Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0232
(767 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative ... 178 4e-45
At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative ... 113 9e-26
At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative ... 113 9e-26
At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative ... 52 4e-07
At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10) id... 51 7e-07
At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative ... 50 1e-06
At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa ... 50 2e-06
At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa ... 50 2e-06
At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative ... 50 2e-06
At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)... 49 3e-06
At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)... 49 3e-06
At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E... 49 3e-06
At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E... 49 3e-06
At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)... 49 3e-06
At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative ... 49 4e-06
At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative ... 49 4e-06
At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E... 48 5e-06
At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative ... 47 1e-05
At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative ... 47 2e-05
At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative ... 46 4e-05
At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family pro... 45 6e-05
At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)... 44 1e-04
At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E... 43 2e-04
At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative ... 42 6e-04
At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)... 41 8e-04
At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)... 41 8e-04
At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative ... 40 0.001
At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative ... 40 0.001
At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E... 40 0.002
At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)... 40 0.002
At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative ... 39 0.004
At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative ... 38 0.006
At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative ... 37 0.013
At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E... 33 0.28
At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E... 32 0.37
At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E... 32 0.37
At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E... 32 0.37
At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E... 32 0.48
At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E... 31 1.1
At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family pro... 30 1.5
At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family pro... 29 2.6
At5g19390.2 68418.m02311 pleckstrin homology (PH) domain-contain... 29 3.4
At5g19390.1 68418.m02310 pleckstrin homology (PH) domain-contain... 29 3.4
At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E... 29 3.4
At3g55160.1 68416.m06126 expressed protein 29 4.5
At1g64350.1 68414.m07292 transducin family protein / WD-40 repea... 28 7.9
>At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative
similar to Non-Canonical UBiquitin Conjugating Enzyme 1
(NCUBE1) from [Gallus gallus] GI:7362937, [Mus musculus]
GI:7363050, [Homo sapiens] GI:7362973; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 309
Score = 178 bits (433), Expect = 4e-45
Identities = 81/143 (56%), Positives = 102/143 (71%), Gaps = 1/143 (0%)
Frame = +3
Query: 33 EKYNTKCPGVKRLMREAIEL-AEATEEYCARPLEDNLFEWHFTVQGPKGTEFEGGIYHGR 209
E+YN K P VKR+++E E+ A ++++ + PLE+N+FEW F ++GP TEFEGGIYHGR
Sbjct: 4 ERYNRKNPAVKRILQEVKEMQANPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGR 63
Query: 210 ILLPKEYXXXXXXXXXXXXNGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFMPT 389
I LP +Y NGRFE N KICLSIS +HPE WQPSWS+RTAL+ALIAFMPT
Sbjct: 64 IQLPADYPFKPPSFMLLTPNGRFETNTKICLSISNYHPEHWQPSWSVRTALVALIAFMPT 123
Query: 390 PAEGRIGSLDYTPAERKILAKKS 458
G +GS+DY ER+ LA KS
Sbjct: 124 SPNGALGSVDYPKDERRTLAIKS 146
>At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 243
Score = 113 bits (273), Expect = 9e-26
Identities = 55/139 (39%), Positives = 80/139 (57%), Gaps = 1/139 (0%)
Frame = +3
Query: 60 VKRLMREAIELA-EATEEYCARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYXX 236
+KRL +E L E ARP +++ EWH+ ++G +GT F GG Y+G+I P EY
Sbjct: 7 IKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPY 66
Query: 237 XXXXXXXXXXNGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFMPTPAEGRIGSL 416
NGRF KKICLS+S HPE+W P WS+ + L L++FM + GS+
Sbjct: 67 KPPGITMTTPNGRFVTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSP-TTGSV 125
Query: 417 DYTPAERKILAKKSTNWSC 473
+ + AE++ LAK S ++C
Sbjct: 126 NTSVAEKQRLAKSSLAFNC 144
>At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 237
Score = 113 bits (273), Expect = 9e-26
Identities = 55/139 (39%), Positives = 78/139 (56%), Gaps = 1/139 (0%)
Frame = +3
Query: 60 VKRLMREAIELA-EATEEYCARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYXX 236
+KRL +E L E ARP +++ EWH+ ++G +GT F GG Y+G+I P EY
Sbjct: 7 IKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPY 66
Query: 237 XXXXXXXXXXNGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFMPTPAEGRIGSL 416
NGRF KKICLS+S HPE+W P WS+ + L L++FM GS+
Sbjct: 67 KPPGITMTTPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFM-MDTSPTTGSV 125
Query: 417 DYTPAERKILAKKSTNWSC 473
+ T E++ LAK S ++C
Sbjct: 126 NTTVIEKQRLAKSSLAFNC 144
>At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 52.0 bits (119), Expect = 4e-07
Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 3/113 (2%)
Frame = +3
Query: 63 KRLMREAIEL-AEATEEYCARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYXXX 239
+R+++E L +E A P EDN+ ++ + GP + +EGG++ + LP+EY
Sbjct: 8 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMA 67
Query: 240 XXXXXXXXXNGRFEINK--KICLSISGHHPETWQPSWSIRTALLALIAFMPTP 392
I+K +ICL I + W P+ IRT LL++ A + P
Sbjct: 68 APKVRFLTKIYHPNIDKLGRICLDIL---KDKWSPALQIRTVLLSIQALLSAP 117
>At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10)
identical to ubiquitin-conjugating enzyme COP10
[Arabidopsis thaliana] GI:20065779; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 182
Score = 51.2 bits (117), Expect = 7e-07
Identities = 35/122 (28%), Positives = 55/122 (45%), Gaps = 1/122 (0%)
Frame = +3
Query: 30 VEKYNTKCPGVKRLMREAIEL-AEATEEYCARPLEDNLFEWHFTVQGPKGTEFEGGIYHG 206
V K + G KR+ RE EL + + A P DNL+ W T+ GP GT +EGGI+
Sbjct: 29 VAKTSVSASG-KRIQREMAELNIDPPPDCSAGPKGDNLYHWIATIIGPSGTPYEGGIFFL 87
Query: 207 RILLPKEYXXXXXXXXXXXXNGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFMP 386
I+ P +Y ++ LS++ ++W P+ +I L A+ +
Sbjct: 88 DIIFPSDYPFKPPKLVFKTRIYHCNVDTAGDLSVNILR-DSWSPALTITKVLQAIRSIFL 146
Query: 387 TP 392
P
Sbjct: 147 KP 148
>At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 50.4 bits (115), Expect = 1e-06
Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 3/113 (2%)
Frame = +3
Query: 63 KRLMREAIEL-AEATEEYCARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYXXX 239
+R+++E L +E A P E+N+ ++ + GP + +EGG++ + LP+EY
Sbjct: 8 RRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMA 67
Query: 240 XXXXXXXXXNGRFEINK--KICLSISGHHPETWQPSWSIRTALLALIAFMPTP 392
I+K +ICL I + W P+ IRT LL++ A + P
Sbjct: 68 APKVRFLTKIYHPNIDKLGRICLDIL---KDKWSPALQIRTVLLSIQALLSAP 117
>At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 178
Score = 50.0 bits (114), Expect = 2e-06
Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 3/113 (2%)
Frame = +3
Query: 63 KRLMREAIELAEATEEYC-ARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEY--X 233
KR+++E +L + C A P+ +++F W T+ GP + + GG++ I P +Y
Sbjct: 34 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFK 93
Query: 234 XXXXXXXXXXXNGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFMPTP 392
+ N ICL I E W P+ +I LL++ + + P
Sbjct: 94 PPKVAFRTKVFHPNINSNGSICLDIL---KEQWSPALTISKVLLSICSLLTDP 143
>At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 148
Score = 50.0 bits (114), Expect = 2e-06
Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 3/113 (2%)
Frame = +3
Query: 63 KRLMREAIELAEATEEYC-ARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEY--X 233
KR+++E +L + C A P+ +++F W T+ GP + + GG++ I P +Y
Sbjct: 4 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFK 63
Query: 234 XXXXXXXXXXXNGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFMPTP 392
+ N ICL I E W P+ +I LL++ + + P
Sbjct: 64 PPKVAFRTKVFHPNINSNGSICLDIL---KEQWSPALTISKVLLSICSLLTDP 113
>At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative
identical or nearly so to Ubiquitin-conjugating enzymes
SP|P35132, SP|P35131, SP|P35133 from {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 49.6 bits (113), Expect = 2e-06
Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 3/113 (2%)
Frame = +3
Query: 63 KRLMREAIELAEATEEYC-ARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEY--X 233
KR+++E +L + C A P+ +++F W T+ GP + + GG++ I P +Y
Sbjct: 4 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFK 63
Query: 234 XXXXXXXXXXXNGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFMPTP 392
+ N ICL I E W P+ +I LL++ + + P
Sbjct: 64 PPKVAFRTKVFHPNVNSNGSICLDIL---KEQWSPALTISKVLLSICSLLTDP 113
>At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 49.2 bits (112), Expect = 3e-06
Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 3/113 (2%)
Frame = +3
Query: 63 KRLMREAIELAEATEEYC-ARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEY--X 233
KR+++E +L + C A P+ +++F W T+ GP + + GG++ I P +Y
Sbjct: 4 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPFK 63
Query: 234 XXXXXXXXXXXNGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFMPTP 392
+ N ICL I E W P+ +I LL++ + + P
Sbjct: 64 PPKVAFRTKVFHPNINSNGSICLDIL---KEQWSPALTISKVLLSICSLLTDP 113
>At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 49.2 bits (112), Expect = 3e-06
Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 3/113 (2%)
Frame = +3
Query: 63 KRLMREAIELAEATEEYC-ARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEY--X 233
KR+++E +L + C A P+ +++F W T+ GP + + GG++ I P +Y
Sbjct: 4 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPFK 63
Query: 234 XXXXXXXXXXXNGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFMPTP 392
+ N ICL I E W P+ +I LL++ + + P
Sbjct: 64 PPKVAFRTKVFHPNINSNGSICLDIL---KEQWSPALTISKVLLSICSLLTDP 113
>At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 49.2 bits (112), Expect = 3e-06
Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 3/113 (2%)
Frame = +3
Query: 63 KRLMREAIELAEATEEYC-ARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEY--X 233
KR+++E +L + C A P+ +++F W T+ GP + + GG++ I P +Y
Sbjct: 4 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFK 63
Query: 234 XXXXXXXXXXXNGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFMPTP 392
+ N ICL I E W P+ +I LL++ + + P
Sbjct: 64 PPKVAFRTKVFHPNINSNGSICLDIL---KEQWSPALTISKVLLSICSLLTDP 113
>At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 49.2 bits (112), Expect = 3e-06
Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 3/113 (2%)
Frame = +3
Query: 63 KRLMREAIELAEATEEYC-ARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEY--X 233
KR+++E +L + C A P+ +++F W T+ GP + + GG++ I P +Y
Sbjct: 4 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFK 63
Query: 234 XXXXXXXXXXXNGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFMPTP 392
+ N ICL I E W P+ +I LL++ + + P
Sbjct: 64 PPKVAFRTKVFHPNINSNGSICLDIL---KEQWSPALTISKVLLSICSLLTDP 113
>At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)
E2; identical to gi:12643427, SP:P35134
Length = 148
Score = 49.2 bits (112), Expect = 3e-06
Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 3/113 (2%)
Frame = +3
Query: 63 KRLMREAIELAEATEEYC-ARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEY--X 233
KR+++E +L + C A P+ +++F W T+ GP + + GG++ I P +Y
Sbjct: 4 KRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFK 63
Query: 234 XXXXXXXXXXXNGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFMPTP 392
+ N ICL I E W P+ +I LL++ + + P
Sbjct: 64 PPKVSFKTKVYHPNINSNGSICLDIL---KEQWSPALTISKVLLSICSLLTDP 113
>At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 48.8 bits (111), Expect = 4e-06
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 3/113 (2%)
Frame = +3
Query: 63 KRLMREAIELAEATEEYC-ARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEY--X 233
KR+ +E +L C A P D++F+W T+ GP + F GG++ I P +Y
Sbjct: 4 KRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYPFK 63
Query: 234 XXXXXXXXXXXNGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFMPTP 392
+ N ICL I E W P+ ++ LL++ + + P
Sbjct: 64 PPKVAFRTKVYHPNINSNGSICLDIL---KEQWSPALTVSKVLLSICSLLTDP 113
>At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 48.8 bits (111), Expect = 4e-06
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 3/113 (2%)
Frame = +3
Query: 63 KRLMREAIELAEATEEYC-ARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEY--X 233
KR+ +E +L C A P D++F+W T+ GP + F GG++ I P +Y
Sbjct: 4 KRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYPFK 63
Query: 234 XXXXXXXXXXXNGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFMPTP 392
+ N ICL I E W P+ ++ LL++ + + P
Sbjct: 64 PPKVAFRTKVYHPNINSNGSICLDIL---KEQWSPALTVSKVLLSICSLLTDP 113
>At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 149
Score = 48.4 bits (110), Expect = 5e-06
Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 4/114 (3%)
Frame = +3
Query: 63 KRLMREAIELAEATEEYC--ARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEY-- 230
KR+++E +L + C A P+ +++F W T+ GP + + GG++ I P +Y
Sbjct: 4 KRILKELKDLQKDPPTSCIFAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPF 63
Query: 231 XXXXXXXXXXXXNGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFMPTP 392
+ N ICL I E W P+ +I LL++ + + P
Sbjct: 64 KPPKVAFRTKVFHPNINSNGSICLDIL---KEQWSPALTISKVLLSICSLLTDP 114
>At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 112
Score = 47.2 bits (107), Expect = 1e-05
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Frame = +3
Query: 63 KRLMREAIEL-AEATEEYCARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYXXX 239
+R+++E L +E A P EDN+ ++ + GP + +EGG++ + LP+EY
Sbjct: 8 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMA 67
Query: 240 XXXXXXXXXNGRFEINK--KICLSISGHHPETWQPSWSIRTALL 365
I+K +ICL I + W P+ IRT LL
Sbjct: 68 APKVRFLTKIYHPNIDKLGRICLDIL---KDKWSPALQIRTVLL 108
>At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P35133 Ubiquitin-conjugating
enzyme E2-17 kDa 10 (EC 6.3.2.19) (Ubiquitin- protein
ligase 10) (Ubiquitin carrier protein 10) {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 46.8 bits (106), Expect = 2e-05
Identities = 28/113 (24%), Positives = 49/113 (43%), Gaps = 3/113 (2%)
Frame = +3
Query: 63 KRLMREAIELAEATEEYC-ARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEY--X 233
+R+++E EL C A P +++F W T+ GP + + GG++ I P +Y
Sbjct: 4 RRILKELKELQRDPPVSCSAGPTGEDMFHWQATIMGPNESPYSGGVFLVNIHFPPDYPFK 63
Query: 234 XXXXXXXXXXXNGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFMPTP 392
+ N ICL I + W P+ +I LL++ + + P
Sbjct: 64 PPKVVFRTKVFHPNINSNGNICLDIL---KDQWSPALTISKVLLSICSLLTDP 113
>At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative
similar to SP|O60015 Ubiquitin-conjugating enzyme E2-21
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) {Pichia angusta}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 157
Score = 45.6 bits (103), Expect = 4e-05
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 4/92 (4%)
Frame = +3
Query: 129 EDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEY----XXXXXXXXXXXXNGRFEINKKI 296
+ N+F+W ++GP T +EGG++ +P+ Y N F+ +I
Sbjct: 31 DTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPLQPPQVRFLTKIFHPNVHFKTG-EI 89
Query: 297 CLSISGHHPETWQPSWSIRTALLALIAFMPTP 392
CL I W P+W++++ A+IA M P
Sbjct: 90 CLDIL---KNAWSPAWTLQSVCRAIIALMAHP 118
>At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family
protein similar to Ubiquitin-conjugating enzyme E2-16
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) from {Schizosaccharomyces pombe}
SP|P46595, {Caenorhabditis elegans} SP|P35129; contains
Pfam profile PF00179: Ubiquitin-conjugating enzyme
Length = 154
Score = 44.8 bits (101), Expect = 6e-05
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Frame = +3
Query: 132 DNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYXXXXXXXXXXXXNGRFEINKK--ICLS 305
+N++EW ++GP GT +EGG+++ I P +Y IN + IC++
Sbjct: 34 NNIYEWTAVIRGPDGTPYEGGMFNLSIKFPTDYPFKPPKFTFKTPIYHPNINDEGSICMN 93
Query: 306 ISGHHPETWQPSWSIRTALLALIAFMPTP 392
I + W P+ + LL+++ + P
Sbjct: 94 IL---KDKWTPALMVEKVLLSILLLLEKP 119
>At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)
nearly identical to ubiquitin-conjugating enzyme UBC19
[Arabidopsis thaliana] GI:22530865; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 181
Score = 43.6 bits (98), Expect = 1e-04
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 3/114 (2%)
Frame = +3
Query: 60 VKRLMREAIELAEATEE-YCARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEY-- 230
+KRL E + L + A P EDN+F W T+ G K T FEG Y + +Y
Sbjct: 38 LKRLQSELMGLMMGADPGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPF 97
Query: 231 XXXXXXXXXXXXNGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFMPTP 392
+ ++ ICL I + W ++ +RT LL++ + + P
Sbjct: 98 KSPKVKFETCCFHPNVDLYGNICLDIL---QDKWSSAYDVRTILLSIQSLLGEP 148
>At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 145
Score = 43.2 bits (97), Expect = 2e-04
Identities = 27/104 (25%), Positives = 45/104 (43%), Gaps = 3/104 (2%)
Frame = +3
Query: 63 KRLMREAIELAEATEEYC-ARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEY--X 233
KR+++E +L + C A P+ +++F W T+ GP + + GG++ I P +Y
Sbjct: 4 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFK 63
Query: 234 XXXXXXXXXXXNGRFEINKKICLSISGHHPETWQPSWSIRTALL 365
+ N ICL I E W P+ +I L
Sbjct: 64 PPKVAFRTKVFHPNINSNGSICLDIL---KEQWSPALTISKVTL 104
>At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin conjugating enzyme
[Lycopersicon esculentum] GI:886679; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 192
Score = 41.5 bits (93), Expect = 6e-04
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Frame = +3
Query: 123 PLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYXXXXXXXXXXXXNGRFEINKK--- 293
P DNL T+ GP GT +EGG + I +P Y I+ +
Sbjct: 27 PKSDNLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYPFEPPKMQFSTKVWHPNISSQSGA 86
Query: 294 ICLSISGHHPETWQPSWSIRTALLALIAFMPTP 392
ICL I + W P+ +++TAL+++ A + P
Sbjct: 87 ICLDIL---KDQWSPALTLKTALVSIQALLSAP 116
>At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)
E2; identical to gi:992706
Length = 166
Score = 41.1 bits (92), Expect = 8e-04
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 12/100 (12%)
Frame = +3
Query: 129 EDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYXXXXXXXXXXXXNGRFEI--NKKICL 302
E N+FEW T+ GP T +EGG ++ + P+ Y + + ++C+
Sbjct: 31 EKNIFEWSVTIIGPPDTLYEGGFFYAIMSFPQNYPNSPPTVRFTSDIWHPNVYPDGRVCI 90
Query: 303 SI--------SGHH--PETWQPSWSIRTALLALIAFMPTP 392
SI SG+ E W P ++ + +L++I+ + P
