Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0225
         (768 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    23   2.0  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    23   2.7  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    23   2.7  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    22   4.7  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    22   4.7  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   8.2  

>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +2

Query: 26  YIACSSVVIILMLLCRLPPAPVFVFGNGFPTLCIV 130
           YIACS+  I+  L     P   F+ G  F  L ++
Sbjct: 273 YIACSTPFILAQLWATWDPQSPFIDGPVFVILTLL 307


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 273 KRSVESNRHYYCK 311
           KRS+  NR Y CK
Sbjct: 63  KRSIRRNRQYVCK 75


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 273 KRSVESNRHYYCK 311
           KRS+  NR Y CK
Sbjct: 63  KRSIRRNRQYVCK 75


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 13/57 (22%), Positives = 26/57 (45%)
 Frame = +2

Query: 20  LHYIACSSVVIILMLLCRLPPAPVFVFGNGFPTLCIVCESAN*YMGNILDILVIKYY 190
           L Y++C   +IIL+L C    + V    N    + +  ++ N  +  ++  L   Y+
Sbjct: 294 LDYVSCVVALIILILQCGRVRSEVVKILNVLKKIALRRQTTNGDLDELIVTLSAHYF 350


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 13/57 (22%), Positives = 26/57 (45%)
 Frame = +2

Query: 20  LHYIACSSVVIILMLLCRLPPAPVFVFGNGFPTLCIVCESAN*YMGNILDILVIKYY 190
           L Y++C   +IIL+L C    + V    N    + +  ++ N  +  ++  L   Y+
Sbjct: 220 LDYVSCVVALIILILQCGRVRSEVVKILNVLKKIALRRQTTNGDLDELIVTLSTHYF 276


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/27 (29%), Positives = 12/27 (44%)
 Frame = -1

Query: 690 NYGKPINEITTLGYIWSLC*VKYQNLI 610
           N G P  E      IW  C   Y++++
Sbjct: 148 NQGMPTMEAIARSGIWENCRAAYEDIV 174


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,818
Number of Sequences: 336
Number of extensions: 3897
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20650031
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)