Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0228
(777 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholo... 27 0.22
AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless prot... 25 0.68
AM292336-1|CAL23148.2| 455|Tribolium castaneum gustatory recept... 23 3.6
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 22 4.8
U77974-1|AAB36556.1| 276|Tribolium castaneum transcription fact... 21 8.3
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 21 8.3
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 21 8.3
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 21 8.3
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 21 8.3
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 21 8.3
AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax pr... 21 8.3
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 21 8.3
>AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholog
protein.
Length = 406
Score = 26.6 bits (56), Expect = 0.22
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +2
Query: 179 AAPPTKLLCEGRRSLPHSWPLSLPKV 256
A PPT LC LP PL LP +
Sbjct: 163 ALPPTGFLCNNYPPLPQVPPLPLPPI 188
>AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless
protein.
Length = 302
Score = 25.0 bits (52), Expect = 0.68
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +2
Query: 179 AAPPTKLLCEGRRSLPHSWPLSLPKVRA 262
A PP LC LP PL LP + A
Sbjct: 163 ALPPAGFLCNNYLPLPQVPPLPLPPIFA 190
>AM292336-1|CAL23148.2| 455|Tribolium castaneum gustatory receptor
candidate 15 protein.
Length = 455
Score = 22.6 bits (46), Expect = 3.6
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2
Query: 152 LFVTLFIKNTILKSLVQ 102
LFV L + N +LK LV+
Sbjct: 160 LFVLLIVSNVVLKILVE 176
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 22.2 bits (45), Expect = 4.8
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = -3
Query: 436 PGNVCRVCPG 407
PG C+ CPG
Sbjct: 101 PGRCCKTCPG 110
>U77974-1|AAB36556.1| 276|Tribolium castaneum transcription factor
homolog protein.
Length = 276
Score = 21.4 bits (43), Expect = 8.3
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +3
Query: 171 WMQPRRPPNCSARVDEAFPTAGHSHXPKFARS 266
W Q RR + R+ A+P A P FA S
Sbjct: 118 WFQNRRMKDKRQRMAIAWPYAAVYTDPAFAAS 149
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.4 bits (43), Expect = 8.3
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +1
Query: 592 MYVIPFSMGPVGSPLSED 645
M ++P+ M P G P D
Sbjct: 284 MNIVPYHMSPYGHPYQFD 301
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.4 bits (43), Expect = 8.3
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +1
Query: 592 MYVIPFSMGPVGSPLSED 645
M ++P+ M P G P D
Sbjct: 284 MNIVPYHMSPYGHPYQFD 301
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.4 bits (43), Expect = 8.3
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +1
Query: 592 MYVIPFSMGPVGSPLSED 645
M ++P+ M P G P D
Sbjct: 284 MNIVPYHMSPYGHPYQFD 301
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 21.4 bits (43), Expect = 8.3
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +1
Query: 592 MYVIPFSMGPVGSPLSED 645
M ++P+ M P G P D
Sbjct: 240 MNIVPYHMSPYGHPYQFD 257
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 21.4 bits (43), Expect = 8.3
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +1
Query: 592 MYVIPFSMGPVGSPLSED 645
M ++P+ M P G P D
Sbjct: 284 MNIVPYHMSPYGHPYQFD 301
>AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax
protein.
Length = 100
Score = 21.4 bits (43), Expect = 8.3
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +1
Query: 592 MYVIPFSMGPVGSPLSED 645
M ++P+ M P G P D
Sbjct: 72 MNIVPYHMSPYGHPYQFD 89
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 21.4 bits (43), Expect = 8.3
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +1
Query: 592 MYVIPFSMGPVGSPLSED 645
M ++P+ M P G P D
Sbjct: 284 MNIVPYHMSPYGHPYQFD 301
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,341
Number of Sequences: 336
Number of extensions: 3545
Number of successful extensions: 23
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20961338
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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