Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0232
(767 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 218 4e-57
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 117 1e-26
AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin con... 98 7e-21
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 52 5e-07
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 50 1e-06
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 49 3e-06
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 49 3e-06
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 47 1e-05
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 40 0.003
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 40 0.003
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 39 0.005
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 38 0.006
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 38 0.006
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 38 0.008
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 38 0.010
AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical... 35 0.055
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 31 0.68
U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2 (c... 29 4.8
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 218 bits (532), Expect = 4e-57
Identities = 95/151 (62%), Positives = 115/151 (76%)
Frame = +3
Query: 33 EKYNTKCPGVKRLMREAIELAEATEEYCARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRI 212
E+YNTK GV+RLM+EA+EL + TE Y A+P+EDNLFEWHFT++G GT+FEGGIYHGRI
Sbjct: 3 EQYNTKNAGVRRLMKEAMELRQPTEMYHAQPMEDNLFEWHFTIRGTLGTDFEGGIYHGRI 62
Query: 213 LLPKEYXXXXXXXXXXXXNGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFMPTP 392
+ P +Y NGRFE+NKK+CLSISG+HPETW PSWSIRTALLALI F+P+
Sbjct: 63 IFPADYPMKPPNLILLTPNGRFELNKKVCLSISGYHPETWLPSWSIRTALLALIGFLPST 122
Query: 393 AEGRIGSLDYTPAERKILAKKSTNWSCSQCG 485
G +GSLDY P ER+ LAK S W C +CG
Sbjct: 123 PGGALGSLDYPPKERQRLAKLSCEWKCKECG 153
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 117 bits (281), Expect = 1e-26
Identities = 50/118 (42%), Positives = 75/118 (63%)
Frame = +3
Query: 117 ARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYXXXXXXXXXXXXNGRFEINKKI 296
A PLE N+ EW + + G T +EGGIY G++L PK++ NGRF+ N ++
Sbjct: 30 AAPLETNILEWRYIIIGAPKTPYEGGIYMGKLLFPKDFPFKPPAILMLTPNGRFQTNTRL 89
Query: 297 CLSISGHHPETWQPSWSIRTALLALIAFMPTPAEGRIGSLDYTPAERKILAKKSTNWS 470
CLSIS +HP+TW P+W++ T + L++FM + +GSL + +ERK+LAKKS W+
Sbjct: 90 CLSISDYHPDTWNPAWTVSTIITGLMSFM-NDNQPTLGSLVTSESERKLLAKKSKQWN 146
>AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein15 protein.
Length = 218
Score = 97.9 bits (233), Expect = 7e-21
Identities = 45/138 (32%), Positives = 77/138 (55%), Gaps = 1/138 (0%)
Frame = +3
Query: 60 VKRLMREAIELAE-ATEEYCARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYXX 236
V+RL ++ +L + + A P EDN+ EWH+ ++G T F GG Y G+++ + +
Sbjct: 21 VRRLQKDYAKLMQDPVDGIKALPNEDNILEWHYCLRGSPDTPFYGGYYWGKVIFKENFPW 80
Query: 237 XXXXXXXXXXNGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFMPTPAEGRIGSL 416
NGRF+ N ++CLSIS +HPE+W P W++ L+ L +FM + GS+
Sbjct: 81 SPPAITMITPNGRFQTNTRLCLSISDYHPESWNPGWTVSAILIGLHSFMNENSPA-AGSI 139
Query: 417 DYTPAERKILAKKSTNWS 470
TP ++++ A S ++
Sbjct: 140 AGTPQDQRMYAAASKEFN 157
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 52.0 bits (119), Expect = 5e-07
Identities = 38/125 (30%), Positives = 56/125 (44%), Gaps = 14/125 (11%)
Frame = +3
Query: 60 VKRLMREAIELAEATEE-YCARPL-EDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEY- 230
+KRLM E EL E A P+ EDN FEW + GP+ T F G++ RI P++Y
Sbjct: 6 LKRLMTEYKELTTRPPEGIIAAPIDEDNFFEWECLITGPEETCFANGVFPARITFPQDYP 65
Query: 231 -XXXXXXXXXXXXNGRFEINKKICLSI---SGHHP-------ETWQPSWSIRTALLALIA 377
+ + ++C+SI G P E W P SI LL++++
Sbjct: 66 LSPPKMRFTCGIFHPNIYADGRVCISILHAPGDDPTGYELSNERWSPVQSIEKILLSVVS 125
