Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0226
(754 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF047653-1|AAC04458.2| 272|Caenorhabditis elegans Hypothetical ... 80 1e-15
AL034393-17|CAA22315.1| 503|Caenorhabditis elegans Hypothetical... 31 0.88
Z95622-1|CAB09132.2| 480|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z68131-3|CAA92219.2| 480|Caenorhabditis elegans Hypothetical pr... 31 1.2
AF497823-1|AAM18101.1| 479|Caenorhabditis elegans putative Na-H... 31 1.2
U55369-1|AAK52175.1| 1247|Caenorhabditis elegans Cystic fibrosis... 29 2.7
DQ917240-1|ABI94563.1| 1797|Caenorhabditis elegans four domain-t... 29 4.7
AY555271-1|AAS65871.2| 1831|Caenorhabditis elegans four domain-t... 29 4.7
AF045640-6|AAU05588.1| 1562|Caenorhabditis elegans Novel channel... 29 4.7
AF045640-5|AAM81121.1| 1913|Caenorhabditis elegans Novel channel... 29 4.7
AF045640-4|AAU05590.1| 1861|Caenorhabditis elegans Novel channel... 29 4.7
Z81077-4|CAB03071.3| 618|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z35719-3|CAA84797.1| 347|Caenorhabditis elegans Hypothetical pr... 28 6.2
AF045640-7|AAU05589.1| 978|Caenorhabditis elegans Novel channel... 28 6.2
Z49071-7|CAA88880.2| 211|Caenorhabditis elegans Hypothetical pr... 28 8.2
U37548-10|AAR30210.1| 1418|Caenorhabditis elegans Calcium channe... 28 8.2
U37548-9|AAR25651.1| 1852|Caenorhabditis elegans Calcium channel... 28 8.2
U37548-8|AAM51534.1| 1837|Caenorhabditis elegans Calcium channel... 28 8.2
U37548-7|AAR25652.1| 1885|Caenorhabditis elegans Calcium channel... 28 8.2
U37548-6|AAR25653.1| 1844|Caenorhabditis elegans Calcium channel... 28 8.2
U28733-2|AAA68303.3| 381|Caenorhabditis elegans Hypothetical pr... 28 8.2
AY322480-1|AAP84337.1| 1844|Caenorhabditis elegans T-type voltag... 28 8.2
AY313900-1|AAP79883.1| 1852|Caenorhabditis elegans T-type calciu... 28 8.2
AY313899-1|AAP79882.1| 1885|Caenorhabditis elegans T-type calciu... 28 8.2
AY313898-1|AAP79881.1| 1837|Caenorhabditis elegans T-type calciu... 28 8.2
AY275709-1|AAP31908.1| 211|Caenorhabditis elegans cell junction... 28 8.2
AF368920-1|AAK53427.1| 1837|Caenorhabditis elegans voltage-depen... 28 8.2
AF039716-1|AAY55879.1| 82|Caenorhabditis elegans Hypothetical ... 28 8.2
>AF047653-1|AAC04458.2| 272|Caenorhabditis elegans Hypothetical
protein W02F12.2 protein.
Length = 272
Score = 80.2 bits (189), Expect = 1e-15
Identities = 47/138 (34%), Positives = 76/138 (55%), Gaps = 3/138 (2%)
Frame = +3
Query: 258 YSISPLIAEFVNTVSNILFFLFPPVLIHLFQEYSKFFNPAINVLWVLLMIVGLSSAYFHA 437
Y P +AEF NT +N+ + P V I L + Y N + +LL GL+S Y+HA
Sbjct: 25 YQTLPYVAEFANTCTNLPIIVLPLVNIMLLRRYLHDVNGGLIFPQLLLTFNGLASTYYHA 84
Query: 438 TLSLVGQLLDELAILWVFMAAFAISCLKYIFRNFWEETGEYLALYSSVFSVMS---TGFL 608
TL+L GQL+DEL+++W+ + F + + + + F E+ + L L V +++ +G
Sbjct: 85 TLNLFGQLVDELSLVWI-ITVFLVVYIP-VMKWFPEKFSKRLTLVRWVVLIVTALVSGLC 142
Query: 609 VMHPAANAFALMTLALPA 662
+ P NA ALM ++PA
Sbjct: 143 FLEPNLNAIALMLFSIPA 160
>AL034393-17|CAA22315.1| 503|Caenorhabditis elegans Hypothetical
protein Y18D10A.23 protein.
