Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0225
         (768 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0293 + 2207782-2208148,2208515-2208567,2208622-2208698,220...    29   5.4  
01_05_0612 - 23652121-23652400,23653031-23654427                       28   9.4  

>11_01_0293 +
           2207782-2208148,2208515-2208567,2208622-2208698,
           2209377-2209772,2209953-2210111,2210522-2210933
          Length = 487

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
 Frame = +1

Query: 400 SMIEYSRSKHVSAVN---GQRKHHLLNCFSCIYIPTIFRIFEICNMFIFKHTHIVLLKYG 570
           +M+E  R+K V  V    G+ +   L C   + +P    IFE+    I KH   ++ K+ 
Sbjct: 171 NMLEKLRNKRVVFVGDSIGRNQWESLLCMLSVAVPDKSSIFEVNGNPITKHMGFLIFKFR 230

Query: 571 AVSC 582
             +C
Sbjct: 231 DYNC 234


>01_05_0612 - 23652121-23652400,23653031-23654427
          Length = 558

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 133 TNYTERRKAIPENEDRCWWQT 71
           TN+     A  E++D CWW+T
Sbjct: 226 TNWLRIHHAAGEDQDLCWWET 246


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,652,954
Number of Sequences: 37544
Number of extensions: 324131
Number of successful extensions: 563
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 563
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2063219900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)