Query: 378 FMPTP 392
+ P
Sbjct: 126 MLAEP 130
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 50.4 bits (115), Expect = 1e-06
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 3/113 (2%)
Frame = +3
Query: 63 KRLMREAIEL-AEATEEYCARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYXXX 239
+R+++E L A+ A P E N +H + GP + F GG++ + LP+EY
Sbjct: 7 RRIIKETQRLLADPVPGISANPDESNARYFHVMIAGPDDSPFAGGVFKLELFLPEEYPMA 66
Query: 240 XXXXXXXXXNGRFEINK--KICLSISGHHPETWQPSWSIRTALLALIAFMPTP 392
I+K +ICL I + W P+ IRT LL++ A + P
Sbjct: 67 APKVRFMTKIYHPNIDKLGRICLDIL---KDKWSPALQIRTVLLSIQALLSAP 116
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 49.2 bits (112), Expect = 3e-06
Identities = 30/114 (26%), Positives = 50/114 (43%), Gaps = 3/114 (2%)
Frame = +3
Query: 60 VKRLMREAIELAEATEEYC-ARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEY-- 230
+KR+ +E +L C A P+ D+LF W T+ GP + ++GG++ I P +Y
Sbjct: 3 LKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPF 62
Query: 231 XXXXXXXXXXXXNGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFMPTP 392
+ N ICL I W P+ +I LL++ + + P
Sbjct: 63 KPPKVAFTTRIYHPNINSNGSICLDIL---RSQWSPALTISKVLLSICSLLCDP 113
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 49.2 bits (112), Expect = 3e-06
Identities = 30/114 (26%), Positives = 50/114 (43%), Gaps = 3/114 (2%)
Frame = +3
Query: 60 VKRLMREAIELAEATEEYC-ARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEY-- 230
+KR+ +E +L C A P+ D+LF W T+ GP + ++GG++ I P +Y
Sbjct: 3 LKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPF 62
Query: 231 XXXXXXXXXXXXNGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFMPTP 392
+ N ICL I W P+ +I LL++ + + P
Sbjct: 63 KPPKVAFTTRIYHPNINSNGSICLDIL---RSQWSPALTISKVLLSICSLLCDP 113
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 47.2 bits (107), Expect = 1e-05
Identities = 39/149 (26%), Positives = 61/149 (40%), Gaps = 14/149 (9%)
Frame = +3
Query: 36 KYNTKCPGVKRLMREAIEL-AEATEEYCARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRI 212
K +T ++ L E L ++ E + EDNLF W + GP T ++GG + I
Sbjct: 4 KASTSSGALRALTMELKNLQSQPVEGFTIDVNEDNLFVWTVGIYGPPKTLYQGGYFKASI 63
Query: 213 LLPKEYXXXXXXXXXXXXNGRFEI--NKKICLSISGHHP-----------ETWQPSWSIR 353
P Y + N +C+SI H P E W P+ S+R
Sbjct: 64 RFPSNYPYSPPSMKFTTKVWHPNVYENGDLCISIL-HSPIDDPQSGELACERWNPTQSVR 122
Query: 354 TALLALIAFMPTPAEGRIGSLDYTPAERK 440
T LL++I+ + P ++D + RK
Sbjct: 123 TILLSVISLLNEPNTSSPANVDASVMYRK 151
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 39.5 bits (88), Expect = 0.003
Identities = 28/116 (24%), Positives = 47/116 (40%), Gaps = 3/116 (2%)
Frame = +3
Query: 54 PGVKRLMREAIELAEATEE-YCARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEY 230
P +RLMR+ +L E P EDN+ W + GP+ T FE G + + +EY
Sbjct: 4 PSRRRLMRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEY 63
Query: 231 --XXXXXXXXXXXXNGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFMPTP 392
+ + ICL I + W P++ + L ++ + + P
Sbjct: 64 PNKPPTVKFISKMFHPNVYADGSICLDILQNR---WSPTYDVAAILTSIQSLLDEP 116
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 39.5 bits (88), Expect = 0.003
Identities = 28/116 (24%), Positives = 47/116 (40%), Gaps = 3/116 (2%)
Frame = +3
Query: 54 PGVKRLMREAIELAEATEE-YCARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEY 230
P +RLMR+ +L E P EDN+ W + GP+ T FE G + + +EY
Sbjct: 4 PSRRRLMRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEY 63
Query: 231 --XXXXXXXXXXXXNGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFMPTP 392
+ + ICL I + W P++ + L ++ + + P
Sbjct: 64 PNKPPTVKFISKMFHPNVYADGSICLDILQNR---WSPTYDVAAILTSIQSLLDEP 116
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 38.7 bits (86), Expect = 0.005
Identities = 31/128 (24%), Positives = 57/128 (44%), Gaps = 14/128 (10%)
Frame = +3
Query: 111 YCARPLEDN-LFEWHFTVQGPKGTEFEGGIYHGRILLPKEYXXXXXXXXXXXXNGRFEIN 287
