Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0239
         (766 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    24   4.5  
AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.           23   7.8  

>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = +2

Query: 317 LPVPAQTFSLSSI-THPTTTVAATFKRXMXKLTSYPDSS 430
           LP P  T + +++ T PTTT    +       TS P S+
Sbjct: 243 LPPPPPTTTTTTVWTDPTTTTTTDYTTAYPPTTSEPPST 281


>AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = +2

Query: 320 PVPAQTFSLSSITHPTTTVAATFKRXMXKLTSYPDSS 430
           P P  T + +  T PTTT+   +       T+ P S+
Sbjct: 245 PPPPTTTTTTVWTDPTTTITTDYTTAYPPTTNEPPST 281


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 787,580
Number of Sequences: 2352
Number of extensions: 15501
Number of successful extensions: 31
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79418373
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)