Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0226
         (754 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    29   0.20 
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    29   0.20 
CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.          25   2.5  

>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 28.7 bits (61), Expect = 0.20
 Identities = 17/71 (23%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
 Frame = +2

Query: 320 VPTSVDSSFPRIFKILQSCYQCIMGSVDDC--WT*FSLFSCNFELSGSVIR*TCNIVGIY 493
           +   ++ +  +I K+ Q+  QC+  S  +   ++ +S  +C  E    +I   C      
Sbjct: 326 ITPKINDAADQIRKVAQAQRQCVFASEANLSYYSVYSRNNCELECEAKLILENC------ 379

Query: 494 GSICYFLPKIY 526
           G + Y+LPK+Y
Sbjct: 380 GCVLYYLPKLY 390


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 28.7 bits (61), Expect = 0.20
 Identities = 17/71 (23%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
 Frame = +2

Query: 320 VPTSVDSSFPRIFKILQSCYQCIMGSVDDC--WT*FSLFSCNFELSGSVIR*TCNIVGIY 493
           +   ++ +  +I K+ Q+  QC+  S  +   ++ +S  +C  E    +I   C      
Sbjct: 326 ITPKINDAADQIRKVAQAQRQCVFASEANLSYYSVYSRNNCELECEAKLILENC------ 379

Query: 494 GSICYFLPKIY 526
           G + Y+LPK+Y
Sbjct: 380 GCVLYYLPKLY 390


>CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.
          Length = 295

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
 Frame = -2

Query: 732 HRSXRRYHTSAFNSGQFLA--PRIPWRVKLVSLMRTH*LLDAL 610
           +RS    H    + G   A  PR+ WR+K++ L R + +L  L
Sbjct: 217 YRSISSLHAPPSHPGAHRAAEPRLDWRIKILPLPRWNTVLACL 259


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 818,730
Number of Sequences: 2352
Number of extensions: 18162
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77755161
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)