93 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDLLGR 266
K +++GD VGKTC+L ++ + F ++ T+ ++ + + L G + L +WD G+
Sbjct: 9 KCVVVGDGTVGKTCMLISYTTDSFPVQYVPTVFDNYSAQ-MSLDGNVVNLGLWDTAGQ 65
>U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase
protein.
Length = 195
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/58 (29%), Positives = 34/58 (58%)
Frame = +3
Query: 93 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDLLGR 266
K +++GD VGKTC+L ++ + F ++ T+ ++ + + L G + L +WD G+
Sbjct: 9 KCVVVGDGTVGKTCMLISYTTDSFPVQYVPTVFDNYSAQ-MSLDGNVVNLGLWDTAGQ 65
>S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog
protein.
Length = 191
Score = 41.5 bits (93), Expect = 6e-04
Identities = 17/58 (29%), Positives = 35/58 (60%)
Frame = +3
Query: 93 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDLLGR 266
K +++GD VGKTC+L ++ N F + ++ T+ ++ + T + G+ L ++D G+
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TAMIGGEPYTLGLFDTAGQ 61
>AC024853-3|ABP57809.1| 244|Caenorhabditis elegans Hypothetical
protein Y71F9AR.2 protein.
Length = 244
Score = 41.5 bits (93), Expect = 6e-04
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Frame = +2
Query: 317 MLVYDITNEKTFDDIVKWLRNIDEHAN----EDVEKMILGNKCDMEEKRVVSKERGEAIA 484
++VYD+T++ +F L I H + + +++GNK D+E R VS+ GE +A
Sbjct: 83 VVVYDVTSQLSFQYAEGILERISRHEHVLCPREHRTLLVGNKTDLERYRQVSETEGERLA 142
Query: 485 REHGIRF 505
+H +F
Sbjct: 143 SQHKAQF 149
>Z71180-2|CAA94890.1| 207|Caenorhabditis elegans Hypothetical
protein F22E12.2 protein.
Length = 207
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/69 (28%), Positives = 39/69 (56%)
Frame = +3
Query: 63 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKL 242
MAK+ + K + +G++ VGKT ++ ++ N + ++ T +F + V + K I+L
Sbjct: 1 MAKEEDEKCLKCIFVGNAAVGKTSMIVSYTTNVYPHNYVPTAFDNFSV-VVLVDKKPIRL 59
Query: 243 QIWDLLGRS 269
Q+ D G+S
Sbjct: 60 QLHDTAGQS 68
Score = 35.1 bits (77), Expect = 0.053
Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Frame = +2
Query: 257 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIV-KWLRNIDEHANEDVEKMILGNKC 433
AGQ F T+ Y A ++VY + + ++F+D+ W + + N + +++G +
Sbjct: 65 AGQSSFDTLRPLCYTDADVFVIVYSVVDLQSFEDVSHHWYPEVTKR-NPGTKLILVGTQA 123
Query: 434 DME---EKRVVSKERGEAIAREHGIRF 505
D V++ RG+A+A G F
Sbjct: 124 DQRWQVRGNTVTQLRGKALADRLGAEF 150
>U66216-1|AAB07465.1| 128|Caenorhabditis elegans RAN/Tc4 protein.
Length = 128
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/67 (23%), Positives = 38/67 (56%)
Frame = +2
Query: 263 QERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCDME 442
QE+F + YY ++++D+T T+ ++ W ++ E++ ++ GNK D++
Sbjct: 2 QEKFGGLRDGYYIQGQCAIIMFDVTARVTYKNVPNWHHDL-ARVCENIPIVLCGNKVDVK 60
Query: 443 EKRVVSK 463
+++V +K
Sbjct: 61 DRKVKAK 67
>U68263-1|AAB16978.1| 115|Caenorhabditis elegans rab-like protein.
Length = 115
Score = 38.3 bits (85), Expect = 0.006
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Frame = +3
Query: 93 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTV--ELRGKK--IKLQIWDLL 260
K++++GDSGVGKT I++R +TIG F V + R ++ ++LQ+WD
Sbjct: 54 KVVVLGDSGVGKTSIIYRHRYGAHYRPVNATIGASFVSFDVGADYRDREDVVRLQMWDTA 113
Query: 261 GR 266
G+
Sbjct: 114 GQ 115
>U50301-3|AAM29676.1| 370|Caenorhabditis elegans Hypothetical
protein F20D6.8 protein.
