Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0236
         (636 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z71266-10|CAA95838.3|  491|Caenorhabditis elegans Hypothetical p...    33   0.17 
AC024775-2|AAK68456.1|  452|Caenorhabditis elegans Hypothetical ...    29   3.7  
U97193-6|AAV34803.1|  780|Caenorhabditis elegans Hypothetical pr...    28   6.4  
U97193-5|AAV34804.1|  783|Caenorhabditis elegans Hypothetical pr...    28   6.4  

>Z71266-10|CAA95838.3|  491|Caenorhabditis elegans Hypothetical
           protein R06C7.7 protein.
          Length = 491

 Score = 33.1 bits (72), Expect = 0.17
 Identities = 15/49 (30%), Positives = 28/49 (57%)
 Frame = +1

Query: 64  IDRIKVGMKVEVQNLIDPYRYWIATVCEXVGXRLLVRYDGCDEDLQQLW 210
           +D+ KVG+++E  ++ +      ATV    G  + V +DG DE+  +L+
Sbjct: 415 LDKFKVGLRLEAADMCENQFICPATVKSVHGRLINVNFDGWDEEFDELY 463


>AC024775-2|AAK68456.1|  452|Caenorhabditis elegans Hypothetical
           protein Y41D4A.6 protein.
          Length = 452

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
 Frame = +1

Query: 13  EGQSVSIEALNNKGLSPIDRIKVGMKVEVQN---LIDPYRYW 129
           +  S S+E     G+S ++ +K+G+ VE  N     D +R+W
Sbjct: 210 KNDSTSVELPEKAGISSLEGLKIGIPVEYHNECLTEDAWRHW 251


>U97193-6|AAV34803.1|  780|Caenorhabditis elegans Hypothetical
           protein C06A5.3a protein.
          Length = 780

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 18/46 (39%), Positives = 22/46 (47%)
 Frame = -1

Query: 510 KEVVEHLGDGGRSHRPHXPEGTGPXTSYLLRSYAPXSSDLARRDQA 373
           K+ V+ L    RSH P         T  L RS +P SS L  RD+A
Sbjct: 434 KKRVQVLSPRSRSHSPIPQITPSTSTGLLGRSNSPLSSSLRIRDRA 479


>U97193-5|AAV34804.1|  783|Caenorhabditis elegans Hypothetical
           protein C06A5.3b protein.
          Length = 783

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 18/46 (39%), Positives = 22/46 (47%)
 Frame = -1

Query: 510 KEVVEHLGDGGRSHRPHXPEGTGPXTSYLLRSYAPXSSDLARRDQA 373
           K+ V+ L    RSH P         T  L RS +P SS L  RD+A
Sbjct: 434 KKRVQVLSPRSRSHSPIPQITPSTSTGLLGRSNSPLSSSLRIRDRA 479


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,583,171
Number of Sequences: 27780
Number of extensions: 225232
Number of successful extensions: 506
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 506
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)