Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0226
(754 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g22330.1 68417.m03228 alkaline phytoceramidase family / aPHC ... 53 2e-07
At1g63110.3 68414.m07131 cell division cycle protein-related con... 31 1.1
At1g63110.2 68414.m07132 cell division cycle protein-related con... 31 1.1
At1g63110.1 68414.m07130 cell division cycle protein-related con... 31 1.1
At1g31600.3 68414.m03879 oxidoreductase, 2OG-Fe(II) oxygenase fa... 29 4.4
At1g31600.2 68414.m03877 oxidoreductase, 2OG-Fe(II) oxygenase fa... 29 4.4
At1g31600.1 68414.m03878 oxidoreductase, 2OG-Fe(II) oxygenase fa... 29 4.4
At5g61340.1 68418.m07697 expressed protein 28 7.7
At3g54830.1 68416.m06074 amino acid transporter family protein b... 28 7.7
At2g21470.2 68415.m02555 SUMO activating enzyme 2 (SAE2) nearly ... 28 7.7
At2g18800.1 68415.m02188 xyloglucan:xyloglucosyl transferase, pu... 28 7.7
>At4g22330.1 68417.m03228 alkaline phytoceramidase family / aPHC
family contains Pfam profile: PF05875: alkaline
phytoceramidase (aPHC)
Length = 255
Score = 53.2 bits (122), Expect = 2e-07
Identities = 34/115 (29%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
Frame = +3
Query: 252 INYSISPLIAEFVNTVSNILFFLFPPVLIHLFQEYSKFFNPAINVLWVLLMIVGLSSAYF 431
+NY+ S IAEF NT+SN+ L LI L + F ++L + MI+ + S +
Sbjct: 21 MNYAYSSYIAEFYNTISNVPGILL--ALIGLVNALRQRFEKRFSILHISNMILAIGSMLY 78
Query: 432 HATLSLVGQLLDELAILW-VFMAAFAISCLKYIFRNFWEETGEYLALYSSVFSVM 593
HATL V Q DE ++W + + + + + +R+ +L LY + F+++
Sbjct: 79 HATLQHVQQQSDETPMVWEILLYMYILYSPDWHYRS---TMPTFLFLYGAAFAIV 130
>At1g63110.3 68414.m07131 cell division cycle protein-related
contains 9 transmembrane domains; similar to PIG-U
(GI:27372215) [Rattus norvegicus]; similar to Cell
division cycle protein 91-like 1 (CDC91-like 1 protein)
(PIG-U) (Swiss-Prot:Q9H490) [Homo sapiens]
Length = 407
Score = 30.7 bits (66), Expect = 1.1
Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 2/82 (2%)
Frame = +3
Query: 303 NILFFLFPPVLIHLFQE--YSKFFNPAINVLWVLLMIVGLSSAYFHATLSLVGQLLDELA 476
NILF L P + I L + F AI+ + VG S+ Y V +LLD
Sbjct: 275 NILFMLLP-LAIRLKHRPCFLAFIYLAISSILKSYPSVGDSALYLSLWALFVNELLDMKF 333
Query: 477 ILWVFMAAFAISCLKYIFRNFW 542
++F IS L + N W
Sbjct: 334 SFFLFCGYLGISLLSPVMHNLW 355
>At1g63110.2 68414.m07132 cell division cycle protein-related
contains 9 transmembrane domains; similar to PIG-U
(GI:27372215) [Rattus norvegicus]; similar to Cell
division cycle protein 91-like 1 (CDC91-like 1 protein)
(PIG-U) (Swiss-Prot:Q9H490) [Homo sapiens]
Length = 397
Score = 30.7 bits (66), Expect = 1.1
Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 2/82 (2%)
Frame = +3
Query: 303 NILFFLFPPVLIHLFQE--YSKFFNPAINVLWVLLMIVGLSSAYFHATLSLVGQLLDELA 476
NILF L P + I L + F AI+ + VG S+ Y V +LLD
Sbjct: 265 NILFMLLP-LAIRLKHRPCFLAFIYLAISSILKSYPSVGDSALYLSLWALFVNELLDMKF 323
Query: 477 ILWVFMAAFAISCLKYIFRNFW 542
++F IS L + N W
Sbjct: 324 SFFLFCGYLGISLLSPVMHNLW 345
>At1g63110.1 68414.m07130 cell division cycle protein-related
contains 9 transmembrane domains; similar to PIG-U
(GI:27372215) [Rattus norvegicus]; similar to Cell
division cycle protein 91-like 1 (CDC91-like 1 protein)
(PIG-U) (Swiss-Prot:Q9H490) [Homo sapiens]
Length = 469
Score = 30.7 bits (66), Expect = 1.1
Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 2/82 (2%)
Frame = +3
Query: 303 NILFFLFPPVLIHLFQE--YSKFFNPAINVLWVLLMIVGLSSAYFHATLSLVGQLLDELA 476
NILF L P + I L + F AI+ + VG S+ Y V +LLD
Sbjct: 337 NILFMLLP-LAIRLKHRPCFLAFIYLAISSILKSYPSVGDSALYLSLWALFVNELLDMKF 395
Query: 477 ILWVFMAAFAISCLKYIFRNFW 542
++F IS L + N W
Sbjct: 396 SFFLFCGYLGISLLSPVMHNLW 417
>At1g31600.3 68414.m03879 oxidoreductase, 2OG-Fe(II) oxygenase
family protein contains Pfam profiles PF03171:
oxidoreductase, 2OG-Fe(II) oxygenase family, PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Length = 431
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -3