Length = 503
Score = 31.1 bits (67), Expect = 0.88
Identities = 25/101 (24%), Positives = 48/101 (47%)
Frame = +3
Query: 372 PAINVLWVLLMIVGLSSAYFHATLSLVGQLLDELAILWVFMAAFAISCLKYIFRNFWEET 551
P+I + WV I L +A+ T+ +V L + W+ + C + + R F
Sbjct: 297 PSIQLTWVAQTINILITAHILPTIIIVLSPLSQQVEEWIKIPN-QFGCRRVLVRTFIL-- 353
Query: 552 GEYLALYSSVFSVMSTGFLVMHPAANAFALMTLALPAMGFL 674
+L +++++ SV+ G + A LMT+ LP++ +L
Sbjct: 354 --FLVMFTAL-SVLKLGLFLDLVGATTITLMTMLLPSIFWL 391
>Z95622-1|CAB09132.2| 480|Caenorhabditis elegans Hypothetical
protein B0395.1 protein.
Length = 480
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Frame = +3
Query: 306 ILFFLFPPVLIHLFQEYSKFFNPAINVLWVLLMIVGLSSAYFHATLSLVGQL--LDELAI 479
I+ LF I+ F +P + L++L IV L + YF + + + + A+
Sbjct: 15 IVLGLFAGFTIYELWTVDLFLHPDLFFLYLLPPIV-LEAGYFMPNKAFISNITTISLFAV 73
Query: 480 LWVFMAAFAISCLKYIFRNFWE 545
M F SC + F+NF++
Sbjct: 74 AGTVMNIFLTSCFIFAFQNFYD 95
>Z68131-3|CAA92219.2| 480|Caenorhabditis elegans Hypothetical
protein B0395.1 protein.
Length = 480
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Frame = +3
Query: 306 ILFFLFPPVLIHLFQEYSKFFNPAINVLWVLLMIVGLSSAYFHATLSLVGQL--LDELAI 479
I+ LF I+ F +P + L++L IV L + YF + + + + A+
Sbjct: 15 IVLGLFAGFTIYELWTVDLFLHPDLFFLYLLPPIV-LEAGYFMPNKAFISNITTISLFAV 73
Query: 480 LWVFMAAFAISCLKYIFRNFWE 545
M F SC + F+NF++
Sbjct: 74 AGTVMNIFLTSCFIFAFQNFYD 95
>AF497823-1|AAM18101.1| 479|Caenorhabditis elegans putative Na-H
exchanger isoform 1 protein.
Length = 479
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Frame = +3
Query: 306 ILFFLFPPVLIHLFQEYSKFFNPAINVLWVLLMIVGLSSAYFHATLSLVGQL--LDELAI 479
I+ LF I+ F +P + L++L IV L + YF + + + + A+
Sbjct: 14 IVLGLFAGFTIYELWTVDLFLHPDLFFLYLLPPIV-LEAGYFMPNKAFISNITTISLFAV 72
Query: 480 LWVFMAAFAISCLKYIFRNFWE 545
M F SC + F+NF++
Sbjct: 73 AGTVMNIFLTSCFIFAFQNFYD 94
>U55369-1|AAK52175.1| 1247|Caenorhabditis elegans Cystic fibrosis
transmembrane conductanceregulator homolog protein 1
protein.