Length = 370
Score = 37.1 bits (82), Expect = 0.013
Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Frame = +2
Query: 278 TITTSYYRGAMGIMLV-YDITNEKTFDDIVKWLRNID-EHANEDV--EKMILGNKCDMEE 445
T+ S +R + + +V Y++ N ++F + L I + N V + ++GNKCD++
Sbjct: 234 TLENSPFRQSKTLYIVMYNMDNRQSFIYATQILERITLANLNNPVPLQLFLIGNKCDLKR 293
Query: 446 KRVVSKERGEAIAREHGIRFM 508
+V+S G+++AR F+
Sbjct: 294 NQVISTNEGKSVARTFKCDFL 314
>U97592-7|AAB52874.2| 332|Caenorhabditis elegans Sperm-specific
family, class rprotein 2 protein.
Length = 332
Score = 36.3 bits (80), Expect = 0.023
Identities = 21/72 (29%), Positives = 41/72 (56%)
Frame = +3
Query: 90 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDLLGRS 269
++L+++G + VGKT I+ R+ N F++ + TI D + ++G + L D+L +
Sbjct: 18 YRLVVLGSAKVGKTNIIRRYLYNEFSSKYKETIE-DLHSREFRIQGVPLPL---DILDTN 73
Query: 270 VSTPSRRRITAA 305
+ P RR++ A
Sbjct: 74 FNFPDMRRLSIA 85
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +2
Query: 314 IMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCDMEEKRV 454
+ V D+T+ K DI + + + NE + +++GNKCD+E K++
Sbjct: 93 VFSVDDVTSFKEMSDIWQEICSRRSDLNE-LPIVVVGNKCDVENKKI 138
>U68255-1|AAB16970.1| 70|Caenorhabditis elegans rab7-like protein.
Length = 70
Score = 36.3 bits (80), Expect = 0.023
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 9/62 (14%)
Frame = +3
Query: 87 LFKLLLIGDSGVGKTCILFRFS---------DNHFTTTFISTIGIDFKIKTVELRGKKIK 239
L K++++GDSGVGKT ++ ++ + F + +TIG DF + V + + +
Sbjct: 9 LLKVIILGDSGVGKTSLMNQYEIGDLMNQYVNRRFMNQYKATIGADFLTRDVNIDDRTVT 68
Query: 240 LQ 245
LQ
Sbjct: 69 LQ 70
>AL117204-37|CAB55148.2| 248|Caenorhabditis elegans Hypothetical
protein Y116A8C.10b protein.
Length = 248
Score = 35.1 bits (77), Expect = 0.053
Identities = 11/31 (35%), Positives = 24/31 (77%)
Frame = +2
Query: 293 YYRGAMGIMLVYDITNEKTFDDIVKWLRNID 385
++ GA+G +LV+D+TN+++ +++ WL +D
Sbjct: 86 FFEGAVGAILVHDLTNKRSEENLATWLTMLD 116
>AF098999-2|AAC68728.3| 369|Caenorhabditis elegans Hypothetical
protein W04C9.5 protein.
Length = 369
Score = 35.1 bits (77), Expect = 0.053
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 320 LVYDITNEKTFDDIVKWL-RNIDEHANEDVEKMILGNKCDMEEKRVVSKERGEAIAREHG 496
+VY++ N ++F L R ++ +++GNK D++ VVSK G +A+ H
Sbjct: 249 IVYNVDNRESFVCATDLLSRLLNRKIARGANIILIGNKIDLKRNTVVSKMEGACLAKVHK 308
Query: 497 IRFM 508
F+
Sbjct: 309 CNFV 312
>Z66561-1|CAA91454.1| 635|Caenorhabditis elegans Hypothetical
protein F08G12.1 protein.
Length = 635
Score = 33.1 bits (72), Expect = 0.21
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +3
Query: 93 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKK--IKLQIWDLLGR 266
K+++ GD VGKTC+ R F +++T I R +K+ +WD++ +
Sbjct: 45 KIVIRGDRNVGKTCLWKRLQGLSFQEEYVATEEIQVANINWNYRATDDVVKVDVWDIVDQ 104
Query: 267 S 269
S
Sbjct: 105 S 105
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = +2
Query: 296 YRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCDMEEKRVVS 460
Y+G G++ V+DIT T++ + K + + + ++L N+ DM R V+
Sbjct: 143 YKGTNGVIFVFDITKTWTWEYVQKEIVKVP----NKIPVLVLANRRDMGHHRQVT 193
>U23938-1|AAA65452.1| 35|Caenorhabditis elegans pra-1 protein.
Length = 35
Score = 32.7 bits (71), Expect = 0.28
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +3
Query: 99 LLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFK 203
L+IG+SGVGK+ ++ RF D+ +IG+ F+
Sbjct: 1 LIIGESGVGKSSLMLRFVDDVVDPERAVSIGVPFR 35
>AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical
protein Y32F6B.3 protein.
