Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0236
         (636 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    22   4.9  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   6.5  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   6.5  

>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +3

Query: 363 EPTPPDLFVPNQSXEAHNF 419
           E   PD F+P    + HNF
Sbjct: 104 EKFDPDRFLPENCLKRHNF 122


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = +1

Query: 439 RPCALRXMRTVRPATVSKVFNNF 507
           RPC +     V    VSK+ N +
Sbjct: 72  RPCVISRQLRVSHGCVSKILNRY 94


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 132 YPISVWIDEILHFNLHAN 79
           + I +WI   L+F LH N
Sbjct: 140 FVILLWISFFLNFMLHCN 157


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,270
Number of Sequences: 336
Number of extensions: 2310
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)