Length = 1247
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/73 (23%), Positives = 32/73 (43%)
Frame = -3
Query: 230 LPRSRCDHIV*INFDFKIHNVYQAICKIYYALTAFGDSFCCCIFNIYYAYILIKFYF*ST 51
L +C + V F +K ++ + K + + C IF Y + +L+K+ S
Sbjct: 58 LEEKQCSNRVMSGFKWKKRVIFSILMKFWKSFAGAFAFRMCAIFADYASILLLKYLIDSA 117
Query: 50 LKLYSSINFFLVA 12
+ NFF++A
Sbjct: 118 EISATLFNFFIIA 130
>DQ917240-1|ABI94563.1| 1797|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1797
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/43 (23%), Positives = 19/43 (44%)
Frame = +3
Query: 483 WVFMAAFAISCLKYIFRNFWEETGEYLALYSSVFSVMSTGFLV 611
W +SC+ +F + W TGE L + + + F++
Sbjct: 870 WAMATVTIVSCISMLFESPWPTTGENLVMNNGYLQISDYFFVL 912
>AY555271-1|AAS65871.2| 1831|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1831
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/43 (23%), Positives = 19/43 (44%)
Frame = +3
Query: 483 WVFMAAFAISCLKYIFRNFWEETGEYLALYSSVFSVMSTGFLV 611
W +SC+ +F + W TGE L + + + F++
Sbjct: 904 WAMATVTIVSCISMLFESPWPTTGENLVMNNGYLQISDYFFVL 946
>AF045640-6|AAU05588.1| 1562|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
a protein.
Length = 1562
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/43 (23%), Positives = 19/43 (44%)
Frame = +3
Query: 483 WVFMAAFAISCLKYIFRNFWEETGEYLALYSSVFSVMSTGFLV 611
W +SC+ +F + W TGE L + + + F++
Sbjct: 962 WAMATVTIVSCISMLFESPWPTTGENLVMNNGYLQISDYFFVL 1004
>AF045640-5|AAM81121.1| 1913|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
c protein.
Length = 1913
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/43 (23%), Positives = 19/43 (44%)
Frame = +3
Query: 483 WVFMAAFAISCLKYIFRNFWEETGEYLALYSSVFSVMSTGFLV 611
W +SC+ +F + W TGE L + + + F++
Sbjct: 1015 WAMATVTIVSCISMLFESPWPTTGENLVMNNGYLQISDYFFVL 1057
>AF045640-4|AAU05590.1| 1861|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
d protein.
Length = 1861
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/43 (23%), Positives = 19/43 (44%)
Frame = +3
Query: 483 WVFMAAFAISCLKYIFRNFWEETGEYLALYSSVFSVMSTGFLV 611
W +SC+ +F + W TGE L + + + F++
Sbjct: 934 WAMATVTIVSCISMLFESPWPTTGENLVMNNGYLQISDYFFVL 976
>Z81077-4|CAB03071.3| 618|Caenorhabditis elegans Hypothetical
protein F36A2.4 protein.
Length = 618
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/66 (25%), Positives = 29/66 (43%)
Frame = +3
Query: 480 LWVFMAAFAISCLKYIFRNFWEETGEYLALYSSVFSVMSTGFLVMHPAANAFALMTLALP 659
L VF F C+ +WE +LY S+++ GF + P+ +TLA
Sbjct: 230 LTVFFFVFVYGCIAAWVVRYWETWTYVESLYFIFISILTVGFGDIRPSPGNI-WVTLAFV 288
Query: 660 AMGFLV 677
+G ++
Sbjct: 289 VVGVIL 294
>Z35719-3|CAA84797.1| 347|Caenorhabditis elegans Hypothetical
protein F17C8.5 protein.
Length = 347
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +3
Query: 366 FNPAINVLWVLLMIVGLSSAYFHATLSLVGQLLDELAILWVFMA 497
F AI W L VG S Y H+TL + L ++ VF+A
Sbjct: 109 FGKAIFFSWTLYSTVGYGSLYPHSTLGRYLTIFYSLLMIPVFIA 152
>AF045640-7|AAU05589.1| 978|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
b protein.
Length = 978
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/36 (27%), Positives = 16/36 (44%)
Frame = +3
Query: 483 WVFMAAFAISCLKYIFRNFWEETGEYLALYSSVFSV 590
W +SC+ +F + W TGE L + + V
Sbjct: 928 WAMATVTIVSCISMLFESPWPTTGENLVMNNGYLQV 963
>Z49071-7|CAA88880.2| 211|Caenorhabditis elegans Hypothetical
protein T22C8.8 protein.