Length = 187
Score = 32.7 bits (71), Expect = 0.28
Identities = 14/58 (24%), Positives = 33/58 (56%)
Frame = +3
Query: 93 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDLLGR 266
KL+++GD+ GKT +L ++ F + +T+ ++ + +V + K + ++D G+
Sbjct: 6 KLVVVGDTYTGKTSLLVAYTKKQFLDNYTTTVFDNWAV-SVHIDNKNYAVNLFDTAGQ 62
>AL032654-6|CAB54465.1| 467|Caenorhabditis elegans Hypothetical
protein Y52B11A.4 protein.
Length = 467
Score = 32.3 bits (70), Expect = 0.37
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +2
Query: 317 MLVYDITNEKTFDDIVKWLRNI-DEHANEDVEKMILGNKCDMEEKRVVSKERGEA 478
++VY I ++ ++ + L I D ++ ++ GNK D+E KR V+K+ A
Sbjct: 309 LVVYSIDSKSSWKQAMVALEMIRDRPGTRNLPTLVAGNKIDLERKRTVTKQEVRA 363
>Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical
protein ZK1320.6 protein.
Length = 539
Score = 31.9 bits (69), Expect = 0.49
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +3
Query: 93 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDLLG 263
+++L+G G GKT I+ R T I F I+T+ K +L WD+ G
Sbjct: 371 RVVLLGLDGAGKTSIVRRLKKVQMDTVMAPHPTIGFNIETIHY--KNYRLNFWDVGG 425
>Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical
protein F19H8.3 protein.
Length = 184
Score = 31.5 bits (68), Expect = 0.65
Identities = 22/63 (34%), Positives = 31/63 (49%)
Frame = +3
Query: 93 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDLLGRSV 272
++LL+G GKT IL + S T G F +KTV G I+L +WD+ G+
Sbjct: 19 RILLLGLDNAGKTTILKQLSSED-VQHVTPTKG--FNVKTVAAMG-DIRLNVWDIGGQRS 74
Query: 273 STP 281
P
Sbjct: 75 IRP 77
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Frame = +2
Query: 260 GQERFHTITTSYYRGAMGIMLVYDITNEKTFDDI-VKWLRNIDEHANEDVEKMILGNKCD 436
GQ ++YY ++ V D ++K FD++ ++ +DE V +I NK D
Sbjct: 71 GQRSIRPYWSNYYENIDTLIFVIDSNDKKRFDEMNIELGELLDEEKLRKVPVLIFANKQD 130
Query: 437 MEEKRVVSKERGEAIAREHGIRFMRRR 517
+ V+ E I R+ + +R R
Sbjct: 131 L-----VTAASSEEITRKLNLDLLRDR 152
>Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical
protein C38D4.8 protein.
Length = 190
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/64 (25%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = +2
Query: 257 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEH---ANEDVEKMILGN 427
AGQ ++ + SY+ + G++ V D ++ + + L + EH + + +IL N
Sbjct: 71 AGQMKYRSTWESYFHSSQGVIFVLDSSDRLRMELLKDELMMVMEHKDVVSRGIPIVILAN 130
Query: 428 KCDM 439
K D+
Sbjct: 131 KMDI 134
>AC087079-5|ABC48240.1| 367|Caenorhabditis elegans Hypothetical
protein Y37E3.5b protein.
Length = 367
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/82 (23%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = +2
Query: 260 GQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNI--DEHANEDVEKMILGNKC 433
G + I ++YY GI+ V D + ++TF + ++ L ++ + H + ++L N+
Sbjct: 78 GDKGIRGIWSNYYAEVHGIIYVIDYSTDETFTESIEALHSLTSNPHVQKKPIFLLLNNQN 137
Query: 434 DMEEKRVVSKERGEAIAREHGI 499
+ E V + A +H I
Sbjct: 138 NREFDDVEISNETKIQAGQHKI 159
>AC087079-4|ABC48239.1| 370|Caenorhabditis elegans Hypothetical
protein Y37E3.5a protein.
Length = 370
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/82 (23%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = +2
Query: 260 GQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNI--DEHANEDVEKMILGNKC 433
G + I ++YY GI+ V D + ++TF + ++ L ++ + H + ++L N+
Sbjct: 78 GDKGIRGIWSNYYAEVHGIIYVIDYSTDETFTESIEALHSLTSNPHVQKKPIFLLLNNQN 137
Query: 434 DMEEKRVVSKERGEAIAREHGI 499
+ E V + A +H I
Sbjct: 138 NREFDDVEISNETKIQAGQHKI 159
>AC024812-5|AAF59556.1| 191|Caenorhabditis elegans Hypothetical
protein Y54E10BR.2 protein.
