BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0228
(777 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y00402-1|CAA68463.1| 647|Drosophila melanogaster protein ( Dros... 106 3e-23
BT003447-1|AAO39450.1| 647|Drosophila melanogaster RH57538p pro... 106 3e-23
AE013599-2715|AAF57676.1| 647|Drosophila melanogaster CG17725-P... 106 3e-23
AY094852-1|AAM11205.1| 638|Drosophila melanogaster RE12569p pro... 92 7e-19
AE013599-2714|AAF57677.1| 638|Drosophila melanogaster CG10924-P... 92 7e-19
AE013599-2716|AAM68462.1| 500|Drosophila melanogaster CG17725-P... 74 2e-13
AE014297-112|ABI31134.1| 823|Drosophila melanogaster CG41467-PA... 33 0.44
AF313480-1|AAG29546.1| 2797|Drosophila melanogaster gamma dynein... 30 3.1
BT025047-1|ABE73218.1| 775|Drosophila melanogaster IP16401p pro... 30 4.1
AY094724-1|AAM11077.1| 788|Drosophila melanogaster GH21171p pro... 29 5.4
AE014134-3368|AAF53983.2| 2759|Drosophila melanogaster CG8677-PA... 29 5.4
>Y00402-1|CAA68463.1| 647|Drosophila melanogaster protein (
Drosophila melanogastermRNA for phosphoenolpyruvate
carboxykinase (GTP) (PEPCK,EC 4.1.1.32). ).
Length = 647
Score = 106 bits (255), Expect = 3e-23
Identities = 49/89 (55%), Positives = 59/89 (66%)
Frame = +2
Query: 254 VRAFVERRHALCQPEHVHVCDGSETEARAXXXXXXXXXXXKRLPQYDNCWLARTDPADVA 433
VRAFVE ALCQP+ VH+CDGSE E + LP+YDNCWLART+PADVA
Sbjct: 52 VRAFVEEGIALCQPDQVHICDGSEQENKVLIKSLLEAGTIVPLPKYDNCWLARTNPADVA 111
Query: 434 RVESRTFICSDREXDVVPSARAGQKPXWG 520
RVESRTFIC++R + +P+ G K G
Sbjct: 112 RVESRTFICTERREETIPTPVEGVKGTLG 140
Score = 86.6 bits (205), Expect = 3e-17
Identities = 39/58 (67%), Positives = 46/58 (79%)
Frame = +1
Query: 505 EAALGNYISPPXYEKAVSDRFPGCMKGRXMYVIPFSMGPVGSPLSEDSGVEITDSPYV 678
+ LGN+ISP + AV RFPGCMKGR MYV+PFSMGPVGSPLS+ G+E+TDS YV
Sbjct: 136 KGTLGNWISPSDMDAAVQQRFPGCMKGRTMYVVPFSMGPVGSPLSK-IGIELTDSAYV 192
>BT003447-1|AAO39450.1| 647|Drosophila melanogaster RH57538p
protein.
Length = 647
Score = 106 bits (255), Expect = 3e-23
Identities = 49/89 (55%), Positives = 59/89 (66%)
Frame = +2
Query: 254 VRAFVERRHALCQPEHVHVCDGSETEARAXXXXXXXXXXXKRLPQYDNCWLARTDPADVA 433
VRAFVE ALCQP+ VH+CDGSE E + LP+YDNCWLART+PADVA
Sbjct: 52 VRAFVEEGIALCQPDQVHICDGSEQENKVLIKSLLEAGTIVPLPKYDNCWLARTNPADVA 111
Query: 434 RVESRTFICSDREXDVVPSARAGQKPXWG 520
RVESRTFIC++R + +P+ G K G
Sbjct: 112 RVESRTFICTERREETIPTPVEGVKGTLG 140
Score = 86.6 bits (205), Expect = 3e-17
Identities = 39/58 (67%), Positives = 46/58 (79%)
Frame = +1
Query: 505 EAALGNYISPPXYEKAVSDRFPGCMKGRXMYVIPFSMGPVGSPLSEDSGVEITDSPYV 678
+ LGN+ISP + AV RFPGCMKGR MYV+PFSMGPVGSPLS+ G+E+TDS YV
Sbjct: 136 KGTLGNWISPSDMDAAVQQRFPGCMKGRTMYVVPFSMGPVGSPLSK-IGIELTDSAYV 192
>AE013599-2715|AAF57676.1| 647|Drosophila melanogaster CG17725-PA,
isoform A protein.
