Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0237
(472 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49938-4|CAA90189.3| 2180|Caenorhabditis elegans Hypothetical pr... 34 0.059
Z46811-1|CAA86842.3| 2180|Caenorhabditis elegans Hypothetical pr... 34 0.059
AF316539-1|AAK01632.1| 2200|Caenorhabditis elegans PTP-3A protein. 34 0.059
U88183-2|AAM69080.1| 1273|Caenorhabditis elegans Sensory axon gu... 33 0.14
U88183-1|AAB52657.2| 1269|Caenorhabditis elegans Sensory axon gu... 33 0.14
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 33 0.14
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 33 0.14
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 33 0.14
AF041053-1|AAC38848.1| 1273|Caenorhabditis elegans SAX-3 protein. 33 0.14
AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin for... 32 0.18
AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin for... 32 0.18
AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protei... 32 0.18
AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protei... 32 0.18
Z54218-4|CAA90958.1| 1367|Caenorhabditis elegans Hypothetical pr... 31 0.42
Z49910-9|CAA90125.1| 1367|Caenorhabditis elegans Hypothetical pr... 31 0.42
EF584655-1|ABQ57413.1| 1187|Caenorhabditis elegans LAD-2 long is... 29 1.3
AF456361-1|AAL60232.1| 1187|Caenorhabditis elegans immunoglobuli... 29 1.3
AC024817-49|AAF59572.3| 1187|Caenorhabditis elegans L1 cam adhes... 29 1.3
U80438-4|AAB37634.2| 1415|Caenorhabditis elegans Uncoordinated p... 29 1.7
U70618-1|AAB17088.1| 1415|Caenorhabditis elegans unc-40 protein. 29 1.7
U23448-4|AAS80348.1| 330|Caenorhabditis elegans Hypothetical pr... 27 9.0
>Z49938-4|CAA90189.3| 2180|Caenorhabditis elegans Hypothetical
protein C09D8.1a protein.
Length = 2180
Score = 33.9 bits (74), Expect = 0.059
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +2
Query: 98 SKYVNTTTGEGIPSPPLRVTVRQNIGSRVEVLWDRPEVPXGVIRYXKLY 244
S V T +GIP P +TV+ R+++ WD+P V+ Y Y
Sbjct: 525 STLVTVATRQGIPGQPPMLTVKALDSRRMQLTWDKPLYSSPVVGYTVRY 573
Score = 29.1 bits (62), Expect = 1.7
Identities = 17/69 (24%), Positives = 30/69 (43%)
Frame = +2
Query: 20 TNLKPFTNYNITFYIWDSRLNKTYASSKYVNTTTGEGIPSPPLRVTVRQNIGSRVEVLWD 199
++L P+++Y IT + S ++ S T E +PS P + V++ WD
Sbjct: 714 SDLLPYSSYEIT--VAASTMDGYGPESSIRVVKTLEDVPSAPRNFNAELTSATSVKLTWD 771
Query: 200 RPEVPXGVI 226
P G +
Sbjct: 772 APAAANGAL 780
>Z46811-1|CAA86842.3| 2180|Caenorhabditis elegans Hypothetical
protein C09D8.1a protein.
Length = 2180
Score = 33.9 bits (74), Expect = 0.059
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +2
Query: 98 SKYVNTTTGEGIPSPPLRVTVRQNIGSRVEVLWDRPEVPXGVIRYXKLY 244
S V T +GIP P +TV+ R+++ WD+P V+ Y Y
Sbjct: 525 STLVTVATRQGIPGQPPMLTVKALDSRRMQLTWDKPLYSSPVVGYTVRY 573
Score = 29.1 bits (62), Expect = 1.7
Identities = 17/69 (24%), Positives = 30/69 (43%)
Frame = +2
Query: 20 TNLKPFTNYNITFYIWDSRLNKTYASSKYVNTTTGEGIPSPPLRVTVRQNIGSRVEVLWD 199
++L P+++Y IT + S ++ S T E +PS P + V++ WD
Sbjct: 714 SDLLPYSSYEIT--VAASTMDGYGPESSIRVVKTLEDVPSAPRNFNAELTSATSVKLTWD 771
Query: 200 RPEVPXGVI 226
P G +
Sbjct: 772 APAAANGAL 780
>AF316539-1|AAK01632.1| 2200|Caenorhabditis elegans PTP-3A protein.
Length = 2200
Score = 33.9 bits (74), Expect = 0.059
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +2
Query: 98 SKYVNTTTGEGIPSPPLRVTVRQNIGSRVEVLWDRPEVPXGVIRYXKLY 244
S V T +GIP P +TV+ R+++ WD+P V+ Y Y
Sbjct: 525 STLVTVATRQGIPGQPPMLTVKALDSRRMQLTWDKPLYSSPVVGYTVRY 573
Score = 29.1 bits (62), Expect = 1.7
Identities = 17/69 (24%), Positives = 30/69 (43%)
Frame = +2
Query: 20 TNLKPFTNYNITFYIWDSRLNKTYASSKYVNTTTGEGIPSPPLRVTVRQNIGSRVEVLWD 199
++L P+++Y IT + S ++ S T E +PS P + V++ WD
Sbjct: 714 SDLLPYSSYEIT--VAASTMDGYGPESSIRVVKTLEDVPSAPRNFNAELTSATSVKLTWD 771
Query: 200 RPEVPXGVI 226
P G +
Sbjct: 772 APAAANGAL 780
>U88183-2|AAM69080.1| 1273|Caenorhabditis elegans Sensory axon
guidance protein 3,isoform b protein.
Length = 1273
Score = 32.7 bits (71), Expect = 0.14
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +2
Query: 20 TNLKPFTNYNITFYIWDSRLNKTY-ASSKYVNTTTGEGIPS-PPLRVTVRQNIGSRVEVL 193
+NL PFTNY + S ++ + A S ++ T E PS PP V +R + + +
Sbjct: 713 SNLMPFTNYEFFVIPYHSGVHSIHGAPSNSMDVLTAEAPPSLPPEDVRIRMLNLTTLRIS 772
Query: 194 WDRPE 208
W P+
Sbjct: 773 WKAPK 777
>U88183-1|AAB52657.2| 1269|Caenorhabditis elegans Sensory axon
guidance protein 3,isoform a protein.
Length = 1269
Score = 32.7 bits (71), Expect = 0.14
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +2
Query: 20 TNLKPFTNYNITFYIWDSRLNKTY-ASSKYVNTTTGEGIPS-PPLRVTVRQNIGSRVEVL 193
+NL PFTNY + S ++ + A S ++ T E PS PP V +R + + +
Sbjct: 713 SNLMPFTNYEFFVIPYHSGVHSIHGAPSNSMDVLTAEAPPSLPPEDVRIRMLNLTTLRIS 772
Query: 194 WDRPE 208
W P+
Sbjct: 773 WKAPK 777
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
protein K07E12.1b protein.
Length = 12268
Score = 32.7 bits (71), Expect = 0.14
Identities = 19/76 (25%), Positives = 34/76 (44%)
Frame = +2
Query: 26 LKPFTNYNITFYIWDSRLNKTYASSKYVNTTTGEGIPSPPLRVTVRQNIGSRVEVLWDRP 205
L+P T Y + + + K+ +T +G I +P V +I + V + W P
Sbjct: 997 LQPETPYFVKIAAVNPHGEGIHTDPKHFDTVSGAPIDAPT-DVLPSVSIDNTVNITWSPP 1055
Query: 206 EVPXGVIRYXKLYYSP 253
P G I+ +Y++P
Sbjct: 1056 TQPLGPIKSYTVYFAP 1071
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical
protein K07E12.1a protein.
Length = 13100
Score = 32.7 bits (71), Expect = 0.14
Identities = 19/76 (25%), Positives = 34/76 (44%)
Frame = +2
Query: 26 LKPFTNYNITFYIWDSRLNKTYASSKYVNTTTGEGIPSPPLRVTVRQNIGSRVEVLWDRP 205
L+P T Y + + + K+ +T +G I +P V +I + V + W P
Sbjct: 1060 LQPETPYFVKIAAVNPHGEGIHTDPKHFDTVSGAPIDAPT-DVLPSVSIDNTVNITWSPP 1118
Query: 206 EVPXGVIRYXKLYYSP 253
P G I+ +Y++P
Sbjct: 1119 TQPLGPIKSYTVYFAP 1134
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin
protein.
Length = 13100
Score = 32.7 bits (71), Expect = 0.14
Identities = 19/76 (25%), Positives = 34/76 (44%)
Frame = +2
Query: 26 LKPFTNYNITFYIWDSRLNKTYASSKYVNTTTGEGIPSPPLRVTVRQNIGSRVEVLWDRP 205
L+P T Y + + + K+ +T +G I +P V +I + V + W P
Sbjct: 1060 LQPETPYFVKIAAVNPHGEGIHTDPKHFDTVSGAPIDAPT-DVLPSVSIDNTVNITWSPP 1118
Query: 206 EVPXGVIRYXKLYYSP 253
P G I+ +Y++P
Sbjct: 1119 TQPLGPIKSYTVYFAP 1134
>AF041053-1|AAC38848.1| 1273|Caenorhabditis elegans SAX-3 protein.
Length = 1273
Score = 32.7 bits (71), Expect = 0.14
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +2
Query: 20 TNLKPFTNYNITFYIWDSRLNKTY-ASSKYVNTTTGEGIPS-PPLRVTVRQNIGSRVEVL 193
+NL PFTNY + S ++ + A S ++ T E PS PP V +R + + +
Sbjct: 713 SNLMPFTNYEFFVIPYHSGVHSIHGAPSNSMDVLTAEAPPSLPPEDVRIRMLNLTTLRIS 772
Query: 194 WDRPE 208
W P+
Sbjct: 773 WKAPK 777
>AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin form A
protein.
Length = 4280
Score = 32.3 bits (70), Expect = 0.18
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +2
Query: 98 SKYVNTTTGEGIPSPPLRVTVRQNIGSRVEVLWDRPEVPXGVIRYXKLYY 247
SK ++ TT EG P P +T + + + W P P GVI L Y
Sbjct: 2510 SKELSITTSEGAPGPVEGLTAKPTGPTSIVARWKPPRDPNGVITGYTLTY 2559
Score = 31.5 bits (68), Expect = 0.32
Identities = 18/77 (23%), Positives = 32/77 (41%)
Frame = +2
Query: 23 NLKPFTNYNITFYIWDSRLNKTYASSKYVNTTTGEGIPSPPLRVTVRQNIGSRVEVLWDR 202
NL+P T YN+ + +R +++ T+ G+ P V V +++W
Sbjct: 1463 NLQPQTRYNVKVRAYTARGAGPWSTEVPFQTSAGQQNVQAPGFVKVLHTGADNAQLVWQS 1522
Query: 203 PEVPXGVIRYXKLYYSP 253
P G + K Y+P
Sbjct: 1523 PYPNPGYVDKYKCRYAP 1539
Score = 30.7 bits (66), Expect = 0.55
Identities = 20/76 (26%), Positives = 32/76 (42%)
Frame = +2
Query: 26 LKPFTNYNITFYIWDSRLNKTYASSKYVNTTTGEGIPSPPLRVTVRQNIGSRVEVLWDRP 205
L P+T Y I + + + S++V TT P P + +E+ W P
Sbjct: 2686 LIPYTQYQIRVRAINKEGDGPF--SEWVPFTTSATNPPAPSDLQEEATFPHAIEISWLPP 2743
Query: 206 EVPXGVIRYXKLYYSP 253
P G I + K+ Y+P
Sbjct: 2744 TPPHGNIDFYKVRYTP 2759
Score = 28.7 bits (61), Expect = 2.2
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = +2
Query: 98 SKYVNTTTGEGIPS-PPLRVTVRQNIGSRVEVLWDRPE 208
S V TT E P+ PP V SR ++ W +PE
Sbjct: 2610 SSVVTVTTEEAAPTGPPQNVRAGSVTSSRADITWTQPE 2647
Score = 28.7 bits (61), Expect = 2.2
Identities = 17/76 (22%), Positives = 34/76 (44%)
Frame = +2
Query: 26 LKPFTNYNITFYIWDSRLNKTYASSKYVNTTTGEGIPSPPLRVTVRQNIGSRVEVLWDRP 205
L+P + Y I + + ++ S + TT E PP +T Q +++++ W P
Sbjct: 3208 LQPGSLYRIKVRAYTAEGPGPWSDSLEIRTTGSE--LGPPRELTAVQTKATQIQLTWLPP 3265
Query: 206 EVPXGVIRYXKLYYSP 253
++ ++ YSP
Sbjct: 3266 YPEKAIVTAYRIRYSP 3281
>AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin form B
protein.
Length = 4450
Score = 32.3 bits (70), Expect = 0.18
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +2
Query: 98 SKYVNTTTGEGIPSPPLRVTVRQNIGSRVEVLWDRPEVPXGVIRYXKLYY 247
SK ++ TT EG P P +T + + + W P P GVI L Y
Sbjct: 2510 SKELSITTSEGAPGPVEGLTAKPTGPTSIVARWKPPRDPNGVITGYTLTY 2559
Score = 31.5 bits (68), Expect = 0.32
Identities = 18/77 (23%), Positives = 32/77 (41%)
Frame = +2
Query: 23 NLKPFTNYNITFYIWDSRLNKTYASSKYVNTTTGEGIPSPPLRVTVRQNIGSRVEVLWDR 202
NL+P T YN+ + +R +++ T+ G+ P V V +++W
Sbjct: 1463 NLQPQTRYNVKVRAYTARGAGPWSTEVPFQTSAGQQNVQAPGFVKVLHTGADNAQLVWQS 1522
Query: 203 PEVPXGVIRYXKLYYSP 253
P G + K Y+P
Sbjct: 1523 PYPNPGYVDKYKCRYAP 1539
Score = 30.7 bits (66), Expect = 0.55
Identities = 20/76 (26%), Positives = 32/76 (42%)
Frame = +2
Query: 26 LKPFTNYNITFYIWDSRLNKTYASSKYVNTTTGEGIPSPPLRVTVRQNIGSRVEVLWDRP 205
L P+T Y I + + + S++V TT P P + +E+ W P
Sbjct: 2686 LIPYTQYQIRVRAINKEGDGPF--SEWVPFTTSATNPPAPSDLQEEATFPHAIEISWLPP 2743
Query: 206 EVPXGVIRYXKLYYSP 253
P G I + K+ Y+P
Sbjct: 2744 TPPHGNIDFYKVRYTP 2759
Score = 28.7 bits (61), Expect = 2.2
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = +2
Query: 98 SKYVNTTTGEGIPS-PPLRVTVRQNIGSRVEVLWDRPE 208
S V TT E P+ PP V SR ++ W +PE
Sbjct: 2610 SSVVTVTTEEAAPTGPPQNVRAGSVTSSRADITWTQPE 2647
Score = 28.7 bits (61), Expect = 2.2
Identities = 17/76 (22%), Positives = 34/76 (44%)
Frame = +2
Query: 26 LKPFTNYNITFYIWDSRLNKTYASSKYVNTTTGEGIPSPPLRVTVRQNIGSRVEVLWDRP 205
L+P + Y I + + ++ S + TT E PP +T Q +++++ W P
Sbjct: 3208 LQPGSLYRIKVRAYTAEGPGPWSDSLEIRTTGSE--LGPPRELTAVQTKATQIQLTWLPP 3265
Query: 206 EVPXGVIRYXKLYYSP 253
++ ++ YSP
Sbjct: 3266 YPEKAIVTAYRIRYSP 3281
>AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protein
805, isoform b protein.
Length = 4450
Score = 32.3 bits (70), Expect = 0.18
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +2
Query: 98 SKYVNTTTGEGIPSPPLRVTVRQNIGSRVEVLWDRPEVPXGVIRYXKLYY 247
SK ++ TT EG P P +T + + + W P P GVI L Y
Sbjct: 2510 SKELSITTSEGAPGPVEGLTAKPTGPTSIVARWKPPRDPNGVITGYTLTY 2559
Score = 31.5 bits (68), Expect = 0.32
Identities = 18/77 (23%), Positives = 32/77 (41%)
Frame = +2
Query: 23 NLKPFTNYNITFYIWDSRLNKTYASSKYVNTTTGEGIPSPPLRVTVRQNIGSRVEVLWDR 202
NL+P T YN+ + +R +++ T+ G+ P V V +++W
Sbjct: 1463 NLQPQTRYNVKVRAYTARGAGPWSTEVPFQTSAGQQNVQAPGFVKVLHTGADNAQLVWQS 1522
Query: 203 PEVPXGVIRYXKLYYSP 253
P G + K Y+P
Sbjct: 1523 PYPNPGYVDKYKCRYAP 1539
Score = 30.7 bits (66), Expect = 0.55
Identities = 20/76 (26%), Positives = 32/76 (42%)
Frame = +2
Query: 26 LKPFTNYNITFYIWDSRLNKTYASSKYVNTTTGEGIPSPPLRVTVRQNIGSRVEVLWDRP 205
L P+T Y I + + + S++V TT P P + +E+ W P
Sbjct: 2686 LIPYTQYQIRVRAINKEGDGPF--SEWVPFTTSATNPPAPSDLQEEATFPHAIEISWLPP 2743
Query: 206 EVPXGVIRYXKLYYSP 253
P G I + K+ Y+P
Sbjct: 2744 TPPHGNIDFYKVRYTP 2759
Score = 28.7 bits (61), Expect = 2.2
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = +2
Query: 98 SKYVNTTTGEGIPS-PPLRVTVRQNIGSRVEVLWDRPE 208
S V TT E P+ PP V SR ++ W +PE
Sbjct: 2610 SSVVTVTTEEAAPTGPPQNVRAGSVTSSRADITWTQPE 2647
Score = 28.7 bits (61), Expect = 2.2
Identities = 17/76 (22%), Positives = 34/76 (44%)
Frame = +2
Query: 26 LKPFTNYNITFYIWDSRLNKTYASSKYVNTTTGEGIPSPPLRVTVRQNIGSRVEVLWDRP 205
L+P + Y I + + ++ S + TT E PP +T Q +++++ W P
Sbjct: 3208 LQPGSLYRIKVRAYTAEGPGPWSDSLEIRTTGSE--LGPPRELTAVQTKATQIQLTWLPP 3265
Query: 206 EVPXGVIRYXKLYYSP 253
++ ++ YSP
Sbjct: 3266 YPEKAIVTAYRIRYSP 3281
>AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protein
805, isoform a protein.
Length = 4280
Score = 32.3 bits (70), Expect = 0.18
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +2
Query: 98 SKYVNTTTGEGIPSPPLRVTVRQNIGSRVEVLWDRPEVPXGVIRYXKLYY 247
SK ++ TT EG P P +T + + + W P P GVI L Y
Sbjct: 2510 SKELSITTSEGAPGPVEGLTAKPTGPTSIVARWKPPRDPNGVITGYTLTY 2559
Score = 31.5 bits (68), Expect = 0.32
Identities = 18/77 (23%), Positives = 32/77 (41%)
Frame = +2
Query: 23 NLKPFTNYNITFYIWDSRLNKTYASSKYVNTTTGEGIPSPPLRVTVRQNIGSRVEVLWDR 202
NL+P T YN+ + +R +++ T+ G+ P V V +++W
Sbjct: 1463 NLQPQTRYNVKVRAYTARGAGPWSTEVPFQTSAGQQNVQAPGFVKVLHTGADNAQLVWQS 1522
Query: 203 PEVPXGVIRYXKLYYSP 253
P G + K Y+P
Sbjct: 1523 PYPNPGYVDKYKCRYAP 1539
Score = 30.7 bits (66), Expect = 0.55
Identities = 20/76 (26%), Positives = 32/76 (42%)
Frame = +2
Query: 26 LKPFTNYNITFYIWDSRLNKTYASSKYVNTTTGEGIPSPPLRVTVRQNIGSRVEVLWDRP 205
L P+T Y I + + + S++V TT P P + +E+ W P
Sbjct: 2686 LIPYTQYQIRVRAINKEGDGPF--SEWVPFTTSATNPPAPSDLQEEATFPHAIEISWLPP 2743
Query: 206 EVPXGVIRYXKLYYSP 253
P G I + K+ Y+P
Sbjct: 2744 TPPHGNIDFYKVRYTP 2759
Score = 28.7 bits (61), Expect = 2.2
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = +2
Query: 98 SKYVNTTTGEGIPS-PPLRVTVRQNIGSRVEVLWDRPE 208
S V TT E P+ PP V SR ++ W +PE
Sbjct: 2610 SSVVTVTTEEAAPTGPPQNVRAGSVTSSRADITWTQPE 2647
Score = 28.7 bits (61), Expect = 2.2
Identities = 17/76 (22%), Positives = 34/76 (44%)
Frame = +2
Query: 26 LKPFTNYNITFYIWDSRLNKTYASSKYVNTTTGEGIPSPPLRVTVRQNIGSRVEVLWDRP 205
L+P + Y I + + ++ S + TT E PP +T Q +++++ W P
Sbjct: 3208 LQPGSLYRIKVRAYTAEGPGPWSDSLEIRTTGSE--LGPPRELTAVQTKATQIQLTWLPP 3265
Query: 206 EVPXGVIRYXKLYYSP 253
++ ++ YSP
Sbjct: 3266 YPEKAIVTAYRIRYSP 3281
>Z54218-4|CAA90958.1| 1367|Caenorhabditis elegans Hypothetical
protein F44G4.8 protein.
Length = 1367
Score = 31.1 bits (67), Expect = 0.42
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +2
Query: 92 ASSKYVNTTTGEGIPSPPLRVTVRQNIGSRVEVLWDRPE 208
+S +++T T + PSP V + QN GS VEV W E
Sbjct: 218 SSRPWISTLTTK--PSPLKEVNINQNAGSCVEVSWQNDE 254
>Z49910-9|CAA90125.1| 1367|Caenorhabditis elegans Hypothetical
protein F44G4.8 protein.
Length = 1367
Score = 31.1 bits (67), Expect = 0.42
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +2
Query: 92 ASSKYVNTTTGEGIPSPPLRVTVRQNIGSRVEVLWDRPE 208
+S +++T T + PSP V + QN GS VEV W E
Sbjct: 218 SSRPWISTLTTK--PSPLKEVNINQNAGSCVEVSWQNDE 254
>EF584655-1|ABQ57413.1| 1187|Caenorhabditis elegans LAD-2 long isoform
protein.
Length = 1187
Score = 29.5 bits (63), Expect = 1.3
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
Frame = +2
Query: 38 TNYNITFYIWDSRLNKTYASSKYVNTTTGEGIPSPPLRVTVRQNIGSRVEVL-WDRPEVP 214
TNY+ + RL A S YV+ EG P + V ++GS +L WD P P
Sbjct: 891 TNYSAHIRTRNKRLRS--APSDYVSFAMPEGPPGKVHNLRV-YSVGSTAILLQWDAPLQP 947
Query: 215 XGVIRYXKLYYSPPXRPSXXSFXPXTRKH 301
G IR + + + ++ +KH
Sbjct: 948 NGRIRGYFISFQNEKNETEETYVIHRQKH 976
>AF456361-1|AAL60232.1| 1187|Caenorhabditis elegans immunoglobulin
domain-containingprotein Y54G2A.25 protein.
Length = 1187
Score = 29.5 bits (63), Expect = 1.3
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
Frame = +2
Query: 38 TNYNITFYIWDSRLNKTYASSKYVNTTTGEGIPSPPLRVTVRQNIGSRVEVL-WDRPEVP 214
TNY+ + RL A S YV+ EG P + V ++GS +L WD P P
Sbjct: 891 TNYSAHIRTRNKRLRS--APSDYVSFAMPEGPPGKVHNLRV-YSVGSTAILLQWDAPLQP 947
Query: 215 XGVIRYXKLYYSPPXRPSXXSFXPXTRKH 301
G IR + + + ++ +KH
Sbjct: 948 NGRIRGYFISFQNEKNETEETYVIHRQKH 976
>AC024817-49|AAF59572.3| 1187|Caenorhabditis elegans L1 cam adhesion
molecule homologprotein 2, isoform a protein.
Length = 1187
Score = 29.5 bits (63), Expect = 1.3
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
Frame = +2
Query: 38 TNYNITFYIWDSRLNKTYASSKYVNTTTGEGIPSPPLRVTVRQNIGSRVEVL-WDRPEVP 214
TNY+ + RL A S YV+ EG P + V ++GS +L WD P P
Sbjct: 891 TNYSAHIRTRNKRLRS--APSDYVSFAMPEGPPGKVHNLRV-YSVGSTAILLQWDAPLQP 947
Query: 215 XGVIRYXKLYYSPPXRPSXXSFXPXTRKH 301
G IR + + + ++ +KH
Sbjct: 948 NGRIRGYFISFQNEKNETEETYVIHRQKH 976
>U80438-4|AAB37634.2| 1415|Caenorhabditis elegans Uncoordinated
protein 40 protein.
Length = 1415
Score = 29.1 bits (62), Expect = 1.7
Identities = 18/77 (23%), Positives = 32/77 (41%)
Frame = +2
Query: 20 TNLKPFTNYNITFYIWDSRLNKTYASSKYVNTTTGEGIPSPPLRVTVRQNIGSRVEVLWD 199
T+L+P T Y I + ++ S V T + +P +T +++ W
Sbjct: 498 TSLQPSTMYLIRVTAENEAGMGKFSDSLKVTTNKEQAVPGKVASLTTTATGPETIDIRWS 557
Query: 200 RPEVPXGVIRYXKLYYS 250
P +RY K++YS
Sbjct: 558 PPSGGQPALRY-KIFYS 573
Score = 28.3 bits (60), Expect = 2.9
Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = +2
Query: 35 FTNYNITFYIWDSRLNKTYASSKYVNTTTGEGIPS-PPLRVTVRQNIGSRVEVLWDRPE 208
+T Y I S N + SS V T PS PP+ + + + V V WD PE
Sbjct: 601 YTGYQIRIEAEGS--NGSGLSSDTVKVRTQSDEPSAPPVNIQAEADSSTSVRVSWDEPE 657
>U70618-1|AAB17088.1| 1415|Caenorhabditis elegans unc-40 protein.
Length = 1415
Score = 29.1 bits (62), Expect = 1.7
Identities = 18/77 (23%), Positives = 32/77 (41%)
Frame = +2
Query: 20 TNLKPFTNYNITFYIWDSRLNKTYASSKYVNTTTGEGIPSPPLRVTVRQNIGSRVEVLWD 199
T+L+P T Y I + ++ S V T + +P +T +++ W
Sbjct: 498 TSLQPSTMYLIRVTAENEAGMGKFSDSLKVTTNKEQAVPGKVASLTTTATGPETIDIRWS 557
Query: 200 RPEVPXGVIRYXKLYYS 250
P +RY K++YS
Sbjct: 558 PPSGGQPALRY-KIFYS 573
Score = 28.3 bits (60), Expect = 2.9
Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = +2
Query: 35 FTNYNITFYIWDSRLNKTYASSKYVNTTTGEGIPS-PPLRVTVRQNIGSRVEVLWDRPE 208
+T Y I S N + SS V T PS PP+ + + + V V WD PE
Sbjct: 601 YTGYQIRIEAEGS--NGSGLSSDTVKVRTQSDEPSAPPVNIQAEADSSTSVRVSWDEPE 657
>U23448-4|AAS80348.1| 330|Caenorhabditis elegans Hypothetical
protein C04A2.1 protein.
Length = 330
Score = 26.6 bits (56), Expect = 9.0
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 125 EGIPSPPLRVTVRQNIGSRVEVLWDRPEVPXGVIRYXKL 241
+GIP + ++ SR + +W R EVP VI+ KL
Sbjct: 77 KGIPHTFRKELWLRSCPSRADGVWQRHEVPDEVIKQIKL 115
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,937,536
Number of Sequences: 27780
Number of extensions: 144922
Number of successful extensions: 456
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 385
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 456
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 850313440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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