Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0231
         (760 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071154-1|AAL48776.1|  176|Drosophila melanogaster RE18415p pro...    63   3e-10
AE014297-2125|AAF55257.1|  176|Drosophila melanogaster CG5516-PA...    63   3e-10
M14954-1|AAA70221.1|  426|Drosophila melanogaster putative ORF1 ...    29   5.2  
AJ302712-1|CAC16870.1|  433|Drosophila melanogaster gag protein.       29   6.9  
AJ278684-1|CAB99191.1|  488|Drosophila melanogaster gag-like pro...    29   6.9  

>AY071154-1|AAL48776.1|  176|Drosophila melanogaster RE18415p
           protein.
          Length = 176

 Score = 63.3 bits (147), Expect = 3e-10
 Identities = 29/52 (55%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
 Frame = +1

Query: 100 MTL-GTYNRHQAERKKQXXXXXXFPQGIRCQKCLEFGHWSYECKGKRKILVR 252
           MTL G   R  A++K+       FP GIRCQKCL+ GHWSYECK KRK + R
Sbjct: 1   MTLVGLAARKLAQKKRSAKQAADFPNGIRCQKCLQIGHWSYECKEKRKYVHR 52


>AE014297-2125|AAF55257.1|  176|Drosophila melanogaster CG5516-PA
           protein.
          Length = 176

 Score = 63.3 bits (147), Expect = 3e-10
 Identities = 29/52 (55%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
 Frame = +1

Query: 100 MTL-GTYNRHQAERKKQXXXXXXFPQGIRCQKCLEFGHWSYECKGKRKILVR 252
           MTL G   R  A++K+       FP GIRCQKCL+ GHWSYECK KRK + R
Sbjct: 1   MTLVGLAARKLAQKKRSAKQAADFPNGIRCQKCLQIGHWSYECKEKRKYVHR 52


>M14954-1|AAA70221.1|  426|Drosophila melanogaster putative ORF1
           protein.
          Length = 426

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +1

Query: 169 PQGIRCQKCLEFGHWSYECK 228
           P  +RC+KCL FGH +  CK
Sbjct: 183 PLPLRCKKCLRFGHPTPICK 202


>AJ302712-1|CAC16870.1|  433|Drosophila melanogaster gag protein.
          Length = 433

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
 Frame = +1

Query: 169 PQGIRCQKCLEFGHWSYECKGKRKIL---VRPHVHESCIRI 282
           P  +RC+ C   GH S  CK     +   + PH+   C RI
Sbjct: 199 PNPMRCKSCQLLGHTSKHCKNPPACVSCNLAPHLPVPCTRI 239


>AJ278684-1|CAB99191.1|  488|Drosophila melanogaster gag-like
           protein protein.
          Length = 488

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = +1

Query: 178 IRCQKCLEFGHWSYECK 228
           IRC +CLEFGH +  CK
Sbjct: 407 IRCFRCLEFGHRAPYCK 423


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,079,551
Number of Sequences: 53049
Number of extensions: 461733
Number of successful extensions: 1807
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1801
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3478915869
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)