Length = 647
Score = 106 bits (255), Expect = 3e-23
Identities = 49/89 (55%), Positives = 59/89 (66%)
Frame = +2
Query: 254 VRAFVERRHALCQPEHVHVCDGSETEARAXXXXXXXXXXXKRLPQYDNCWLARTDPADVA 433
VRAFVE ALCQP+ VH+CDGSE E + LP+YDNCWLART+PADVA
Sbjct: 52 VRAFVEEGIALCQPDQVHICDGSEQENKVLIKSLLEAGTIVPLPKYDNCWLARTNPADVA 111
Query: 434 RVESRTFICSDREXDVVPSARAGQKPXWG 520
RVESRTFIC++R + +P+ G K G
Sbjct: 112 RVESRTFICTERREETIPTPVEGVKGTLG 140
Score = 86.6 bits (205), Expect = 3e-17
Identities = 39/58 (67%), Positives = 46/58 (79%)
Frame = +1
Query: 505 EAALGNYISPPXYEKAVSDRFPGCMKGRXMYVIPFSMGPVGSPLSEDSGVEITDSPYV 678
+ LGN+ISP + AV RFPGCMKGR MYV+PFSMGPVGSPLS+ G+E+TDS YV
Sbjct: 136 KGTLGNWISPSDMDAAVQQRFPGCMKGRTMYVVPFSMGPVGSPLSK-IGIELTDSAYV 192
>AY094852-1|AAM11205.1| 638|Drosophila melanogaster RE12569p
protein.
Length = 638
Score = 92.3 bits (219), Expect = 7e-19
Identities = 40/80 (50%), Positives = 53/80 (66%)
Frame = +2
Query: 248 PKVRAFVERRHALCQPEHVHVCDGSETEARAXXXXXXXXXXXKRLPQYDNCWLARTDPAD 427
P V+ +VE+ LCQPE VH+CDG+E E++ LP+Y+NCWLART+PAD
Sbjct: 41 PAVKQYVEKCVELCQPERVHICDGTEVESKLLQGIMLKKGTIIPLPKYENCWLARTNPAD 100
Query: 428 VARVESRTFICSDREXDVVP 487
VARVE +TFI +D + VP
Sbjct: 101 VARVEGKTFISTDSKEQTVP 120
Score = 86.6 bits (205), Expect = 3e-17
Identities = 39/55 (70%), Positives = 46/55 (83%)
Frame = +1
Query: 514 LGNYISPPXYEKAVSDRFPGCMKGRXMYVIPFSMGPVGSPLSEDSGVEITDSPYV 678
LGN+I+ + A+ +RFPGCMKGR MYVIPFSMGPVGSPLS+ G+EITDSPYV
Sbjct: 130 LGNWIAEKDMQAAIKERFPGCMKGRTMYVIPFSMGPVGSPLSK-IGIEITDSPYV 183
>AE013599-2714|AAF57677.1| 638|Drosophila melanogaster CG10924-PA
protein.
Length = 638
Score = 92.3 bits (219), Expect = 7e-19
Identities = 40/80 (50%), Positives = 53/80 (66%)
Frame = +2
Query: 248 PKVRAFVERRHALCQPEHVHVCDGSETEARAXXXXXXXXXXXKRLPQYDNCWLARTDPAD 427
P V+ +VE+ LCQPE VH+CDG+E E++ LP+Y+NCWLART+PAD
Sbjct: 41 PAVKQYVEKCVELCQPERVHICDGTEVESKLLQGIMLKKGTIIPLPKYENCWLARTNPAD 100
Query: 428 VARVESRTFICSDREXDVVP 487
VARVE +TFI +D + VP
Sbjct: 101 VARVEGKTFISTDSKEQTVP 120
Score = 86.6 bits (205), Expect = 3e-17
Identities = 39/55 (70%), Positives = 46/55 (83%)
Frame = +1
Query: 514 LGNYISPPXYEKAVSDRFPGCMKGRXMYVIPFSMGPVGSPLSEDSGVEITDSPYV 678
LGN+I+ + A+ +RFPGCMKGR MYVIPFSMGPVGSPLS+ G+EITDSPYV
Sbjct: 130 LGNWIAEKDMQAAIKERFPGCMKGRTMYVIPFSMGPVGSPLSK-IGIEITDSPYV 183
>AE013599-2716|AAM68462.1| 500|Drosophila melanogaster CG17725-PB,
isoform B protein.