Length = 211
Score = 27.9 bits (59), Expect = 8.2
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Frame = +3
Query: 378 INVLWVLLMIVGLSSA--------YFHATLSLVGQLLDELAILWVFMAAFAISCLKYIFR 533
+ L + IVGLS + Y AT+ +L EL L +F AAF + Y R
Sbjct: 100 LTALSTIFNIVGLSKSDVRGKYRWYRIATMISGFSVLLELTALIMFPAAFYVKISDYGSR 159
Query: 534 NFWEETGEY-LALYSSVFSVMSTGFLV 611
WE Y +A +++F++ +T L+
Sbjct: 160 RNWEVDWSYGIAWGATLFTIGATIMLI 186
>U37548-10|AAR30210.1| 1418|Caenorhabditis elegans Calcium channel,
alpha subunitprotein 1, isoform f protein.
Length = 1418
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +3
Query: 273 LIAEFVNTVSNILFFLFPPVLIHLFQEYSKFFNPAINVLWVLLMIV 410
L+A VNT+S + + P ++ + EYS F A+ L +LL I+
Sbjct: 660 LVAILVNTLSMGVEYHQQPEILTVILEYSNLFFTALFALEMLLKII 705
>U37548-9|AAR25651.1| 1852|Caenorhabditis elegans Calcium channel,
alpha subunitprotein 1, isoform c protein.
Length = 1852
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +3
Query: 273 LIAEFVNTVSNILFFLFPPVLIHLFQEYSKFFNPAINVLWVLLMIV 410
L+A VNT+S + + P ++ + EYS F A+ L +LL I+
Sbjct: 660 LVAILVNTLSMGVEYHQQPEILTVILEYSNLFFTALFALEMLLKII 705
>U37548-8|AAM51534.1| 1837|Caenorhabditis elegans Calcium channel,
alpha subunitprotein 1, isoform a protein.
Length = 1837
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +3
Query: 273 LIAEFVNTVSNILFFLFPPVLIHLFQEYSKFFNPAINVLWVLLMIV 410
L+A VNT+S + + P ++ + EYS F A+ L +LL I+
Sbjct: 660 LVAILVNTLSMGVEYHQQPEILTVILEYSNLFFTALFALEMLLKII 705
>U37548-7|AAR25652.1| 1885|Caenorhabditis elegans Calcium channel,
alpha subunitprotein 1, isoform d protein.
Length = 1885
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +3
Query: 273 LIAEFVNTVSNILFFLFPPVLIHLFQEYSKFFNPAINVLWVLLMIV 410
L+A VNT+S + + P ++ + EYS F A+ L +LL I+
Sbjct: 660 LVAILVNTLSMGVEYHQQPEILTVILEYSNLFFTALFALEMLLKII 705
>U37548-6|AAR25653.1| 1844|Caenorhabditis elegans Calcium channel,
alpha subunitprotein 1, isoform e protein.
Length = 1844
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +3
Query: 273 LIAEFVNTVSNILFFLFPPVLIHLFQEYSKFFNPAINVLWVLLMIV 410
L+A VNT+S + + P ++ + EYS F A+ L +LL I+
Sbjct: 660 LVAILVNTLSMGVEYHQQPEILTVILEYSNLFFTALFALEMLLKII 705
>U28733-2|AAA68303.3| 381|Caenorhabditis elegans Hypothetical
protein C54A12.2 protein.
Length = 381
Score = 27.9 bits (59), Expect = 8.2
Identities = 22/101 (21%), Positives = 49/101 (48%), Gaps = 8/101 (7%)
Frame = +3
Query: 306 ILFFLFPPVLIHLFQEYSKFFNPAINVLWVLLMIVGLS----SAYFHATL---SLVGQLL 464
+++ LFP I S F+ + +++ +++GL S Y ++ S+VG LL
Sbjct: 64 LIWLLFPKSYIFREMMDSMDFHRIMAFVYLPTILIGLLGNLLSLYAYSRKNRKSMVGFLL 123
Query: 465 DELAILWVFMAAFAISCLKYIFRNFW-EETGEYLALYSSVF 584
L++ +F+ FA+ ++ W +E ++ Y++ +
Sbjct: 124 YSLSVSDIFLLVFALPLFSIMYLPIWTDEQRSFVVAYTAKY 164
>AY322480-1|AAP84337.1| 1844|Caenorhabditis elegans T-type voltage
sensitive calciumchannel alpha1 subunit isoform D
protein.
Length = 1844
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +3
Query: 273 LIAEFVNTVSNILFFLFPPVLIHLFQEYSKFFNPAINVLWVLLMIV 410
L+A VNT+S + + P ++ + EYS F A+ L +LL I+
Sbjct: 660 LVAILVNTLSMGVEYHQQPEILTVILEYSNLFFTALFALEMLLKII 705
>AY313900-1|AAP79883.1| 1852|Caenorhabditis elegans T-type calcium
channel alpha1 subunitisoform C protein.
Length = 1852
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +3
Query: 273 LIAEFVNTVSNILFFLFPPVLIHLFQEYSKFFNPAINVLWVLLMIV 410
L+A VNT+S + + P ++ + EYS F A+ L +LL I+
Sbjct: 660 LVAILVNTLSMGVEYHQQPEILTVILEYSNLFFTALFALEMLLKII 705
>AY313899-1|AAP79882.1| 1885|Caenorhabditis elegans T-type calcium
channel alpha1 subunitisoform B protein.
Length = 1885
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +3
Query: 273 LIAEFVNTVSNILFFLFPPVLIHLFQEYSKFFNPAINVLWVLLMIV 410
L+A VNT+S + + P ++ + EYS F A+ L +LL I+
Sbjct: 660 LVAILVNTLSMGVEYHQQPEILTVILEYSNLFFTALFALEMLLKII 705
>AY313898-1|AAP79881.1| 1837|Caenorhabditis elegans T-type calcium
channel alpha1 subunitisoform A protein.
Length = 1837
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +3
Query: 273 LIAEFVNTVSNILFFLFPPVLIHLFQEYSKFFNPAINVLWVLLMIV 410
L+A VNT+S + + P ++ + EYS F A+ L +LL I+
Sbjct: 660 LVAILVNTLSMGVEYHQQPEILTVILEYSNLFFTALFALEMLLKII 705
>AY275709-1|AAP31908.1| 211|Caenorhabditis elegans cell junction
protein VAB-9 protein.
Length = 211
Score = 27.9 bits (59), Expect = 8.2
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Frame = +3
Query: 378 INVLWVLLMIVGLSSA--------YFHATLSLVGQLLDELAILWVFMAAFAISCLKYIFR 533
+ L + IVGLS + Y AT+ +L EL L +F AAF + Y R
Sbjct: 100 LTALSTIFNIVGLSKSDVRGKYRWYRIATMISGFSVLLELTALIMFPAAFYVKISDYGSR 159
Query: 534 NFWEETGEY-LALYSSVFSVMSTGFLV 611
WE Y +A +++F++ +T L+
Sbjct: 160 RNWEVDWSYGIAWGATLFTIGATIMLI 186
>AF368920-1|AAK53427.1| 1837|Caenorhabditis elegans
voltage-dependent calcium channelalpha13 subunit
protein.
Length = 1837
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +3
Query: 273 LIAEFVNTVSNILFFLFPPVLIHLFQEYSKFFNPAINVLWVLLMIV 410
L+A VNT+S + + P ++ + EYS F A+ L +LL I+
Sbjct: 660 LVAILVNTLSMGVEYHQQPEILTVILEYSNLFFTALFALEMLLKII 705
>AF039716-1|AAY55879.1| 82|Caenorhabditis elegans Hypothetical
protein W03G9.8 protein.
Length = 82
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +3
Query: 273 LIAEFVNTVSNILFFLFPPVLIHLFQEYSKFFNP 374
L AE V++V + F+ F IHLFQ S +P
Sbjct: 22 LTAEQVSSVERVRFYRFSQYFIHLFQLLSLGVSP 55
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,043,741
Number of Sequences: 27780
Number of extensions: 410337
Number of successful extensions: 1112
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1110
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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