Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0227
         (776 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g67970.1 68414.m07764 heat shock factor protein, putative (HS...    30   2.0  
At1g54020.2 68414.m06155 myrosinase-associated protein, putative...    29   4.5  
At2g18250.1 68415.m02128 cytidylyltransferase domain-containing ...    28   7.9  

>At1g67970.1 68414.m07764 heat shock factor protein, putative (HSF5)
           / heat shock transcription factor, putative (HSTF5)
           identical to heat shock transcription factor 5 (HSF5)
           SP:Q9S7U5 from [Arabidopsis thaliana]; contains Pfam
           profile: PF00447 HSF-type DNA-binding domain
          Length = 374

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = -3

Query: 288 GRWCEATIRGISLNASKAEASLAESGKDMLTVEPRESGGSKQCD 157
           G W +  +   S   +K + ++ + GKD LT+E  E  G+ + D
Sbjct: 286 GAWEKLLLLSPSRKKTKKQENIVKKGKDDLTLEEEEEDGTMELD 329


>At1g54020.2 68414.m06155 myrosinase-associated protein, putative
           strong similarity to myrosinase-associated proteins
           GI:1769968, GI:1769970, GI:1216389,GI:1216391 from
           [Brassica napus]; contains InterPro Entry IPR001087
           Lipolytic enzyme, G-D-S-L family
          Length = 372

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = -2

Query: 541 LACGSXSVHSDLLFDXSMSALPIIAKQNSPSVGLFT 434
           + C S SV   LL    +  L  I+ QN P+VGLFT
Sbjct: 1   MECSSVSVLGILLVFPLLHNLVTISGQNLPAVGLFT 36


>At2g18250.1 68415.m02128 cytidylyltransferase domain-containing
           protein similar to CoA synthase [Mus musculus]
           GI:21780289, bifunctional phosphopantetheine adenylyl
           transferase / dephospho CoA kinase [Sus scrofa]
           GI:20465246; contains Pfam profile PF01467:
           Cytidylyltransferase
          Length = 176

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/58 (22%), Positives = 31/58 (53%)
 Frame = -3

Query: 261 GISLNASKAEASLAESGKDMLTVEPRESGGSKQCDFTSRVSHSKRETRRRSPFGSRRS 88
           G+S+N  +AE  L++   +++ +    S G+K    T R   +++ ++++ P   + S
Sbjct: 119 GLSVNRKRAERGLSQLKIEVVEIVSDGSSGNKISSSTLRKMEAEKASKQKQPAEEKAS 176


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,170,697
Number of Sequences: 28952
Number of extensions: 313988
Number of successful extensions: 698
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 698
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1736283200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)