Length = 500
Score = 74.1 bits (174), Expect = 2e-13
Identities = 33/45 (73%), Positives = 38/45 (84%)
Frame = +1
Query: 544 EKAVSDRFPGCMKGRXMYVIPFSMGPVGSPLSEDSGVEITDSPYV 678
+ AV RFPGCMKGR MYV+PFSMGPVGSPLS+ G+E+TDS YV
Sbjct: 2 DAAVQQRFPGCMKGRTMYVVPFSMGPVGSPLSK-IGIELTDSAYV 45
>AE014297-112|ABI31134.1| 823|Drosophila melanogaster CG41467-PA,
isoform A protein.
Length = 823
Score = 33.1 bits (72), Expect = 0.44
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = +3
Query: 99 KLHEAFQDGVFYKERYEEMCSSG-DWMQPRRPPNCSARVDEAFPTAGHSHXPKFARSWSA 275
+L A D V K +E+ +G D++ P PN RV P P + ++A
Sbjct: 408 RLMAAVDDPVLCKRLAKEILDNGVDYLAPH--PNW--RVMACNPNKYIPRPPATEQDFNA 463
Query: 276 GMLCASRSTCTCATAPRQRRGHC 344
+ CAS C C PR+ R HC
Sbjct: 464 RVACASVDKCPC---PREARKHC 483
>AF313480-1|AAG29546.1| 2797|Drosophila melanogaster gamma dynein
protein.
Length = 2797
Score = 30.3 bits (65), Expect = 3.1
Identities = 9/32 (28%), Positives = 17/32 (53%)
Frame = +2
Query: 377 RLPQYDNCWLARTDPADVARVESRTFICSDRE 472
++PQ+ NCW+ P D +E+ + D +
Sbjct: 725 KVPQHQNCWIVLDGPVDAVWIENLNSVLDDNK 756
>BT025047-1|ABE73218.1| 775|Drosophila melanogaster IP16401p
protein.
Length = 775
Score = 29.9 bits (64), Expect = 4.1
Identities = 22/82 (26%), Positives = 32/82 (39%)
Frame = +3
Query: 210 VDEAFPTAGHSHXPKFARSWSAGMLCASRSTCTCATAPRQRRGHCYS*CSSRPPSNDCPN 389
VDEA GH H +F RSW+ +S A + + S +S P
Sbjct: 607 VDEA-ENFGHCHVVEFLRSWAEKADQSSEECKPEAVTSKTQADEVSSSSNSSSSPGSSPG 665
Query: 390 TITVGWPGQTRQTLPGLNPARS 455
+ PG + + PG +P S
Sbjct: 666 SSPGSSPGSSPGSSPGSSPGSS 687
>AY094724-1|AAM11077.1| 788|Drosophila melanogaster GH21171p
protein.
Length = 788
Score = 29.5 bits (63), Expect = 5.4
Identities = 19/68 (27%), Positives = 26/68 (38%)
Frame = +3
Query: 300 TCTCATAPRQRRGHCYS*CSSRPPSNDCPNTITVGWPGQTRQTLPGLNPARSYALIGRXT 479
T T +T R + + PS + P R P LNP R+ + G
Sbjct: 442 TSTPSTTTNSRPAYLHGAEHHGGPSGPPMGGVFSSGPPPARHATPHLNPYRAPPIYGNPN 501
Query: 480 WSPRLAPA 503
+SPRL A
Sbjct: 502 YSPRLGGA 509
>AE014134-3368|AAF53983.2| 2759|Drosophila melanogaster CG8677-PA
protein.
Length = 2759
Score = 29.5 bits (63), Expect = 5.4
Identities = 19/68 (27%), Positives = 26/68 (38%)
Frame = +3
Query: 300 TCTCATAPRQRRGHCYS*CSSRPPSNDCPNTITVGWPGQTRQTLPGLNPARSYALIGRXT 479
T T +T R + + PS + P R P LNP R+ + G
Sbjct: 2413 TSTPSTTTNSRPAYLHGAEHHGGPSGPPMGGVFSSGPPPARHATPHLNPYRAPPIYGNPN 2472
Query: 480 WSPRLAPA 503
+SPRL A
Sbjct: 2473 YSPRLGGA 2480
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,876,129
Number of Sequences: 53049
Number of extensions: 740684
Number of successful extensions: 2045
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2037
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3602427675
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -