Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0238
(764 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50191-10|AAK31550.2| 1146|Caenorhabditis elegans Hypothetical p... 29 2.7
Z83109-9|CAJ43453.1| 371|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z70684-11|CAA94604.1| 1141|Caenorhabditis elegans Hypothetical p... 29 4.8
Z70682-10|CAA94588.1| 1141|Caenorhabditis elegans Hypothetical p... 29 4.8
AB073210-1|BAB70473.1| 1141|Caenorhabditis elegans rac effector ... 29 4.8
Z74475-3|CAA98957.2| 567|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z66524-9|CAA91422.3| 696|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z66524-8|CAH10782.1| 753|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z66523-11|CAA91417.3| 696|Caenorhabditis elegans Hypothetical p... 28 6.3
Z66523-10|CAH04723.1| 753|Caenorhabditis elegans Hypothetical p... 28 6.3
AF067608-4|AAK95863.2| 473|Caenorhabditis elegans Hypothetical ... 28 6.3
Z74028-3|CAA98425.1| 1908|Caenorhabditis elegans Hypothetical pr... 28 8.4
AL031635-1|CAA21039.2| 487|Caenorhabditis elegans Hypothetical ... 28 8.4
>U50191-10|AAK31550.2| 1146|Caenorhabditis elegans Hypothetical
protein T14B4.1 protein.
Length = 1146
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/85 (21%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = -3
Query: 498 PSRSTLPLKYLWLI*FETKAIVSGVDEYSRL-EGTKIAGFSLILDTISICSNLRWNIWHS 322
P + + + Y + + FE + D+ RL E + A F +L + + + + N W
Sbjct: 696 PKKESRVISYAYSMIFEEEGSYLKKDQVERLDEVVQTARFKAVLLALKLSTVVDGNAWRI 755
Query: 321 EFVKPIIKGMSLPRPCWTRIFGFHL 247
++ I K ++ +R FG +
Sbjct: 756 ALIEEIFKASAIMDQSSSRSFGLSM 780
>Z83109-9|CAJ43453.1| 371|Caenorhabditis elegans Hypothetical
protein F44G3.14 protein.
Length = 371
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = +3
Query: 114 EIHEKLVAMPVEKLNEANRILIDQIGLTTFFPVVETXHPGITTI 245
++ EKL+ V+KL NR+++ ++ V++T +PG T+
Sbjct: 75 DLPEKLLHKIVDKLKNKNRLIVRKVS-RKMREVIDTHNPGFKTL 117
>Z70684-11|CAA94604.1| 1141|Caenorhabditis elegans Hypothetical
protein F28D1.10 protein.
Length = 1141
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = +2
Query: 254 NPNILVQQGRGKDIPLIIGFTNSECHMFQRRFEQIDIVSKINENPAILVPSNLLYSSTPE 433
NP + + G LI +S H +QRR + D N P+ +LY++ E
Sbjct: 185 NPLKKLHEDLGPLNRLIYSALSSVTHTYQRRNKTADSWRTSNVFSLTAAPAQILYAAQTE 244
Query: 434 TIA 442
TIA
Sbjct: 245 TIA 247
>Z70682-10|CAA94588.1| 1141|Caenorhabditis elegans Hypothetical
protein F28D1.10 protein.
Length = 1141
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = +2
Query: 254 NPNILVQQGRGKDIPLIIGFTNSECHMFQRRFEQIDIVSKINENPAILVPSNLLYSSTPE 433
NP + + G LI +S H +QRR + D N P+ +LY++ E
Sbjct: 185 NPLKKLHEDLGPLNRLIYSALSSVTHTYQRRNKTADSWRTSNVFSLTAAPAQILYAAQTE 244
Query: 434 TIA 442
TIA
Sbjct: 245 TIA 247
>AB073210-1|BAB70473.1| 1141|Caenorhabditis elegans rac effector
protein.
Length = 1141
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = +2
Query: 254 NPNILVQQGRGKDIPLIIGFTNSECHMFQRRFEQIDIVSKINENPAILVPSNLLYSSTPE 433
NP + + G LI +S H +QRR + D N P+ +LY++ E
Sbjct: 185 NPLKKLHEDLGPLNRLIYSALSSVTHTYQRRNKTADSWRTSNVFSLTAAPAQILYAAQTE 244
Query: 434 TIA 442
TIA
Sbjct: 245 TIA 247
>Z74475-3|CAA98957.2| 567|Caenorhabditis elegans Hypothetical
protein R04F11.4 protein.
Length = 567
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = -1
Query: 230 GMRCFHHWEKSGKADLINQYSVGFIQFFNRHGDEFLVYLIRISGVDAKDGKQEFVDGLGE 51
G CFHH+EK + L N+ S + NR D+ ++ + +G +Q DG+ E
Sbjct: 72 GALCFHHYEKPYEQQLRNETSRRIGELKNRVMDQ--LWRMSNNGTAYSTWRQTANDGMDE 129
>Z66524-9|CAA91422.3| 696|Caenorhabditis elegans Hypothetical
protein T13H5.1a protein.
Length = 696
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = +2
Query: 410 LLYSSTPETIALVSNQISQRYFNGSVDLEGFINCVPIVTTSTQP*SWP--RRDLRQVMLR 583
L+Y T+ +SNQ SQR++ + +G N P + +P + +VM R
Sbjct: 440 LIYDHACHTVVNLSNQGSQRHYPSFIHNKGKANYGPFIVEIMNYHQYPAMTSHMVKVMKR 499
Query: 584 YFCTSSLTTVTARSSK 631
F S + A++ +
Sbjct: 500 TFMISDIMATGAQNQQ 515
>Z66524-8|CAH10782.1| 753|Caenorhabditis elegans Hypothetical
protein T13H5.1b protein.
Length = 753
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = +2
Query: 410 LLYSSTPETIALVSNQISQRYFNGSVDLEGFINCVPIVTTSTQP*SWP--RRDLRQVMLR 583
L+Y T+ +SNQ SQR++ + +G N P + +P + +VM R
Sbjct: 497 LIYDHACHTVVNLSNQGSQRHYPSFIHNKGKANYGPFIVEIMNYHQYPAMTSHMVKVMKR 556
Query: 584 YFCTSSLTTVTARSSK 631
F S + A++ +
Sbjct: 557 TFMISDIMATGAQNQQ 572
>Z66523-11|CAA91417.3| 696|Caenorhabditis elegans Hypothetical
protein T13H5.1a protein.
Length = 696
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = +2
Query: 410 LLYSSTPETIALVSNQISQRYFNGSVDLEGFINCVPIVTTSTQP*SWP--RRDLRQVMLR 583
L+Y T+ +SNQ SQR++ + +G N P + +P + +VM R
Sbjct: 440 LIYDHACHTVVNLSNQGSQRHYPSFIHNKGKANYGPFIVEIMNYHQYPAMTSHMVKVMKR 499
Query: 584 YFCTSSLTTVTARSSK 631
F S + A++ +
Sbjct: 500 TFMISDIMATGAQNQQ 515
>Z66523-10|CAH04723.1| 753|Caenorhabditis elegans Hypothetical
protein T13H5.1b protein.
Length = 753
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = +2
Query: 410 LLYSSTPETIALVSNQISQRYFNGSVDLEGFINCVPIVTTSTQP*SWP--RRDLRQVMLR 583
L+Y T+ +SNQ SQR++ + +G N P + +P + +VM R
Sbjct: 497 LIYDHACHTVVNLSNQGSQRHYPSFIHNKGKANYGPFIVEIMNYHQYPAMTSHMVKVMKR 556
Query: 584 YFCTSSLTTVTARSSK 631
F S + A++ +
Sbjct: 557 TFMISDIMATGAQNQQ 572
>AF067608-4|AAK95863.2| 473|Caenorhabditis elegans Hypothetical
protein B0511.13 protein.
Length = 473
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -1
Query: 245 YSGNSGMRCFHHWEKSGKADLINQYSVGFIQFFNRHGDEFLVYLIRISG 99
+ G++ C W K+G ++ +Y+V F R+GD + L+ I G
Sbjct: 259 FGGHTHKMCKKKWNKTGNSEYFYEYTVN--SFSWRNGDVPAMLLVVIDG 305
>Z74028-3|CAA98425.1| 1908|Caenorhabditis elegans Hypothetical
protein C14C10.5 protein.
Length = 1908
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = -2
Query: 700 IHFQHVCQVVPRVPAPLKCQMKRLA*TRCNRRKRTGTEIPEH 575
+H QH+ ++ ++ + ++KR + R RT T IPEH
Sbjct: 387 LHTQHIMVLLSKLLSNTILRLKRERSEKTQHRTRTLTPIPEH 428
>AL031635-1|CAA21039.2| 487|Caenorhabditis elegans Hypothetical
protein Y47D3B.1 protein.
Length = 487
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = -2
Query: 742 HRLLFCDELVP*RRIHFQHVCQVVPRVPAPLKCQMKRLA*TRCNRRKRTGTE 587
HR + VP R+ HF H+ VP+P M LA N++ +T E
Sbjct: 333 HRFGYVQTRVPCRQAHFYHLRHSHNTVPSPTPINMSPLA-DMLNKQWQTRVE 383
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,264,546
Number of Sequences: 27780
Number of extensions: 401906
Number of successful extensions: 1129
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1063
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1128
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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