+ A ++DN +++W V GP T +EGG + + P++Y I+
Sbjct: 23 FSAGLVDDNDIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYPQKPPKMKFISEIWHPNID 82
Query: 288 KK--ICLSISGHHP-----------ETWQPSWSIRTALLALIAFMPTPAEGRIGSLDYTP 428
K+ +C+SI H P E W P ++ T LL++I+ + P ++D
Sbjct: 83 KEGNVCISIL-HDPGDDKWGYERPEERWLPVHTVETILLSVISMLTDPNFESPANVDAAK 141
Query: 429 AERKILAK 452
+R+ A+
Sbjct: 142 MQRENYAE 149
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 38.3 bits (85), Expect = 0.006
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +3
Query: 135 NLFEWHFTVQGPKGTEFEGGIYHGRILLPKEY--XXXXXXXXXXXXNGRFEINKKICLSI 308
NLF W + G K T +EGG+Y R+L ++ + + +CLS+
Sbjct: 37 NLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSL 96
Query: 309 SGHHPETWQPSWSIRTALLAL 371
+ + W+PS SI+ L+ +
Sbjct: 97 LDENKD-WKPSISIKQLLIGI 116
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 38.3 bits (85), Expect = 0.006
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +3
Query: 135 NLFEWHFTVQGPKGTEFEGGIYHGRILLPKEY--XXXXXXXXXXXXNGRFEINKKICLSI 308
NLF W + G K T +EGG+Y R+L ++ + + +CLS+
Sbjct: 37 NLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSL 96
Query: 309 SGHHPETWQPSWSIRTALLAL 371
+ + W+PS SI+ L+ +
Sbjct: 97 LDENKD-WKPSISIKQLLIGI 116
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 37.9 bits (84), Expect = 0.008
Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 4/115 (3%)
Frame = +3
Query: 60 VKRLMREAIELAEATEE-YCARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYXX 236
++R +E + +E +E L +NL E ++GP T + GG++ I +P +Y
Sbjct: 9 LQRECKEVVTNSEISETGIMIEILNENLTEIKGHIRGPPDTPYAGGMFDLDIKIPDQYPF 68
Query: 237 XXXXXXXXXXNGRFEINKK---ICLSISGHHPETWQPSWSIRTALLALIAFMPTP 392
++ + ICL I + W S ++RT LL++ A M TP
Sbjct: 69 SPPNVKFSTKIWHPNVSSQTGVICLDIL---KDQWAASLTLRTVLLSIQALMCTP 120
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 37.5 bits (83), Expect = 0.010
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +3
Query: 6 KLNKMAEIVEKYNTKCPGVKRLMREAIELAEATEEYCARPL-EDNLFEWHFTVQGPKGTE 182
KLNKM + N V R +E ++ TE + E+NL + ++GP+GT
Sbjct: 5 KLNKMQFSDKMSNLALARVTRKCKEVANASDITEAGIHVEIKENNLMDIKGFIKGPEGTP 64
Query: 183 FEGGIYHGRILLPKEY 230
+ GG + ++ +P+ Y
Sbjct: 65 YAGGTFEIKVDIPEHY 80
>AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical
protein F52C6.12 protein.
Length = 78
Score = 35.1 bits (77), Expect = 0.055
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +3
Query: 60 VKRLMREAIELAEATEEYCAR-PLEDNLFEWHFTVQGPKGTEFEGGIY 200
+KR+ +E +L C+ + D+L+ W T+ GP + ++GGI+
Sbjct: 3 LKRIQKELHDLGRDPPAQCSTGSVGDDLYHWQATIMGPPESPYQGGIF 50
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 31.5 bits (68), Expect = 0.68
Identities = 27/119 (22%), Positives = 52/119 (43%), Gaps = 7/119 (5%)
Frame = +3
Query: 63 KRLMREAIEL-AEATEEYCA--RPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEY- 230
+RLM+E +L +EA E ++L +W V G +GT + G ++ + +Y
Sbjct: 7 RRLMKELAQLKSEAPEGLLVDNTSTSNDLKQWKIGVVGAEGTLYAGEVFMLQFTFGPQYP 66
Query: 231 ---XXXXXXXXXXXXNGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFMPTPAE 398
+ N ICLSI + W P+ S+++ L++++ + + E
Sbjct: 67 FNSPEVMFVGETIPAHPHIYSNGHICLSILS---DDWTPALSVQSVCLSILSMLSSSKE 122
>U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2
(conjugating enzyme)variant protein 2 protein.
Length = 230
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
Frame = +3
Query: 60 VKRLMREAIELAEATEE-YCARPLE----DNLFEWHFTVQGPKGTEFEGGIY 200
+ + E + E T + Y A+P+ D W TV GP+G+ +EGG Y
Sbjct: 37 INTVKEEKAKWDERTPQGYTAKPISFEGADIWCSWICTVPGPRGSPWEGGEY 88
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,354,182
Number of Sequences: 27780
Number of extensions: 285898
Number of successful extensions: 617
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 610
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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