Sbjct: 91 SILHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGP 130
>At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)
nearly identical to ubiquitin-conjugating enzyme UBC20
[Arabidopsis thaliana] GI:22530867; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 180
Score = 41.1 bits (92), Expect = 8e-04
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Frame = +3
Query: 117 ARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEY--XXXXXXXXXXXXNGRFEINK 290
A P EDN+F W T+ G K T FEG Y + +Y + ++
Sbjct: 57 AFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLSFSNDYPFKPPKVKFETCCFHPNVDVYG 116
Query: 291 KICLSISGHHPETWQPSWSIRTALLALIAFMPTP 392
ICL I + W ++ +RT LL++ + + P
Sbjct: 117 NICLDIL---QDKWSSAYDVRTILLSIQSLLGEP 147
>At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative
strong similar to ubiquitin-conjugating enzymes E2-17
from [Arabidopsis thaliana] SP|P35134, SP|P35132,
SP|P35133; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 149
Score = 40.3 bits (90), Expect = 0.001
Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 4/114 (3%)
Frame = +3
Query: 63 KRLMREAIELAEATEEYC-ARPL-EDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYXX 236
KR+ RE ++ C A P+ E+++F W T+ GP + + GG++ I +Y
Sbjct: 4 KRISRELRDMQRHPPANCSAGPVAEEDIFHWQATIMGPHDSPYSGGVFTVSIDFSSDYPF 63
Query: 237 XXXXXXXXXXNGRFEINKK--ICLSISGHHPETWQPSWSIRTALLALIAFMPTP 392
I+ K ICL I E W P+ + LL++ + + P
Sbjct: 64 KPPKVNFKTKVYHPNIDSKGSICLDIL---KEQWSPAPTTSKVLLSICSLLTDP 114
>At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 120
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Frame = +3
Query: 159 VQGPKGTEFEGGIYHGRILLPKEYXXXXXXXXXXXXNGRFEINK--KICLSISGHHPETW 332
+ GP + +EGG++ + LP+EY I+K +ICL I + W
Sbjct: 8 ILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDIL---KDKW 64
Query: 333 QPSWSIRTALLALIAFMPTP 392
P+ IRT LL++ A + P
Sbjct: 65 SPALQIRTVLLSIQALLSAP 84
>At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E2;
identical to gi:992703, SP:P42747
Length = 198
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 12/98 (12%)
Frame = +3
Query: 135 NLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYXXXXXXXXXXXXNGRFEI--NKKICLSI 308
N+FEW T+ GP T +EGG ++ + P+ Y + + ++C+SI
Sbjct: 65 NIFEWSVTIIGPPDTLYEGGFFNAIMTFPQNYPNSPPTVRFTSDMWHPNVYSDGRVCISI 124
Query: 309 --------SGHH--PETWQPSWSIRTALLALIAFMPTP 392
SG+ E W P ++ + +L++I+ + P
Sbjct: 125 LHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGP 162
>At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)
E2; UbcAT3; identical to gi:2129757, S46656
Length = 167
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/100 (24%), Positives = 45/100 (45%), Gaps = 12/100 (12%)
Frame = +3
Query: 129 EDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYXXXXXXXXXXXXNGRFEI--NKKICL 302
E N+F+W ++ GP T +EGG ++ + P+ Y + + K+C+
Sbjct: 32 EKNVFQWSVSIMGPPDTLYEGGFFNAIMSFPENYPVSPPTVTFTSEMWHPNVYSDGKVCI 91
Query: 303 SI---SGHHP-------ETWQPSWSIRTALLALIAFMPTP 392
SI G P E W P ++ + +L++I+ + P
Sbjct: 92 SILHPPGDDPHGYELASERWTPVHTVESIVLSIISMLSGP 131
>At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative
similar to Ubiquitin-conjugating enzyme E2
(Ubiquitin-protein ligase) (Ubiquitin carrier protein)
from {Xenopus laevis} SP|P51669, {Schizosaccharomyces
pombe} SP|P46595, {Caenorhabditis elegans} SP|P35129;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 409
Score = 38.7 bits (86), Expect = 0.004
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Frame = +3
Query: 159 VQGPKGTEFEGGIYHGRILLPKEY--XXXXXXXXXXXXNGRFEINKKICLSISGHHPE-T 329
++GP+ T + GI++ +I +P+ Y + + + +ICL I P+
Sbjct: 51 IEGPEDTVYANGIFNLKIQIPERYPFQPPIVSFATPIYHPNIDNSGRICLDILNLPPKGA 110
Query: 330 WQPSWSIRTAL--LALIAFMPTPAEG 401
WQPS +I T L + L+ P P +G
Sbjct: 111 WQPSLNISTVLTSMRLLLSEPNPDDG 136
>At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme from [Oryza
sativa] GI:1373001, {Arabidopsis thaliana} SP|P35134,
SP|P35131; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 177
Score = 38.3 bits (85), Expect = 0.006
Identities = 23/94 (24%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Frame = +3
Query: 123 PLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYXXXXXXXXXXXXNGRFEINK--KI 296
P +N+F W TV GP G +E G++ + +P +Y I++ +I
Sbjct: 54 PSPENIFRWEATVNGPVGCPYEKGVFTVSVHIPPKYPYEPPKITFKTKIFHPNISEIGEI 113
Query: 297 CLSISGHHPETWQPSWSIRTALLALIAFMPTPAE 398
+ I G W + +I LL++ + + P E
Sbjct: 114 FVDILG---SRWSSALTINLVLLSICSILSNPVE 144
>At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P50550 Ubiquitin-like protein
SUMO-1 conjugating enzyme (EC 6.3.2.19) (SUMO- 1-protein
ligase) (Ubiquitin carrier protein)
(Ubiquitin-conjugating enzyme UbcE2A) {Xenopus laevis};
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 160
Score = 37.1 bits (82), Expect = 0.013
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Frame = +3
Query: 135 NLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYXXXXXXXXXXXXNGRFEIN----KKICL 302
NL WH T+ G GT++EGG + + ++Y G F N +CL
Sbjct: 38 NLMVWHCTIPGKAGTDWEGGFFPLTMHFSEDY--PSKPPKCKFPQGFFHPNVYPSGTVCL 95
Query: 303 SISGHHPETWQPSWSIRTALLALIAFMPTP 392
SI + W+P+ +++ L+ + + TP
Sbjct: 96 SIL-NEDYGWRPAITVKQILVGIQDLLDTP 124
>At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E2;
identical to gi:431265, SP:P42748
Length = 187
Score = 32.7 bits (71), Expect = 0.28
Identities = 21/103 (20%), Positives = 43/103 (41%), Gaps = 6/103 (5%)
Frame = +3
Query: 108 EYCARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEY---XXXXXXXXXXXXNGRF 278
+Y + D + E++ GPK + ++GG++ R+ LP Y
Sbjct: 19 DYKVETINDGMQEFYVEFNGPKDSLYQGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVD 78
Query: 279 EINKKICLSISGHHPETWQPSW---SIRTALLALIAFMPTPAE 398
E++ +CL + +TW P + ++ L + P P++
Sbjct: 79 ELSGSVCLDVIN---QTWSPMFDLVNVFETFLPQLLLYPNPSD 118
>At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E2;
identical to gi:2689242, SP:P42745
Length = 152
Score = 32.3 bits (70), Expect = 0.37
Identities = 24/116 (20%), Positives = 46/116 (39%), Gaps = 3/116 (2%)
Frame = +3
Query: 54 PGVKRLMREAIELAEATEE-YCARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEY 230
P KRLMR+ L + P ++N+ W+ + GP T ++GG + + ++Y
Sbjct: 4 PARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDY 63
Query: 231 --XXXXXXXXXXXXNGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFMPTP 392
+ + ICL I + W P + + L ++ + + P
Sbjct: 64 PNKPPTVRFVSRMFHPNIYADGSICLDILQNQ---WSPIYDVAAILTSIQSLLCDP 116
>At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 32.3 bits (70), Expect = 0.37
Identities = 24/116 (20%), Positives = 46/116 (39%), Gaps = 3/116 (2%)
Frame = +3
Query: 54 PGVKRLMREAIELAEATEE-YCARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEY 230
P KRLMR+ L + P ++N+ W+ + GP T ++GG + + ++Y
Sbjct: 4 PARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDY 63
Query: 231 --XXXXXXXXXXXXNGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFMPTP 392
+ + ICL I + W P + + L ++ + + P
Sbjct: 64 PNKPPTVRFVSRMFHPNIYADGSICLDILQNQ---WSPIYDVAAILTSIQSLLCDP 116
>At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 32.3 bits (70), Expect = 0.37
Identities = 24/116 (20%), Positives = 46/116 (39%), Gaps = 3/116 (2%)
Frame = +3
Query: 54 PGVKRLMREAIELAEATEE-YCARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEY 230
P KRLMR+ L + P ++N+ W+ + GP T ++GG + + ++Y
Sbjct: 4 PARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDY 63
Query: 231 --XXXXXXXXXXXXNGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFMPTP 392
+ + ICL I + W P + + L ++ + + P
Sbjct: 64 PNKPPTVRFVSRMFHPNIYADGSICLDILQNQ---WSPIYDVAAILTSIQSLLCDP 116
>At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E2;
identical to gi:431269, SP:P42749
Length = 185
Score = 31.9 bits (69), Expect = 0.48
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +3
Query: 108 EYCARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEY 230
+Y + D + E+ GPK + +EGG++ R+ LP Y
Sbjct: 19 DYKVEMINDGMQEFFVEFSGPKDSIYEGGVWKIRVELPDAY 59
>At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E2;
identical to gi:431261, SP:P42746
Length = 150
Score = 30.7 bits (66), Expect = 1.1
Identities = 23/116 (19%), Positives = 46/116 (39%), Gaps = 3/116 (2%)
Frame = +3
Query: 54 PGVKRLMREAIELA-EATEEYCARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEY 230
P KRLM + L + P ++N+ W+ + GP+ T ++GG + + ++Y
Sbjct: 4 PAKKRLMWDFKRLQKDPPVGISGAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFTEDY 63
Query: 231 --XXXXXXXXXXXXNGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFMPTP 392
+ + ICL I + W P + + L ++ + + P
Sbjct: 64 PNKPPIVRFVSRMFHPNIYADGSICLDILQNQ---WSPIYDVAAVLTSIQSLLCDP 116
>At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 159
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +3
Query: 60 VKRLMREAIELAEATEEYCARPLEDNLFE-WHFTVQGPKGTEFEGGIYHGRILLPKEY 230
++ L R + + T Y +D L + W T+ GP T +EG I+ ++ K+Y
Sbjct: 17 LEELERGEKGIGDGTVSYGMDDADDILMQSWTGTILGPHNTAYEGKIFQLKLFCGKDY 74
>At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 158
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 60 VKRLMREAIELAEATEEYCARPLEDNLFE-WHFTVQGPKGTEFEGGIYHGRILLPKEY 230
++ L R + + T Y +D + W T+ GP T +EG I+ ++ KEY
Sbjct: 17 LEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTILGPPNTAYEGKIFQLKLFCGKEY 74
>At5g19390.2 68418.m02311 pleckstrin homology (PH) domain-containing
protein / RhoGAP domain-containing protein weak
similarity to rho-GTPase activating protein [Homo
sapiens] GI:14245732; contains Pfam profiles PF00169: PH
domain, PF00620: RhoGAP domain
Length = 870
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 9 LNKMAEIVEKYNTKCPGVKRLMREAIELAEATEEY 113
L K + +EKY TK G+ R + E+ +EY
Sbjct: 179 LEKALQFIEKYGTKIEGILRQSADVEEVERRVQEY 213
>At5g19390.1 68418.m02310 pleckstrin homology (PH) domain-containing
protein / RhoGAP domain-containing protein weak
similarity to rho-GTPase activating protein [Homo
sapiens] GI:14245732; contains Pfam profiles PF00169: PH
domain, PF00620: RhoGAP domain
Length = 822
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 9 LNKMAEIVEKYNTKCPGVKRLMREAIELAEATEEY 113
L K + +EKY TK G+ R + E+ +EY
Sbjct: 179 LEKALQFIEKYGTKIEGILRQSADVEEVERRVQEY 213
>At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E2;
identical to gi|431267, SP:P42750, PIR:S52661; contains
a ubiquitin-conjugating enzymes active site (PDOC00163)
Length = 183
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/41 (26%), Positives = 24/41 (58%)
Frame = +3
Query: 108 EYCARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEY 230
+Y + D+L ++ T GP + ++GG++ ++ LP+ Y
Sbjct: 19 DYKVDTVNDDLQMFYVTFHGPTDSLYQGGVWKIKVELPEAY 59
>At3g55160.1 68416.m06126 expressed protein
Length = 2149
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +3
Query: 3 LKLNKMAEIVEKYNTKCPGVKRLMREAIELAEATEEYCARPLEDNLF 143
L L ++ + +++T K L + IEL EA + + PL N+F
Sbjct: 1994 LGLYVFSDCIFRFSTDSNDKKTLFSDIIELGEALKPFLRNPLVSNMF 2040
>At1g64350.1 68414.m07292 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to nuclear pore protein SEH1 (SP:P53011)
[Saccharomyces cerevisiae]
Length = 326
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 270 GRFEINKKICLSISGHHPETWQPSWSIRTALLA 368
GR + KK+ S+SGH E WQ W + LA
Sbjct: 266 GRLPV-KKVS-SLSGHQGEVWQMEWDMSGMTLA 296
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,504,366
Number of Sequences: 28952
Number of extensions: 269569
Number of successful extensions: 620
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 602
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 612
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1721869952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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