Length = 191
Score = 29.1 bits (62), Expect = 3.5
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Frame = +2
Query: 245 DMGPAGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEK---M 415
D+G GQE + +YY A ++ V D T F + + + ANE V+ +
Sbjct: 75 DLG--GQESLRELWATYYDDANAMIFVVDATRSDLFPIVASQFKEV--MANEIVQNIPVL 130
Query: 416 ILGNKCDMEEKRVVSKER 469
+ NK +ME ++ R
Sbjct: 131 VAVNKSEMEGAAAAAEVR 148
>Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical
protein Y57G11C.13 protein.
Length = 185
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/58 (24%), Positives = 29/58 (50%)
Frame = +3
Query: 93 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDLLGR 266
+L L+G GKT + + FT I T+G + + ++ + +++WD+ G+
Sbjct: 22 ELTLVGLQNSGKTTFVNVIASGQFTEDMIPTVGFNMR----KITKGNVTIKLWDIGGQ 75
>Z75531-6|CAA99807.1| 1144|Caenorhabditis elegans Hypothetical
protein C54D10.7 protein.
Length = 1144
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = +2
Query: 338 NEKTFDDIVKWLRNIDEHANEDVEKMILGNKCDMEEKRVVSKERGEAIAREHGIR 502
N K+ + + + D+ +E+++ M + + M+E R SKE E EH ++
Sbjct: 82 NNKSIEKLRAQFKEQDDKYDEEMKSMNIAHDLKMKELRSESKEAREKAEMEHKMK 136
>AL032618-1|CAB63366.1| 1045|Caenorhabditis elegans Hypothetical
protein Y42A5A.1 protein.
Length = 1045
Score = 28.7 bits (61), Expect = 4.6
Identities = 22/92 (23%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Frame = -2
Query: 280 GVETLLPSRSHIWSFIFLPLNSTVFILKSIPIV--EIKVVVKWLSENL----NNMHVFPT 119
GV + S + I+ F+ +PL S++ +S PI+ +I + + S + N+ + T
Sbjct: 76 GVVAVSMSFALIYFFMIVPLTSSILPSQSSPILPSDISTIYQKSSTDFPIFTNSTELITT 135
Query: 118 PESPMRSSLNNKSY-VFLAILQIYSFYKTDIK 26
E P+ +NN ++ + + + I Y+ ++K
Sbjct: 136 TEDPLYVHINNTNHRLQIPQIHIPLLYEVELK 167
>AC092690-2|AAK73855.2| 745|Caenorhabditis elegans Hypothetical
protein BE0003N10.1 protein.
Length = 745
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/61 (24%), Positives = 29/61 (47%)
Frame = +1
Query: 436 YGGETCCQQGAR*SNSPRARHPLHETSAKANINIDRAFSELAEAILDKTAGREADADHFP 615
Y G + AR + +P E +A++N+ A + + ++ + GRE+ A+H
Sbjct: 166 YNGPLAALRVARTARGDFHVNPTQEELREASLNLIVAMRKHEKTVMIELDGRESSAEHLE 225
Query: 616 H 618
H
Sbjct: 226 H 226
>AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G
protein indispensablefor equal chromosome segregation
protein.
Length = 185
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/58 (24%), Positives = 29/58 (50%)
Frame = +3
Query: 93 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDLLGR 266
+L L+G GKT + + FT I T+G + + ++ + +++WD+ G+
Sbjct: 22 ELTLVGLQNSGKTTFVNVIASGQFTEDMIPTVGFNMR----KITKGNVTIKLWDIGGQ 75
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 28.3 bits (60), Expect = 6.1
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +1
Query: 277 HHHDVVLPRRYGHHARIRH 333
HHHD P R+GHH H
Sbjct: 403 HHHDGRSPSRHGHHHHHHH 421
>AC006659-2|AAF39883.2| 977|Caenorhabditis elegans Hypothetical
protein H16O14.1 protein.
Length = 977
Score = 28.3 bits (60), Expect = 6.1
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = +2
Query: 233 NKAPDMGPAGQERFHTITT----SYYRGAMGIMLVYDITNEKTFDDI 361
N P++G A F+ TT Y GA+ I+L+Y K FDDI
Sbjct: 75 NLGPELGGAVGILFYLGTTIAASMYITGAIEILLLYIYPQAKLFDDI 121
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,565,344
Number of Sequences: 27780
Number of extensions: 357609
Number of successful extensions: 1390
Number of sequences better than 10.0: 110
Number of HSP's better than 10.0 without gapping: 1242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1368
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -