Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0239
         (766 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    25   0.66 
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   2.0  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   6.2  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   6.2  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   6.2  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 25.0 bits (52), Expect = 0.66
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +3

Query: 216 EKVRLDTLDTETGSRRTPDAIHERLPRGTHGDSV 317
           +++RL   D +    R  DAIH  + RG +G ++
Sbjct: 299 DQIRLSLDDMDRWRDRIYDAIHSGVVRGDNGQNI 332


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = -2

Query: 93  PANGEGSLIACITYGSYSFACTEP 22
           P  G G L  C+    +S  C EP
Sbjct: 341 PQEGLGELAVCVNERPWSLYCGEP 364


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 12/54 (22%), Positives = 22/54 (40%)
 Frame = +3

Query: 165 PIKKPNSNQTISSKDLAEKVRLDTLDTETGSRRTPDAIHERLPRGTHGDSVYRY 326
           P+K   S      +D++  V    L +  G R+T +++     +   G  V  Y
Sbjct: 39  PLKTTQSVSVTKDQDVSSSVNRFRLRSRPGHRKTDNSLSATSKKDKDGYKVVCY 92


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = +1

Query: 454 RGWIDLERARWAPGCLELARREQRXKMQHY 543
           R W  L R   A    ELARRE++  MQ Y
Sbjct: 515 RRWHALGREEQAK-YYELARRERQLHMQLY 543


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = +1

Query: 454 RGWIDLERARWAPGCLELARREQRXKMQHY 543
           R W  L R   A    ELARRE++  MQ Y
Sbjct: 407 RRWHALGREEQAK-YYELARRERQLHMQLY 435


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,369
Number of Sequences: 336
Number of extensions: 3504
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)