Query: 335 QHWWEQKEQNIAHSVNEFCYQRRYGIIDSHQSTGELP 225
+HW ++ + H EFCY R +D+ + GELP
Sbjct: 235 RHWIGLAKRRVQHYGYEFCYGTRN--VDTKKRLGELP 269
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -3
Query: 620 WMHYEKSSRHDRKYTGVQCQVFSCFLPKISENIF*ARNSKCCHKYPQYC 474
W HY + D+ V+ +V ++S + RN C KYPQYC
Sbjct: 381 WNHYIPHHKIDK----VKDKVIRRSSRRVSFTLRKVRNHPCSCKYPQYC 425
>At1g31600.2 68414.m03877 oxidoreductase, 2OG-Fe(II) oxygenase
family protein contains Pfam profiles PF03171:
oxidoreductase, 2OG-Fe(II) oxygenase family, PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Length = 344
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -3
Query: 335 QHWWEQKEQNIAHSVNEFCYQRRYGIIDSHQSTGELP 225
+HW ++ + H EFCY R +D+ + GELP
Sbjct: 148 RHWIGLAKRRVQHYGYEFCYGTRN--VDTKKRLGELP 182
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -3
Query: 620 WMHYEKSSRHDRKYTGVQCQVFSCFLPKISENIF*ARNSKCCHKYPQYC 474
W HY + D+ V+ +V ++S + RN C KYPQYC
Sbjct: 294 WNHYIPHHKIDK----VKDKVIRRSSRRVSFTLRKVRNHPCSCKYPQYC 338
>At1g31600.1 68414.m03878 oxidoreductase, 2OG-Fe(II) oxygenase
family protein contains Pfam profiles PF03171:
oxidoreductase, 2OG-Fe(II) oxygenase family, PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Length = 431
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -3
Query: 335 QHWWEQKEQNIAHSVNEFCYQRRYGIIDSHQSTGELP 225
+HW ++ + H EFCY R +D+ + GELP
Sbjct: 235 RHWIGLAKRRVQHYGYEFCYGTRN--VDTKKRLGELP 269
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -3
Query: 620 WMHYEKSSRHDRKYTGVQCQVFSCFLPKISENIF*ARNSKCCHKYPQYC 474
W HY + D+ V+ +V ++S + RN C KYPQYC
Sbjct: 381 WNHYIPHHKIDK----VKDKVIRRSSRRVSFTLRKVRNHPCSCKYPQYC 425
>At5g61340.1 68418.m07697 expressed protein
Length = 326
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/71 (23%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = -1
Query: 211 TTLFKLILILKYTMFIRQYV-KFITH*QPLEILFAAVYLIFTMPTYLLNFIFKAH*NCTV 35
++LF L L + + + YV K +++ + ++V+ + + TY+ NF F N +
Sbjct: 87 SSLFTLPFSLTFLLLSKAYVIKLLSNNHSADS--SSVFYLRLLKTYVCNFFFLLSANASA 144
Query: 34 VLIFFSSQNVV 2
+FF + N +
Sbjct: 145 FALFFLAYNTL 155
>At3g54830.1 68416.m06074 amino acid transporter family protein
belongs to INTERPRO:IPR002422 amino acid/polyamine
transporter, family II
Length = 546
Score = 27.9 bits (59), Expect = 7.7
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Frame = +3
Query: 297 VSNILFFLFPPVLIHLF-QEY--SKFFNPAI-NVLWVLLMIVGLSSAYFHATLSLVGQLL 464
+ + +LF L L Y S+F+ AI + L + ++VGL+ +F +SL+G L
Sbjct: 431 IQRLFIYLFAMSLEELIPSNYGKSRFYAIAIRSALAISTLLVGLAIPFFGLVMSLIGSFL 490
Query: 465 DELAIL 482
L L
Sbjct: 491 TMLIFL 496
>At2g21470.2 68415.m02555 SUMO activating enzyme 2 (SAE2) nearly
identical to SUMO activating enzyme 2 [Arabidopsis
thaliana] GI:22652854; contains Pfam profiles PF00899:
ThiF family, PF02134: Repeat in ubiquitin-activating
(UBA) protein
Length = 700
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +3
Query: 267 SPLIAEFVNTVSNILFFLFPPVLI-HLFQEYSKFFNPAINVLWVLLMIVGLSSAYFHATL 443
SP++ + TV ++ L + + H F +S+ NP +N +W L+++ FH T
Sbjct: 505 SPILNGSILTVEDLQQELSCKINVKHRF--FSEILNPVLNSVWFLIILPSTFPKLFHFTE 562
Query: 444 S 446
S
Sbjct: 563 S 563
>At2g18800.1 68415.m02188 xyloglucan:xyloglucosyl transferase,
putative / xyloglucan endotransglycosylase, putative /
endo-xyloglucan transferase, putative similar to
xyloglucan endotransglycosylase TCH4 GI:886116 from
[Arabidopsis thaliana]
Length = 305
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 225 WKLSGGLV*INYSISPLIAEFVN 293
W GGLV N+S P +A F+N
Sbjct: 196 WATRGGLVKTNWSQGPFVASFMN 218
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,697,782
Number of Sequences: 28952
Number of extensions: 365162
Number of successful extensions: 760
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 758
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1672953192
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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